RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 M0R2N6 131 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 STXBP3O00186 592 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 IKBKBO14920 756 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 C21orf2O43822 256 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 ADCY5O95622 1261 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 PDHBP11177 359 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 MSNP26038 577 aaKnown RBP8.32□□□□□ -1.08
ATXN3-221ENST00000553498 CDC25BP30305 580 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 SHMT1P34896 483 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 LONP1P36776 959 aaKnown RBP8.32□□□□□ -1.08
ATXN3-221ENST00000553498 PRPHP41219 470 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 SCNN1DP51172 638 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 RBM5P52756 815 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATXN3-221ENST00000553498 NLRP12P59046 1061 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 TTC38Q5R3I4 469 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 KRBA2Q6ZNG9 492 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 TMEM179Q6ZVK1 233 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 KIAA0825Q8IV33 1275 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 CNNM3Q8NE01 707 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 DCAF4Q8WV16 495 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 NAP1L4Q99733 375 aaKnown RBP8.32□□□□□ -1.08
ATXN3-221ENST00000553498 GTPBP4Q9BZE4 634 aaKnown RBP8.32□□□□□ -1.08
ATXN3-221ENST00000553498 MTFR1LQ9H019 292 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 CBX8Q9HC52 389 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 ZNRF3Q9ULT6 936 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 PCDHB6Q9Y5E3 794 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 LAMB1P07942 1786 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 ANKRD31Q8N7Z5 1873 aa8.32□□□□□ -1.08
ATXN3-221ENST00000553498 DDX60LQ5H9U9 1706 aaKnown RBP8.32□□□□□ -1.08
ATXN3-221ENST00000553498 CYTH3O43739 400 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 DGAT1O75907 488 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 SMC2O95347 1197 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 MYL1P05976 194 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 PTMAP06454 111 aaKnown RBP8.31□□□□□ -1.08
ATXN3-221ENST00000553498 KCNA3P22001 575 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 TXLNAP40222 546 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 ZNF543Q08ER8 600 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 IQCB1Q15051 598 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 CERKLQ49MI3 558 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-221ENST00000553498 NT5DC1Q5TFE4 455 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 WWC2Q6AWC2 1192 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 TRAF7Q6Q0C0 670 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 HEATR3Q7Z4Q2 680 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 FAM83AQ86UY5 434 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 NIM1KQ8IY84 436 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 STAG2Q8N3U4 1231 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 LARGE2Q8N3Y3 721 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 MLKLQ8NB16 471 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 GMCL1P1Q8NEA9 526 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 BAP1Q92560 729 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 TSC1Q92574 1164 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 GMCL1Q96IK5 515 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 AK8Q96MA6 479 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 GMLQ99445 158 aa8.31□□□□□ -1.08
ATXN3-221ENST00000553498 TAF1P21675 1872 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 COL11A2P13942 1736 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-221ENST00000553498 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 SIAH2O43255 324 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 SLFN14P0C7P3 912 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 AKR1B1P15121 316 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 DPEP1P16444 411 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 RPS12P25398 132 aaKnown RBP8.3□□□□□ -1.08
ATXN3-221ENST00000553498 HOXA7P31268 230 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-221ENST00000553498 CTHP32929 405 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 NAPAP54920 295 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 NFIAQ12857 509 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 TNIP1Q15025 636 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 NONOQ15233 471 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATXN3-221ENST00000553498 DLGAP5Q15398 846 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 SLC4A8Q2Y0W8 1093 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 CFAP100Q494V2 611 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 DALRD3Q5D0E6 543 aaKnown RBP8.3□□□□□ -1.08
ATXN3-221ENST00000553498 PIK3AP1Q6ZUJ8 805 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 IQUBQ8NA54 791 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 FAM151AQ8WW52 585 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 SHISA4Q96DD7 197 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 MRFAP1L1Q96HT8 127 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 DNAJC25Q9H1X3 360 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 CUEDC2Q9H467 287 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 MAGEF1Q9HAY2 307 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 GINM1Q9NU53 330 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 CLIP2Q9UDT6 1046 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 PCDHA6Q9UN73 950 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 ZKSCAN5Q9Y2L8 839 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 PCDHA8Q9Y5H6 950 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 CD2APQ9Y5K6 639 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 DLEC1Q9Y238 1755 aa8.3□□□□□ -1.08
ATXN3-221ENST00000553498 LTBP3Q9NS15 1303 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 SMCO2A6NFE2 343 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 YDJCA8MPS7 323 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 USP17L5A8MUK1 530 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 MPHOSPH10O00566 681 aaKnown RBP8.29□□□□□ -1.08
ATXN3-221ENST00000553498 ZBTB5O15062 677 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 SLC26A4O43511 780 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 ZNF500O60304 480 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-221ENST00000553498 NEMFO60524 1076 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 MRPL12P52815 198 aaKnown RBP8.29□□□□□ -1.08
ATXN3-221ENST00000553498 POSTNQ15063 836 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 LONRF3Q496Y0 759 aa8.29□□□□□ -1.08
ATXN3-221ENST00000553498 USP17L2Q6R6M4 530 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms