RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 RESP18Q5W5W9 173 aa20.01■□□□□ 0.79
PSEN1-206ENST00000553447 SHC4Q6S5L8 630 aa20.01■□□□□ 0.79
PSEN1-206ENST00000553447 ZNF579Q8NAF0 562 aaKnown RBP20.01■□□□□ 0.79
PSEN1-206ENST00000553447 ENGASEQ8NFI3 743 aa20.01■□□□□ 0.79
PSEN1-206ENST00000553447 WNK4Q96J92 1243 aa20.01■□□□□ 0.79
PSEN1-206ENST00000553447 P2RX7Q99572 595 aaKnown RBP20.01■□□□□ 0.79
PSEN1-206ENST00000553447 DDX19AQ9NUU7 478 aaKnown RBP20.01■□□□□ 0.79
PSEN1-206ENST00000553447 HOXC10Q9NYD6 342 aa20.01■□□□□ 0.79
PSEN1-206ENST00000553447 FAM237AA0A1B0GTK4 181 aa20■□□□□ 0.79
PSEN1-206ENST00000553447 A0A1B0GVL5 298 aa20■□□□□ 0.79
PSEN1-206ENST00000553447 SPDYE3A6NKU9 549 aa20■□□□□ 0.79
PSEN1-206ENST00000553447 SPDYE16A6NNV3 312 aaPredicted RBP20■□□□□ 0.79
PSEN1-206ENST00000553447 GCOM1H8Y6P7 765 aaPredicted RBP20■□□□□ 0.79
PSEN1-206ENST00000553447 LAD1O00515 517 aa20■□□□□ 0.79
PSEN1-206ENST00000553447 EDIL3O43854 480 aa20■□□□□ 0.79
PSEN1-206ENST00000553447 ITGBL1O95965 494 aaPredicted RBP20■□□□□ 0.79
PSEN1-206ENST00000553447 POLR2MP0CAP2 368 aa20■□□□□ 0.79
PSEN1-206ENST00000553447 HOXA7P31268 230 aaPredicted RBP20■□□□□ 0.79
PSEN1-206ENST00000553447 GJA5P36382 358 aa20■□□□□ 0.79
PSEN1-206ENST00000553447 OAZ1P54368 228 aa20■□□□□ 0.79
PSEN1-206ENST00000553447 ARL6IP4Q66PJ3 421 aaKnown RBP20■□□□□ 0.79
PSEN1-206ENST00000553447 C2orf69Q8N8R5 385 aa20■□□□□ 0.79
PSEN1-206ENST00000553447 CFBP00751 764 aa19.99■□□□□ 0.79
PSEN1-206ENST00000553447 ALAS1P13196 640 aa19.99■□□□□ 0.79
PSEN1-206ENST00000553447 PFKFB1P16118 471 aa19.99■□□□□ 0.79
PSEN1-206ENST00000553447 HOXA13P31271 388 aaPredicted RBP19.99■□□□□ 0.79
PSEN1-206ENST00000553447 NDUFA8P51970 172 aa19.99■□□□□ 0.79
PSEN1-206ENST00000553447 SNW1Q13573 536 aaKnown RBP19.99■□□□□ 0.79
PSEN1-206ENST00000553447 MOGSQ13724 837 aa19.99■□□□□ 0.79
PSEN1-206ENST00000553447 FMR1NBQ8N0W7 255 aaPredicted RBP19.99■□□□□ 0.79
PSEN1-206ENST00000553447 CLEC4DQ8WXI8 215 aa19.99■□□□□ 0.79
PSEN1-206ENST00000553447 TBC1D5Q92609 795 aa19.99■□□□□ 0.79
PSEN1-206ENST00000553447 NAP1L4Q99733 375 aaKnown RBP19.99■□□□□ 0.79
PSEN1-206ENST00000553447 TMEM60Q9H2L4 133 aa19.99■□□□□ 0.79
PSEN1-206ENST00000553447 AGTPBP1Q9UPW5 1226 aa19.99■□□□□ 0.79
PSEN1-206ENST00000553447 NEMFO60524 1076 aa19.98■□□□□ 0.79
PSEN1-206ENST00000553447 USP11P51784 963 aa19.98■□□□□ 0.79
PSEN1-206ENST00000553447 GHRHRQ02643 423 aa19.98■□□□□ 0.79
PSEN1-206ENST00000553447 FASTKD5Q7L8L6 764 aaKnown RBP19.98■□□□□ 0.79
PSEN1-206ENST00000553447 MCF2L2Q86YR7 1114 aa19.98■□□□□ 0.79
PSEN1-206ENST00000553447 CRYGNQ8WXF5 182 aa19.98■□□□□ 0.79
PSEN1-206ENST00000553447 CSRNP2Q9H175 543 aa19.98■□□□□ 0.79
PSEN1-206ENST00000553447 NUP62CLQ9H1M0 184 aa19.98■□□□□ 0.79
PSEN1-206ENST00000553447 CLSTN2Q9H4D0 955 aa19.98■□□□□ 0.79
PSEN1-206ENST00000553447 ZNF214Q9UL59 606 aaPredicted RBP19.98■□□□□ 0.79
PSEN1-206ENST00000553447 HPSEQ9Y251 543 aa19.98■□□□□ 0.79
PSEN1-206ENST00000553447 ATP2A1O14983 1001 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 TDP2O95551 362 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 OR52Z1P0C646 297 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 GCFC2P16383 781 aaKnown RBP19.97■□□□□ 0.79
PSEN1-206ENST00000553447 SREBF1P36956 1147 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 PRPHP41219 470 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 HSD17B4P51659 736 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 ZNF445P59923 1031 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 SNAPC2Q13487 334 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 TMEM132BQ14DG7 1078 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 IL17AQ16552 155 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 PPP4R3AQ6IN85 833 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 FCHSD1Q86WN1 690 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 FAM13BQ9NYF5 915 aa19.97■□□□□ 0.79
PSEN1-206ENST00000553447 VWA3AA6NCI4 1184 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 NFIBO00712 420 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 KINO60870 393 aaKnown RBP19.96■□□□□ 0.79
PSEN1-206ENST00000553447 LETM1O95202 739 aaPredicted RBP19.96■□□□□ 0.79
PSEN1-206ENST00000553447 ARHGAP4P98171 946 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 GSE1Q14687 1217 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 MUM1L1Q5H9M0 696 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 SPECC1Q5M775 1068 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 CST9Q5W186 159 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 SNRNP48Q6IEG0 339 aaKnown RBP19.96■□□□□ 0.79
PSEN1-206ENST00000553447 MOXD1Q6UVY6 613 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 SAMD3Q8N6K7 520 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 TRERF1Q96PN7 1200 aa19.96■□□□□ 0.79
PSEN1-206ENST00000553447 SYCE3A1L190 88 aa19.95■□□□□ 0.78
PSEN1-206ENST00000553447 SLC37A4O43826 429 aa19.95■□□□□ 0.78
PSEN1-206ENST00000553447 IRX3P78415 501 aaPredicted RBP19.95■□□□□ 0.78
PSEN1-206ENST00000553447 PABPC4Q13310 644 aaKnown RBP eCLIP19.95■□□□□ 0.78
PSEN1-206ENST00000553447 TKFCQ3LXA3 575 aa19.95■□□□□ 0.78
PSEN1-206ENST00000553447 DTHD1Q6ZMT9 781 aa19.95■□□□□ 0.78
PSEN1-206ENST00000553447 MBOAT7Q96N66 472 aa19.95■□□□□ 0.78
PSEN1-206ENST00000553447 TEX13BQ9BXU2 312 aa19.95■□□□□ 0.78
PSEN1-206ENST00000553447 EHMT1Q9H9B1 1298 aa19.95■□□□□ 0.78
PSEN1-206ENST00000553447 HOMER2Q9NSB8 354 aa19.95■□□□□ 0.78
PSEN1-206ENST00000553447 RNF146Q9NTX7 359 aa19.95■□□□□ 0.78
PSEN1-206ENST00000553447 MAP3K20Q9NYL2 800 aaKnown RBP19.95■□□□□ 0.78
PSEN1-206ENST00000553447 DDX25Q9UHL0 483 aaKnown RBP19.95■□□□□ 0.78
PSEN1-206ENST00000553447 RIPK3Q9Y572 518 aa19.95■□□□□ 0.78
PSEN1-206ENST00000553447 CYP3A7-CYP3A51PA0A087WV96 503 aa19.94■□□□□ 0.78
PSEN1-206ENST00000553447 ZNF202O95125 648 aa19.94■□□□□ 0.78
PSEN1-206ENST00000553447 CYP3A4P08684 503 aa19.94■□□□□ 0.78
PSEN1-206ENST00000553447 CYP3A7P24462 503 aa19.94■□□□□ 0.78
PSEN1-206ENST00000553447 LONP1P36776 959 aaKnown RBP19.94■□□□□ 0.78
PSEN1-206ENST00000553447 SYKP43405 635 aa19.94■□□□□ 0.78
PSEN1-206ENST00000553447 CALCRLQ16602 461 aa19.94■□□□□ 0.78
PSEN1-206ENST00000553447 GPAT2Q6NUI2 795 aa19.94■□□□□ 0.78
PSEN1-206ENST00000553447 LBX2Q6XYB7 198 aa19.94■□□□□ 0.78
PSEN1-206ENST00000553447 MB21D1Q8N884 522 aa19.94■□□□□ 0.78
PSEN1-206ENST00000553447 MTMR9Q96QG7 549 aa19.94■□□□□ 0.78
PSEN1-206ENST00000553447 ASCC2Q9H1I8 757 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms