RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 MCMDC2Q4G0Z9 681 aa17.74■□□□□ 0.43
APEX1-204ENST00000553368 AKNAD1Q5T1N1 836 aa17.74■□□□□ 0.43
APEX1-204ENST00000553368 CLEC4DQ8WXI8 215 aa17.74■□□□□ 0.43
APEX1-204ENST00000553368 FAM227BQ96M60 508 aa17.74■□□□□ 0.43
APEX1-204ENST00000553368 GAS2L1Q99501 681 aaPredicted RBP17.74■□□□□ 0.43
APEX1-204ENST00000553368 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
APEX1-204ENST00000553368 PRDM12Q9H4Q4 367 aa17.74■□□□□ 0.43
APEX1-204ENST00000553368 MSRAQ9UJ68 235 aa17.74■□□□□ 0.43
APEX1-204ENST00000553368 A0A0D9SFI3 127 aa17.73■□□□□ 0.43
APEX1-204ENST00000553368 HSPD1P10809 573 aaKnown RBP17.73■□□□□ 0.43
APEX1-204ENST00000553368 PDHBP11177 359 aa17.73■□□□□ 0.43
APEX1-204ENST00000553368 ADGRE1Q14246 886 aa17.73■□□□□ 0.43
APEX1-204ENST00000553368 TJAP1Q5JTD0 557 aa17.73■□□□□ 0.43
APEX1-204ENST00000553368 TTC14Q96N46 770 aa17.73■□□□□ 0.43
APEX1-204ENST00000553368 WDR11Q9BZH6 1224 aa17.73■□□□□ 0.43
APEX1-204ENST00000553368 ALDH8A1Q9H2A2 487 aaPredicted RBP17.73■□□□□ 0.43
APEX1-204ENST00000553368 GPCPD1Q9NPB8 672 aa17.73■□□□□ 0.43
APEX1-204ENST00000553368 POLR3EQ9NVU0 708 aa17.73■□□□□ 0.43
APEX1-204ENST00000553368 MYO9BQ13459 2157 aa17.73■□□□□ 0.43
APEX1-204ENST00000553368 FRMPD2Q68DX3 1309 aaPredicted RBP17.72■□□□□ 0.43
APEX1-204ENST00000553368 SNHG28P0DPA3 235 aa17.72■□□□□ 0.43
APEX1-204ENST00000553368 RRP1P56182 461 aaKnown RBP17.72■□□□□ 0.43
APEX1-204ENST00000553368 PURAQ00577 322 aaKnown RBP17.72■□□□□ 0.43
APEX1-204ENST00000553368 HDAC1Q13547 482 aaPredicted RBP17.72■□□□□ 0.43
APEX1-204ENST00000553368 SLC30A10Q6XR72 485 aa17.72■□□□□ 0.43
APEX1-204ENST00000553368 OTOP2Q7RTS6 562 aa17.72■□□□□ 0.43
APEX1-204ENST00000553368 RPUSD2Q8IZ73 545 aaKnown RBP17.72■□□□□ 0.43
APEX1-204ENST00000553368 NKX2-4Q9H2Z4 354 aa17.72■□□□□ 0.43
APEX1-204ENST00000553368 PRDM6Q9NQX0 595 aa17.72■□□□□ 0.43
APEX1-204ENST00000553368 TOMM22Q9NS69 142 aa17.72■□□□□ 0.43
APEX1-204ENST00000553368 ZBTB47Q9UFB7 747 aaPredicted RBP17.72■□□□□ 0.43
APEX1-204ENST00000553368 PNMA2Q9UL42 364 aa17.72■□□□□ 0.43
APEX1-204ENST00000553368 YBX2Q9Y2T7 364 aaKnown RBP17.72■□□□□ 0.43
APEX1-204ENST00000553368 CHD9Q3L8U1 2897 aa17.72■□□□□ 0.43
APEX1-204ENST00000553368 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
APEX1-204ENST00000553368 GBF1Q92538 1859 aa17.71■□□□□ 0.43
APEX1-204ENST00000553368 PCP11498 1178 aaKnown RBP17.71■□□□□ 0.43
APEX1-204ENST00000553368 EDNRBP24530 442 aa17.71■□□□□ 0.43
APEX1-204ENST00000553368 ZNF543Q08ER8 600 aa17.71■□□□□ 0.43
APEX1-204ENST00000553368 RRP12Q5JTH9 1297 aaKnown RBP17.71■□□□□ 0.43
APEX1-204ENST00000553368 ZNF589Q86UQ0 364 aaPredicted RBP17.71■□□□□ 0.43
APEX1-204ENST00000553368 SCN10AQ9Y5Y9 1956 aa17.7■□□□□ 0.42
APEX1-204ENST00000553368 TTC28Q96AY4 2481 aa17.7■□□□□ 0.42
APEX1-204ENST00000553368 PTPDC1A2A3K4 754 aa17.7■□□□□ 0.42
APEX1-204ENST00000553368 SUPT20HL2P0C7V6 817 aa17.7■□□□□ 0.42
APEX1-204ENST00000553368 CPT1AP50416 773 aa17.7■□□□□ 0.42
APEX1-204ENST00000553368 NMIQ13287 307 aaPredicted RBP17.7■□□□□ 0.42
APEX1-204ENST00000553368 RNF207Q6ZRF8 634 aa17.7■□□□□ 0.42
APEX1-204ENST00000553368 DNERQ8NFT8 737 aa17.7■□□□□ 0.42
APEX1-204ENST00000553368 OR6J1Q8NGC5 347 aa17.7■□□□□ 0.42
APEX1-204ENST00000553368 ATXN2LQ8WWM7 1075 aaKnown RBP17.7■□□□□ 0.42
APEX1-204ENST00000553368 SCLYQ96I15 445 aa17.7■□□□□ 0.42
APEX1-204ENST00000553368 TNKSO95271 1327 aa17.7■□□□□ 0.42
APEX1-204ENST00000553368 NKRFO15226 690 aaKnown RBP eCLIP17.69■□□□□ 0.42
APEX1-204ENST00000553368 PFKMP08237 780 aa17.69■□□□□ 0.42
APEX1-204ENST00000553368 CALML3P27482 149 aa17.69■□□□□ 0.42
APEX1-204ENST00000553368 RPS6P62753 249 aaKnown RBP17.69■□□□□ 0.42
APEX1-204ENST00000553368 RGS22Q8NE09 1264 aa17.69■□□□□ 0.42
APEX1-204ENST00000553368 CRBNQ96SW2 442 aa17.69■□□□□ 0.42
APEX1-204ENST00000553368 MTG1Q9BT17 334 aaPredicted RBP17.69■□□□□ 0.42
APEX1-204ENST00000553368 SLC28A3Q9HAS3 691 aa17.69■□□□□ 0.42
APEX1-204ENST00000553368 TRMT13Q9NUP7 481 aaKnown RBP17.69■□□□□ 0.42
APEX1-204ENST00000553368 SLC4A7Q9Y6M7 1214 aa17.69■□□□□ 0.42
APEX1-204ENST00000553368 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
APEX1-204ENST00000553368 MUC3AQ02505 3323 aa17.69■□□□□ 0.42
APEX1-204ENST00000553368 A6NJR5 290 aa17.68■□□□□ 0.42
APEX1-204ENST00000553368 MYL3P08590 195 aa17.68■□□□□ 0.42
APEX1-204ENST00000553368 CYP2C9P11712 490 aa17.68■□□□□ 0.42
APEX1-204ENST00000553368 HAND2P61296 217 aa17.68■□□□□ 0.42
APEX1-204ENST00000553368 PPM1EQ8WY54 764 aa17.68■□□□□ 0.42
APEX1-204ENST00000553368 MAF1Q9H063 256 aa17.68■□□□□ 0.42
APEX1-204ENST00000553368 PCDHA11Q9Y5I1 949 aa17.68■□□□□ 0.42
APEX1-204ENST00000553368 KPNA6O60684 536 aa17.67■□□□□ 0.42
APEX1-204ENST00000553368 RABGGTBP53611 331 aa17.67■□□□□ 0.42
APEX1-204ENST00000553368 PDE4DQ08499 809 aa17.67■□□□□ 0.42
APEX1-204ENST00000553368 PPP2R5BQ15173 497 aa17.67■□□□□ 0.42
APEX1-204ENST00000553368 NBPF20Q3BBV1 942 aa17.67■□□□□ 0.42
APEX1-204ENST00000553368 GPATCH4Q5T3I0 446 aaKnown RBP17.67■□□□□ 0.42
APEX1-204ENST00000553368 MFSD6Q6ZSS7 791 aa17.67■□□□□ 0.42
APEX1-204ENST00000553368 TBC1D10CQ8IV04 446 aa17.67■□□□□ 0.42
APEX1-204ENST00000553368 SCFD2Q8WU76 684 aa17.67■□□□□ 0.42
APEX1-204ENST00000553368 MPHOSPH6Q99547 160 aaKnown RBP17.67■□□□□ 0.42
APEX1-204ENST00000553368 GPHNQ9NQX3 736 aaPredicted RBP17.67■□□□□ 0.42
APEX1-204ENST00000553368 THEGQ9P2T0 379 aa17.67■□□□□ 0.42
APEX1-204ENST00000553368 CHD7Q9P2D1 2997 aa17.67■□□□□ 0.42
APEX1-204ENST00000553368 NT5C2P49902 561 aa17.66■□□□□ 0.42
APEX1-204ENST00000553368 PTPN11Q06124 597 aaPredicted RBP17.66■□□□□ 0.42
APEX1-204ENST00000553368 TTLL4Q14679 1199 aa17.66■□□□□ 0.42
APEX1-204ENST00000553368 BRDTQ58F21 947 aaPredicted RBP17.66■□□□□ 0.42
APEX1-204ENST00000553368 NFRKBQ6P4R8 1299 aa17.66■□□□□ 0.42
APEX1-204ENST00000553368 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
APEX1-204ENST00000553368 COPS5Q92905 334 aa17.66■□□□□ 0.42
APEX1-204ENST00000553368 ASB2Q96Q27 587 aa17.66■□□□□ 0.42
APEX1-204ENST00000553368 RNF41Q9H4P4 317 aaPredicted RBP17.66■□□□□ 0.42
APEX1-204ENST00000553368 RAD50Q92878 1312 aa17.66■□□□□ 0.42
APEX1-204ENST00000553368 SCN5AQ14524 2016 aa17.65■□□□□ 0.42
APEX1-204ENST00000553368 ZBBXA8MT70 800 aa17.65■□□□□ 0.42
APEX1-204ENST00000553368 B4DLN1 442 aa17.65■□□□□ 0.42
APEX1-204ENST00000553368 TNFRSF10AO00220 468 aa17.65■□□□□ 0.42
APEX1-204ENST00000553368 MYOGP15173 224 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms