RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 SLITRK4Q8IW52 837 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 TP53INP2Q8IXH6 220 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 SEC16BQ96JE7 1060 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 SPATA32Q96LK8 384 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 LRRC3Q9BY71 257 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 EFR3BQ9Y2G0 817 aa6.26□□□□□ -1.41
ATXN3-222ENST00000553570 CRB1P82279 1406 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 NFAT5O94916 1531 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 TMEM265A0A087WTH1 108 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 PRR33A8MZF0 331 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 ATP2B1P20020 1258 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 SOX9P48436 509 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 NASPP49321 788 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-222ENST00000553570 MPP2Q14168 576 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 SEZ6Q53EL9 994 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 MCATQ8IVS2 390 aaKnown RBP6.25□□□□□ -1.41
ATXN3-222ENST00000553570 DHX38Q92620 1227 aaKnown RBP6.25□□□□□ -1.41
ATXN3-222ENST00000553570 NKD1Q969G9 470 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 ACSF2Q96CM8 615 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-222ENST00000553570 TMEM87BQ96K49 555 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATXN3-222ENST00000553570 ADAM30Q9UKF2 790 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 MAPK8IP1Q9UQF2 711 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 THRAP3Q9Y2W1 955 aaKnown RBP6.25□□□□□ -1.41
ATXN3-222ENST00000553570 CORINQ9Y5Q5 1042 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 COL5A2P05997 1499 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-222ENST00000553570 FAM208AQ9UK61 1670 aaKnown RBP6.25□□□□□ -1.41
ATXN3-222ENST00000553570 PEAK1Q9H792 1746 aa6.25□□□□□ -1.41
ATXN3-222ENST00000553570 CDK12Q9NYV4 1490 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-222ENST00000553570 PGRP06401 933 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 ZNF865P0CJ78 1059 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-222ENST00000553570 IL2RBP14784 551 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 ITIH2P19823 946 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 FUT4P22083 530 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 AOC3Q16853 763 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 NBPF6Q5VWK0 638 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 SLC6A19Q695T7 634 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 LETMD1Q6P1Q0 360 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 AGBL5Q8NDL9 886 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 RAPGEF4Q8WZA2 1011 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 UBXN4Q92575 508 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 SYTL4Q96C24 671 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-222ENST00000553570 NBPF4Q96M43 638 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 MIPEPQ99797 713 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 PRDM5Q9NQX1 630 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-222ENST00000553570 POLKQ9UBT6 870 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 POLR3KQ9Y2Y1 108 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-222ENST00000553570 ITGB4P16144 1822 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 RGPD1P0DJD0 1748 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 PARP4Q9UKK3 1724 aaKnown RBP6.24□□□□□ -1.41
ATXN3-222ENST00000553570 OVOS2A0A0J9YW53 1432 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 OVOS2Q6IE36 1432 aa6.24□□□□□ -1.41
ATXN3-222ENST00000553570 SMG6Q86US8 1419 aaKnown RBP6.24□□□□□ -1.41
ATXN3-222ENST00000553570 GTF2F1P35269 517 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATXN3-222ENST00000553570 MTHFSP49914 203 aa6.23□□□□□ -1.41
ATXN3-222ENST00000553570 COL9A2Q14055 689 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-222ENST00000553570 CWF19L2Q2TBE0 894 aaKnown RBP6.23□□□□□ -1.41
ATXN3-222ENST00000553570 TMEM201Q5SNT2 666 aa6.23□□□□□ -1.41
ATXN3-222ENST00000553570 REC114Q7Z4M0 266 aa6.23□□□□□ -1.41
ATXN3-222ENST00000553570 DEFB132Q7Z7B7 95 aa6.23□□□□□ -1.41
ATXN3-222ENST00000553570 ZCRB1Q8TBF4 217 aaKnown RBP6.23□□□□□ -1.41
ATXN3-222ENST00000553570 PPP1R13LQ8WUF5 828 aa6.23□□□□□ -1.41
ATXN3-222ENST00000553570 HRASLS5Q96KN8 279 aa6.23□□□□□ -1.41
ATXN3-222ENST00000553570 DPH2Q9BQC3 489 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-222ENST00000553570 BRMS1Q9HCU9 246 aa6.23□□□□□ -1.41
ATXN3-222ENST00000553570 SEMA3GQ9NS98 782 aa6.23□□□□□ -1.41
ATXN3-222ENST00000553570 ADAMTS6Q9UKP5 1117 aa6.23□□□□□ -1.41
ATXN3-222ENST00000553570 U2SURPO15042 1029 aaKnown RBP6.22□□□□□ -1.41
ATXN3-222ENST00000553570 BPNT1O95861 308 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 ITGB5P18084 799 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 PDE4BQ07343 736 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 ARHGAP27Q6ZUM4 889 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 MARCH10Q8NA82 808 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-222ENST00000553570 DNAJB8Q8NHS0 232 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 XAGE3Q8WTP9 111 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 ARMC5Q96C12 935 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 FMNL2Q96PY5 1086 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 MBNL3Q9NUK0 354 aaKnown RBP6.22□□□□□ -1.41
ATXN3-222ENST00000553570 PPT2Q9UMR5 302 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 CAPN6Q9Y6Q1 641 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 BLMP54132 1417 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-222ENST00000553570 PITPNM2Q9BZ72 1349 aa6.22□□□□□ -1.41
ATXN3-222ENST00000553570 FLT4P35916 1363 aa6.21□□□□□ -1.41
ATXN3-222ENST00000553570 THSD7AQ9UPZ6 1657 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 BTBD11A6QL63 1104 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 MCM4P33991 863 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 CLCQ05315 142 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 EIF4A2Q14240 407 aaKnown RBP6.21□□□□□ -1.42
ATXN3-222ENST00000553570 ZNF792Q3KQV3 632 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 SFRP5Q5T4F7 317 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 CDH24Q86UP0 819 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 CFAP53Q96M91 514 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 DNAJC2Q99543 621 aaKnown RBP6.21□□□□□ -1.42
ATXN3-222ENST00000553570 ST14Q9Y5Y6 855 aa6.21□□□□□ -1.42
ATXN3-222ENST00000553570 LRRC37A3O60309 1634 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms