RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ASPRV1Q53RT3 343 aa21.29■■□□□ 1
SHMT2-206ENST00000553529 TLK2Q86UE8 772 aa21.29■■□□□ 1
SHMT2-206ENST00000553529 PIBF1Q8WXW3 757 aa21.29■■□□□ 1
SHMT2-206ENST00000553529 LRRC2Q9BYS8 371 aa21.29■■□□□ 1
SHMT2-206ENST00000553529 STARD7Q9NQZ5 370 aa21.29■■□□□ 1
SHMT2-206ENST00000553529 SLC27A2O14975 620 aa21.28■■□□□ 1
SHMT2-206ENST00000553529 DYNC1LI2O43237 492 aaPredicted RBP21.28■■□□□ 1
SHMT2-206ENST00000553529 CYTH3O43739 400 aa21.28■■□□□ 1
SHMT2-206ENST00000553529 EPHB4P54760 987 aa21.28■■□□□ 1
SHMT2-206ENST00000553529 GNASQ5JWF2 1037 aa21.28■■□□□ 1
SHMT2-206ENST00000553529 C9orf50Q5SZB4 431 aa21.28■■□□□ 1
SHMT2-206ENST00000553529 CXCL17Q6UXB2 119 aa21.28■■□□□ 1
SHMT2-206ENST00000553529 KIAA1211Q6ZU35 1233 aa21.28■■□□□ 1
SHMT2-206ENST00000553529 MORC4Q8TE76 937 aa21.28■■□□□ 1
SHMT2-206ENST00000553529 TAAR1Q96RJ0 339 aa21.28■■□□□ 1
SHMT2-206ENST00000553529 PALM3A6NDB9 673 aaPredicted RBP21.27■■□□□ 1
SHMT2-206ENST00000553529 KLRF2D3W0D1 207 aa21.27■■□□□ 1
SHMT2-206ENST00000553529 RXRAP19793 462 aa21.27■■□□□ 1
SHMT2-206ENST00000553529 PSMC6P62333 389 aa21.27■■□□□ 1
SHMT2-206ENST00000553529 GRM4Q14833 912 aa21.27■■□□□ 1
SHMT2-206ENST00000553529 CCDC178Q5BJE1 867 aa21.27■■□□□ 1
SHMT2-206ENST00000553529 RALYLQ86SE5 291 aaKnown RBP21.27■■□□□ 1
SHMT2-206ENST00000553529 HOMER1Q86YM7 354 aa21.27■■□□□ 1
SHMT2-206ENST00000553529 TDHQ8IZJ6 230 aa21.27■■□□□ 1
SHMT2-206ENST00000553529 NCOA7Q8NI08 942 aa21.27■■□□□ 1
SHMT2-206ENST00000553529 IGDCC4Q8TDY8 1250 aa21.27■■□□□ 1
SHMT2-206ENST00000553529 ZFP91Q96JP5 570 aaPredicted RBP21.27■■□□□ 1
SHMT2-206ENST00000553529 ARIH2O95376 493 aa21.26■□□□□ 0.99
SHMT2-206ENST00000553529 CST5P28325 142 aaPredicted RBP21.26■□□□□ 0.99
SHMT2-206ENST00000553529 FAAP100Q0VG06 881 aa21.26■□□□□ 0.99
SHMT2-206ENST00000553529 TRDNQ13061 729 aa21.26■□□□□ 0.99
SHMT2-206ENST00000553529 TMEM67Q5HYA8 995 aa21.26■□□□□ 0.99
SHMT2-206ENST00000553529 Q7L0L9 218 aa21.26■□□□□ 0.99
SHMT2-206ENST00000553529 SYTL5Q8TDW5 730 aaPredicted RBP21.26■□□□□ 0.99
SHMT2-206ENST00000553529 PIGSQ96S52 555 aa21.26■□□□□ 0.99
SHMT2-206ENST00000553529 ANO2Q9NQ90 1003 aa21.26■□□□□ 0.99
SHMT2-206ENST00000553529 GRIN2DO15399 1336 aa21.26■□□□□ 0.99
SHMT2-206ENST00000553529 BAZ2BQ9UIF8 2168 aaKnown RBP21.26■□□□□ 0.99
SHMT2-206ENST00000553529 CLTBP09497 229 aa21.25■□□□□ 0.99
SHMT2-206ENST00000553529 TROAPQ12815 778 aa21.25■□□□□ 0.99
SHMT2-206ENST00000553529 WTAPQ15007 396 aa21.25■□□□□ 0.99
SHMT2-206ENST00000553529 C1orf53Q5VUE5 145 aa21.25■□□□□ 0.99
SHMT2-206ENST00000553529 CREB3L3Q68CJ9 461 aa21.25■□□□□ 0.99
SHMT2-206ENST00000553529 CMTR1Q8N1G2 835 aaKnown RBP21.25■□□□□ 0.99
SHMT2-206ENST00000553529 TCEANC2Q96MN5 208 aa21.25■□□□□ 0.99
SHMT2-206ENST00000553529 TSEN34Q9BSV6 310 aaKnown RBP21.25■□□□□ 0.99
SHMT2-206ENST00000553529 LY9Q9HBG7 655 aa21.25■□□□□ 0.99
SHMT2-206ENST00000553529 EDNRBP24530 442 aa21.24■□□□□ 0.99
SHMT2-206ENST00000553529 HOXA13P31271 388 aaPredicted RBP21.24■□□□□ 0.99
SHMT2-206ENST00000553529 NECTIN1Q15223 517 aa21.24■□□□□ 0.99
SHMT2-206ENST00000553529 SHHQ15465 462 aa21.24■□□□□ 0.99
SHMT2-206ENST00000553529 FSCN1Q16658 493 aaKnown RBP21.24■□□□□ 0.99
SHMT2-206ENST00000553529 BMP2KLQ5H9B9 411 aa21.24■□□□□ 0.99
SHMT2-206ENST00000553529 FBXO11Q86XK2 927 aa21.24■□□□□ 0.99
SHMT2-206ENST00000553529 NUP133Q8WUM0 1156 aa21.24■□□□□ 0.99
SHMT2-206ENST00000553529 VTI1AQ96AJ9 217 aa21.24■□□□□ 0.99
SHMT2-206ENST00000553529 MTMR8Q96EF0 704 aa21.24■□□□□ 0.99
SHMT2-206ENST00000553529 VTA1Q9NP79 307 aa21.24■□□□□ 0.99
SHMT2-206ENST00000553529 ABCB11O95342 1321 aa21.24■□□□□ 0.99
SHMT2-206ENST00000553529 MOXD2PA6NHM9 499 aa21.23■□□□□ 0.99
SHMT2-206ENST00000553529 PRC1O43663 620 aa21.23■□□□□ 0.99
SHMT2-206ENST00000553529 LBHD1Q9BQE6 289 aaPredicted RBP21.23■□□□□ 0.99
SHMT2-206ENST00000553529 WDR11Q9BZH6 1224 aa21.23■□□□□ 0.99
SHMT2-206ENST00000553529 PRKAG2Q9UGJ0 569 aa21.23■□□□□ 0.99
SHMT2-206ENST00000553529 PLEKHA8P1O95397 391 aa21.22■□□□□ 0.99
SHMT2-206ENST00000553529 CFBP00751 764 aa21.22■□□□□ 0.99
SHMT2-206ENST00000553529 EIF2AK2P19525 551 aaKnown RBP21.22■□□□□ 0.99
SHMT2-206ENST00000553529 CDK7P50613 346 aa21.22■□□□□ 0.99
SHMT2-206ENST00000553529 PDE4DQ08499 809 aa21.22■□□□□ 0.99
SHMT2-206ENST00000553529 RASEFQ8IZ41 740 aa21.22■□□□□ 0.99
SHMT2-206ENST00000553529 IL31RAQ8NI17 732 aa21.22■□□□□ 0.99
SHMT2-206ENST00000553529 GLT1D1Q96MS3 346 aa21.22■□□□□ 0.99
SHMT2-206ENST00000553529 ADD3Q9UEY8 706 aaKnown RBP21.22■□□□□ 0.99
SHMT2-206ENST00000553529 UMODL1Q5DID0 1318 aa21.22■□□□□ 0.99
SHMT2-206ENST00000553529 A0A1W2PPC1 479 aa21.21■□□□□ 0.99
SHMT2-206ENST00000553529 SH2B2O14492 632 aaPredicted RBP21.21■□□□□ 0.99
SHMT2-206ENST00000553529 SORBS3O60504 671 aa21.21■□□□□ 0.99
SHMT2-206ENST00000553529 NKX3-2P78367 333 aa21.21■□□□□ 0.99
SHMT2-206ENST00000553529 ADCK5Q3MIX3 580 aa21.21■□□□□ 0.99
SHMT2-206ENST00000553529 DUSP28Q4G0W2 176 aa21.21■□□□□ 0.99
SHMT2-206ENST00000553529 IQSEC1Q6DN90 963 aa21.21■□□□□ 0.99
SHMT2-206ENST00000553529 ANKRD33Q7Z3H0 272 aa21.21■□□□□ 0.99
SHMT2-206ENST00000553529 ZNF654Q8IZM8 581 aa21.21■□□□□ 0.99
SHMT2-206ENST00000553529 CCDC136Q96JN2 1154 aa21.21■□□□□ 0.99
SHMT2-206ENST00000553529 TMEM39AQ9NV64 488 aa21.21■□□□□ 0.99
SHMT2-206ENST00000553529 hCG_1642624A0A1W2PR95 340 aa21.2■□□□□ 0.98
SHMT2-206ENST00000553529 RBM47A0AV96 593 aaKnown RBP21.2■□□□□ 0.98
SHMT2-206ENST00000553529 ZBTB5O15062 677 aa21.2■□□□□ 0.98
SHMT2-206ENST00000553529 NT5C2P49902 561 aa21.2■□□□□ 0.98
SHMT2-206ENST00000553529 SEPT14Q6ZU15 432 aa21.2■□□□□ 0.98
SHMT2-206ENST00000553529 FAM126BQ8IXS8 530 aa21.2■□□□□ 0.98
SHMT2-206ENST00000553529 PCSK9Q8NBP7 692 aaKnown RBP21.2■□□□□ 0.98
SHMT2-206ENST00000553529 PPP1R12CQ9BZL4 782 aa21.2■□□□□ 0.98
SHMT2-206ENST00000553529 AP5M1Q9H0R1 490 aa21.2■□□□□ 0.98
SHMT2-206ENST00000553529 RIOX1Q9H6W3 641 aa21.2■□□□□ 0.98
SHMT2-206ENST00000553529 SPC25Q9HBM1 224 aa21.2■□□□□ 0.98
SHMT2-206ENST00000553529 TBX21Q9UL17 535 aa21.2■□□□□ 0.98
SHMT2-206ENST00000553529 A0A0U1RQG5 324 aaPredicted RBP21.19■□□□□ 0.98
SHMT2-206ENST00000553529 ERICH2A1L162 156 aa21.19■□□□□ 0.98
SHMT2-206ENST00000553529 ARVCFO00192 962 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms