RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 PIK3CDO00329 1044 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 YEATS4O95619 227 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 SLC10A3P09131 477 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 GCLCP48506 637 aaPredicted RBP11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 SREBF2Q12772 1141 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 MOGSQ13724 837 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 TMEM132BQ14DG7 1078 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 SKOR2Q2VWA4 1001 aaPredicted RBP11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 TTC38Q5R3I4 469 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 NEK8Q86SG6 692 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 CHST13Q8NET6 341 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 RASGRP4Q8TDF6 673 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 BRI3BPQ8WY22 251 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 TNFRSF25Q93038 417 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 USP28Q96RU2 1077 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 PARK7Q99497 189 aaKnown RBP11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 PAGR1Q9BTK6 254 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 HOMER2Q9NSB8 354 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 RNF146Q9NTX7 359 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 RCOR1Q9UKL0 485 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 RABGAP1Q9Y3P9 1069 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 BTBD19C9JJ37 291 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 SLC25A27O95847 323 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 NASPP49321 788 aaPredicted RBP11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 CLK2P49760 499 aaKnown RBP11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 CCNA1P78396 465 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 ORC2Q13416 577 aaPredicted RBP11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 UBE2SQ16763 222 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 INF2Q27J81 1249 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 USP17L6PQ6QN14 398 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 FCHSD1Q86WN1 690 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 CCAR1Q8IX12 1150 aaKnown RBP11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 REPS2Q8NFH8 660 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 LEO1Q8WVC0 666 aaPredicted RBP11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 ACAD9Q9H845 621 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 GDPD2Q9HCC8 539 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 ZCCHC17Q9NP64 241 aaKnown RBP11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 TMEM260Q9NX78 707 aa11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 ZNF214Q9UL59 606 aaPredicted RBP11.92□□□□□ -0.5
TMEM55B-205ENST00000554028 ELP1O95163 1332 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 MEIS2O14770 477 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 SPTLC2O15270 562 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 ME1P48163 572 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 USP11P51784 963 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 SLC39A14Q15043 492 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 LETM2Q2VYF4 491 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 NSMFQ6X4W1 530 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 RIOX2Q8IUF8 465 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 TMEM87AQ8NBN3 555 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 LINC00301Q8NCQ3 95 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 ANO3Q9BYT9 981 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 SPATC1LQ9H0A9 340 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 CREBZFQ9NS37 354 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 FARP1Q9Y4F1 1045 aaPredicted RBP11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 CLIC4Q9Y696 253 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
TMEM55B-205ENST00000554028 OTOFQ9HC10 1997 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 LAD1O00515 517 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 MARCH6O60337 910 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 CCNT1O60563 726 aaKnown RBP11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 PPP6R2O75170 966 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 HOXA13P31271 388 aaPredicted RBP11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 MCM7P33993 719 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 ZNF76P36508 570 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 TOB1P50616 345 aaPredicted RBP11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 HSD17B4P51659 736 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 APLP1P51693 650 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 UBE2HP62256 183 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 GRM1Q13255 1194 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 ZNF174Q15697 407 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 DEFB115Q30KQ5 88 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 EARS2Q5JPH6 523 aaKnown RBP11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 NCAPG2Q86XI2 1143 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 GPRC5AQ8NFJ5 357 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 CLEC4DQ8WXI8 215 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 CHAMP1Q96JM3 812 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 MROH8Q9H579 483 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 BAZ2BQ9UIF8 2168 aaKnown RBP11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 PCDHB6Q9Y5E3 794 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
TMEM55B-205ENST00000554028 FAM205CA6NFA0 338 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 B4DLN1 442 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 NFIBO00712 420 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 OPLAHO14841 1288 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 MBD3O95983 291 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 CYP2C8P10632 490 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 GHRHRQ02643 423 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 NOGQ13253 232 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 MUM1L1Q5H9M0 696 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 ANKRD35Q8N283 1001 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 FAM43AQ8N2R8 423 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 PGBD1Q96JS3 809 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 FTOQ9C0B1 505 aaKnown RBP eCLIP11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 LMBRD1Q9NUN5 540 aa11.89□□□□□ -0.51
TMEM55B-205ENST00000554028 BTBD7Q9P203 1132 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms