RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 MPHOSPH6Q99547 160 aaKnown RBP11.7□□□□□ -0.54
ACTN1-208ENST00000553370 COL25A1Q9BXS0 654 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-208ENST00000553370 UPF3AQ9H1J1 476 aaKnown RBP11.7□□□□□ -0.54
ACTN1-208ENST00000553370 BMP2KQ9NSY1 1161 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-208ENST00000553370 PTPDC1A2A3K4 754 aa11.69□□□□□ -0.54
ACTN1-208ENST00000553370 NMT2O60551 498 aa11.69□□□□□ -0.54
ACTN1-208ENST00000553370 CABYRO75952 493 aa11.69□□□□□ -0.54
ACTN1-208ENST00000553370 FSCN1Q16658 493 aaKnown RBP11.69□□□□□ -0.54
ACTN1-208ENST00000553370 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
ACTN1-208ENST00000553370 RCSD1Q6JBY9 416 aa11.69□□□□□ -0.54
ACTN1-208ENST00000553370 FBXO16Q8IX29 292 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-208ENST00000553370 DCAF4Q8WV16 495 aa11.69□□□□□ -0.54
ACTN1-208ENST00000553370 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.69□□□□□ -0.548e-7■■■□□ 15.4
ACTN1-208ENST00000553370 TTYH1Q9H313 450 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-208ENST00000553370 ADD3Q9UEY8 706 aaKnown RBP11.69□□□□□ -0.54
ACTN1-208ENST00000553370 MSRAQ9UJ68 235 aa11.69□□□□□ -0.54
ACTN1-208ENST00000553370 TBX21Q9UL17 535 aa11.69□□□□□ -0.54
ACTN1-208ENST00000553370 TANC1Q9C0D5 1861 aa11.69□□□□□ -0.54
ACTN1-208ENST00000553370 TRIM6-TRIM34B2RNG4 842 aa11.68□□□□□ -0.54
ACTN1-208ENST00000553370 DYNC1LI2O43237 492 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-208ENST00000553370 ADCY6O43306 1168 aa11.68□□□□□ -0.54
ACTN1-208ENST00000553370 CSF2RAP15509 400 aa11.68□□□□□ -0.54
ACTN1-208ENST00000553370 IRX5P78411 483 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-208ENST00000553370 FOXK1P85037 733 aa11.68□□□□□ -0.54
ACTN1-208ENST00000553370 CXCL17Q6UXB2 119 aa11.68□□□□□ -0.54
ACTN1-208ENST00000553370 FAM133AQ8N9E0 248 aa11.68□□□□□ -0.54
ACTN1-208ENST00000553370 PPM1EQ8WY54 764 aa11.68□□□□□ -0.54
ACTN1-208ENST00000553370 EVI5LQ96CN4 794 aa11.68□□□□□ -0.54
ACTN1-208ENST00000553370 HIPK3Q9H422 1215 aa11.68□□□□□ -0.54
ACTN1-208ENST00000553370 PRR12Q9ULL5 1215 aa11.68□□□□□ -0.54
ACTN1-208ENST00000553370 VCANP13611 3396 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 FRMPD2Q68DX3 1309 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-208ENST00000553370 RAD50Q92878 1312 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-208ENST00000553370 TRIM66O15016 1216 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 ACRP10323 421 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 CYP2C18P33260 490 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 ITGA7Q13683 1181 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 RAB30Q15771 203 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 BRDTQ58F21 947 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-208ENST00000553370 SYDE2Q5VT97 1194 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 CCSAPQ6IQ19 270 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-208ENST00000553370 KIAA1211Q6ZU35 1233 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 FAM126BQ8IXS8 530 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 FGD4Q96M96 766 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 KDM4CQ9H3R0 1056 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 ZNF576Q9H609 170 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 VTA1Q9NP79 307 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 GPCPD1Q9NPB8 672 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 CYP39A1Q9NYL5 469 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 TCF20Q9UGU0 1960 aaKnown RBP11.67□□□□□ -0.54
ACTN1-208ENST00000553370 SCN10AQ9Y5Y9 1956 aa11.67□□□□□ -0.54
ACTN1-208ENST00000553370 ZNF536O15090 1300 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 KAT6AQ92794 2004 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 ZBBXA8MT70 800 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 PLA2G6O60733 806 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 ICAM1P05362 532 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 MYL3P08590 195 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 TOP1P11387 765 aaKnown RBP11.66□□□□□ -0.54
ACTN1-208ENST00000553370 CALML3P27482 149 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 SLC16A2P36021 539 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 MFAP1P55081 439 aaKnown RBP11.66□□□□□ -0.54
ACTN1-208ENST00000553370 RRP1P56182 461 aaKnown RBP11.66□□□□□ -0.54
ACTN1-208ENST00000553370 PDE4DQ08499 809 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 MUM1L1Q5H9M0 696 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 FAM47CQ5HY64 1035 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 IQSEC1Q6DN90 963 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 ZNF365Q70YC5 407 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 SYMPKQ92797 1274 aaKnown RBP11.66□□□□□ -0.54
ACTN1-208ENST00000553370 RILPL2Q969X0 211 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 IL23AQ9NPF7 189 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 HELLSQ9NRZ9 838 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 PNMA2Q9UL42 364 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
ACTN1-208ENST00000553370 CHD9Q3L8U1 2897 aa11.66□□□□□ -0.54
ACTN1-208ENST00000553370 B4DLN1 442 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 ORC4O43929 436 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 FGBP02675 491 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 SMPD1P17405 629 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 IGFBP4P22692 258 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 CPT1AP50416 773 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 CDK7P50613 346 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 MRPL12P52815 198 aaKnown RBP11.65□□□□□ -0.54
ACTN1-208ENST00000553370 CCL23P55773 120 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 CHMP4BP1P59074 171 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 HAND2P61296 217 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 GRIN2CQ14957 1233 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 MCMDC2Q4G0Z9 681 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 TMEM240Q5SV17 173 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 VPS53Q5VIR6 699 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 OR6J1Q8NGC5 347 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 SEZ6LQ9BYH1 1024 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 INCENPQ9NQS7 918 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 PDGFCQ9NRA1 345 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 POLR3EQ9NVU0 708 aa11.65□□□□□ -0.54
ACTN1-208ENST00000553370 NOD1Q9Y239 953 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms