RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 HSD17B4P51659 736 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 ZNF157P51786 506 aaPredicted RBP8.72□□□□□ -1.01
TDP1-209ENST00000554180 TMEM132BQ14DG7 1078 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 UBE2SQ16763 222 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 INF2Q27J81 1249 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 KLHL40Q2TBA0 621 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 JAKMIP3Q5VZ66 844 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 ARL6IP4Q66PJ3 421 aaKnown RBP8.72□□□□□ -1.01
TDP1-209ENST00000554180 SNRNP48Q6IEG0 339 aaKnown RBP8.72□□□□□ -1.01
TDP1-209ENST00000554180 RGMBQ6NW40 437 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 USP17L6PQ6QN14 398 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.72□□□□□ -1.01
TDP1-209ENST00000554180 RIOX2Q8IUF8 465 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 CPXCR1Q8N123 301 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 CHST13Q8NET6 341 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 TBCKQ8TEA7 893 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 CRYGNQ8WXF5 182 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 CLEC4DQ8WXI8 215 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 BRI3BPQ8WY22 251 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 CCDC102AQ96A19 550 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 P2RX7Q99572 595 aaKnown RBP8.72□□□□□ -1.01
TDP1-209ENST00000554180 ANO3Q9BYT9 981 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 FTOQ9C0B1 505 aaKnown RBP eCLIP8.72□□□□□ -1.01
TDP1-209ENST00000554180 EHMT1Q9H9B1 1298 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.72□□□□□ -1.01
TDP1-209ENST00000554180 FBXO40Q9UH90 709 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 RABGAP1Q9Y3P9 1069 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 PCDHB6Q9Y5E3 794 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 CLIC4Q9Y696 253 aa8.72□□□□□ -1.01
TDP1-209ENST00000554180 A0A1W2PQ27 194 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 A0A1W2PQ64 194 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 A0A1W2PQD8 194 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 GOLGA6L4A6NEF3 574 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 SLC25A27O95847 323 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 CFBP00751 764 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 YY1P25490 414 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 PRPHP41219 470 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 ME1P48163 572 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 GCLCP48506 637 aaPredicted RBP8.71□□□□□ -1.02
TDP1-209ENST00000554180 USP11P51784 963 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 INHBEP58166 350 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 ATP2C1P98194 919 aaPredicted RBP8.71□□□□□ -1.02
TDP1-209ENST00000554180 CEBPZQ03701 1054 aaKnown RBP8.71□□□□□ -1.02
TDP1-209ENST00000554180 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.02
TDP1-209ENST00000554180 ADALQ6DHV7 355 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 PPP4R3AQ6IN85 833 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 KRI1Q8N9T8 703 aaKnown RBP8.71□□□□□ -1.02
TDP1-209ENST00000554180 FERMT2Q96AC1 680 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 TRERF1Q96PN7 1200 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 PARK7Q99497 189 aaKnown RBP8.71□□□□□ -1.02
TDP1-209ENST00000554180 SPATC1LQ9H0A9 340 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 ACAD9Q9H845 621 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 RNF146Q9NTX7 359 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 TMEM260Q9NX78 707 aa8.71□□□□□ -1.02
TDP1-209ENST00000554180 CYP3A7-CYP3A51PA0A087WV96 503 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 BTBD19C9JJ37 291 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 PDHXO00330 501 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 NFIBO00712 420 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 CYP3A4P08684 503 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 PTPREP23469 700 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 CYP3A7P24462 503 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 HOXA13P31271 388 aaPredicted RBP8.7□□□□□ -1.02
TDP1-209ENST00000554180 CIITAP33076 1130 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 ARHGAP4P98171 946 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 NBR1Q14596 966 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 ZNF579Q8NAF0 562 aaKnown RBP8.7□□□□□ -1.02
TDP1-209ENST00000554180 ZNF784Q8NCA9 323 aaPredicted RBP8.7□□□□□ -1.02
TDP1-209ENST00000554180 SHCBP1Q8NEM2 672 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 SMCR8Q8TEV9 937 aaPredicted RBP8.7□□□□□ -1.02
TDP1-209ENST00000554180 PGBD1Q96JS3 809 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 MBOAT7Q96N66 472 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 PCDHA7Q9UN72 937 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 SRPRBQ9Y5M8 271 aaKnown RBP8.7□□□□□ -1.02
TDP1-209ENST00000554180 DDX49Q9Y6V7 483 aaKnown RBP8.7□□□□□ -1.02
TDP1-209ENST00000554180 PFASO15067 1338 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 FRMPD4Q14CM0 1322 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 RPTORQ8N122 1335 aa8.7□□□□□ -1.02
TDP1-209ENST00000554180 FAM155AB1AL88 458 aaPredicted RBP8.69□□□□□ -1.02
TDP1-209ENST00000554180 WNT7AO00755 349 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 TRAK2O60296 914 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 NEMFO60524 1076 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 CCNT1O60563 726 aaKnown RBP8.69□□□□□ -1.02
TDP1-209ENST00000554180 CUTAO60888 179 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 CNMDO75829 334 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 OR52Z1P0C646 297 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 TAL1P17542 331 aaPredicted RBP8.69□□□□□ -1.02
TDP1-209ENST00000554180 ATP2B1P20020 1258 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 MCM7P33993 719 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 RPS6P62753 249 aaKnown RBP8.69□□□□□ -1.02
TDP1-209ENST00000554180 CCNA1P78396 465 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 SREBF2Q12772 1141 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 PTGDRQ13258 359 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 PLS1Q14651 629 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 ZNF174Q15697 407 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 LETM2Q2VYF4 491 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 MUM1L1Q5H9M0 696 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 AXDND1Q5T1B0 1012 aaPredicted RBP8.69□□□□□ -1.02
TDP1-209ENST00000554180 XRRA1Q6P2D8 792 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 POTEEQ6S8J3 1075 aa8.69□□□□□ -1.02
TDP1-209ENST00000554180 RNF207Q6ZRF8 634 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms