RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 TRIM43BA6NCK2 446 aa6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 IGFBP4P22692 258 aa6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 NRG1Q02297 640 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TEAD4Q15561 434 aa6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 GRIK5Q16478 980 aa6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 MAP7D1Q3KQU3 841 aa6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 NOL9Q5SY16 702 aaKnown RBP6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 FKBP1CQ5VVH2 108 aa6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 FAM83AQ86UY5 434 aa6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TRIM43Q96BQ3 446 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 PRKRIP1Q9H875 184 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 ZNF112Q9UJU3 913 aa6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 ZDBF2Q9HCK1 2354 aa6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CHD7Q9P2D1 2997 aa6.99□□□□□ -1.29
SMARCE1P3-201ENST00000553649 KMT2BQ9UMN6 2715 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 ITGB8P26012 769 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CCND3P30281 292 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 INPP5BP32019 993 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 NOS2P35228 1153 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 EPHA4P54764 986 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TBCELQ5QJ74 424 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 SLC4A10Q6U841 1118 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 MIGA2Q7L4E1 593 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 WWC1Q8IX03 1113 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TDRD7Q8NHU6 1098 aaKnown RBP6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 FAM84BQ96KN1 310 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 UIMC1Q96RL1 719 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 PBX4Q9BYU1 374 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 PUS3Q9BZE2 481 aaKnown RBP6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 PDLIM7Q9NR12 457 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 C9orf78Q9NZ63 289 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TMOD2Q9NZR1 351 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 ATP11BQ9Y2G3 1177 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 DAGLAQ9Y4D2 1042 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 BAHCC1Q9P281 2608 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 WDFY4Q6ZS81 3184 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 FANCIQ9NVI1 1328 aa6.98□□□□□ -1.29
SMARCE1P3-201ENST00000553649 EPG5Q9HCE0 2579 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 A0A0G2JLL6 359 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 GRXCR1A8MXD5 290 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 GRM8O00222 908 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CXCL11O14625 94 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 MGAMO43451 1857 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 LILRB5O75023 590 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 CACNB2Q08289 660 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 FAM110CQ1W6H9 321 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 BEND3Q5T5X7 828 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 MCTP1Q6DN14 999 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 ERMP1Q7Z2K6 904 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 PRRT2Q7Z6L0 340 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 UBE2Q2Q8WVN8 375 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TEKT1Q969V4 418 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 HOOK2Q96ED9 719 aa6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 PRDM5Q9NQX1 630 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 TCF20Q9UGU0 1960 aaKnown RBP6.97□□□□□ -1.29
SMARCE1P3-201ENST00000553649 REV3LO60673 3130 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 PIK3CDO00329 1044 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 VAMP4O75379 141 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ABL2P42684 1182 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 HDLBPQ00341 1268 aaKnown RBP6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 EXOSC9Q06265 439 aaKnown RBP6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 UBE4AQ14139 1066 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CCDC184Q52MB2 194 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 METTL24Q5JXM2 366 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 DCAF15Q66K64 600 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ANKRD13CQ8N6S4 541 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZNF341Q9BYN7 854 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZNF358Q9NW07 568 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CHD8Q9HCK8 2581 aa6.96□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CACNA1BQ00975 2339 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 TCP10Q12799 353 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SNX17Q15036 470 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 TRIM60Q495X7 471 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CAVIN4Q5BKX8 364 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 LCE1DQ5T752 114 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 APOBEC3HQ6NTF7 200 aaKnown RBP6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 FBXO33Q7Z6M2 555 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SLC9A9Q8IVB4 645 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 PRSS33Q8NF86 280 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 TBC1D22AQ8WUA7 517 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 HERVK_113Q902F9 699 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CLUAP1Q96AJ1 413 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SUCLG2Q96I99 432 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 MRIQ9BWK5 157 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 PRM3Q9NNZ6 103 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 MROH5Q6ZUA9 1318 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ATRNL1Q5VV63 1379 aa6.95□□□□□ -1.3
SMARCE1P3-201ENST00000553649 LRRC37A2A6NM11 1700 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 NBPF7P0C2Y1 421 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 XRCC5P13010 732 aaKnown RBP6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CYP2B6P20813 491 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 ZEB1P37275 1124 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 AFF1P51825 1210 aaKnown RBP6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 CCDC27Q2M243 656 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 LRRC24Q50LG9 513 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 RASIP1Q5U651 963 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 SLC39A5Q6ZMH5 540 aa6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 FASTKD5Q7L8L6 764 aaKnown RBP6.94□□□□□ -1.3
SMARCE1P3-201ENST00000553649 FMR1NBQ8N0W7 255 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms