RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 DENND5AQ6IQ26 1287 aa6.91□□□□□ -1.3
SCFD1-209ENST00000553280 STYK1Q6J9G0 422 aa6.91□□□□□ -1.3
SCFD1-209ENST00000553280 KREMEN2Q8NCW0 462 aa6.91□□□□□ -1.3
SCFD1-209ENST00000553280 PI4K2BQ8TCG2 481 aa6.91□□□□□ -1.3
SCFD1-209ENST00000553280 DCAF4Q8WV16 495 aa6.91□□□□□ -1.3
SCFD1-209ENST00000553280 JDP2Q8WYK2 163 aa6.91□□□□□ -1.3
SCFD1-209ENST00000553280 DSCC1Q9BVC3 393 aa6.91□□□□□ -1.3
SCFD1-209ENST00000553280 RC3H2Q9HBD1 1191 aaKnown RBP6.91□□□□□ -1.3
SCFD1-209ENST00000553280 PRDM5Q9NQX1 630 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-209ENST00000553280 WASHC2CQ9Y4E1 1318 aa6.91□□□□□ -1.3
SCFD1-209ENST00000553280 IGF2BP3O00425 579 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCFD1-209ENST00000553280 PRAMEF1O95521 474 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 GSNP06396 782 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 ITGB5P18084 799 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 IGFALSP35858 605 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 FLT3P36888 993 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 NMIQ13287 307 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-209ENST00000553280 NKPD1Q17RQ9 610 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 PRSS53Q2L4Q9 553 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 C22orf34Q6ZV56 151 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 KRTAP19-1Q8IUB9 90 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 SPACA3Q8IXA5 215 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 COPS5Q92905 334 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 ASCC2Q9H1I8 757 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-209ENST00000553280 PRDM7Q9NQW5 492 aa6.9□□□□□ -1.3
SCFD1-209ENST00000553280 MBNL3Q9NUK0 354 aaKnown RBP6.9□□□□□ -1.3
SCFD1-209ENST00000553280 THRAP3Q9Y2W1 955 aaKnown RBP6.9□□□□□ -1.3
SCFD1-209ENST00000553280 PRR33A8MZF0 331 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 B4E1Z4 1266 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 H0Y8X5 98 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 AQP7O14520 342 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 PAPLNO95428 1278 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 CBX7O95931 251 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 ZNF460Q14592 562 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 DPY19L1Q2PZI1 675 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 ANGEL2Q5VTE6 544 aaKnown RBP6.89□□□□□ -1.31
SCFD1-209ENST00000553280 CWF19L1Q69YN2 538 aaKnown RBP6.89□□□□□ -1.31
SCFD1-209ENST00000553280 PKN3Q6P5Z2 889 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 USP53Q70EK8 1073 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 DAGLBQ8NCG7 672 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 PIWIL2Q8TC59 973 aaKnown RBP6.89□□□□□ -1.31
SCFD1-209ENST00000553280 ASIC4Q96FT7 647 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 MINPP1Q9UNW1 487 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 TRAF6Q9Y4K3 522 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 SNX11Q9Y5W9 270 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 ST14Q9Y5Y6 855 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 PHLDB1Q86UU1 1377 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 ASXL2Q76L83 1435 aa6.89□□□□□ -1.31
SCFD1-209ENST00000553280 RASGRP1O95267 797 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 CRTAMO95727 393 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 JMJD7P0C870 316 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 JUNBP17275 347 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-209ENST00000553280 NAT1P18440 290 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 CTSKP43235 329 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 NOP2P46087 812 aaKnown RBP6.88□□□□□ -1.31
SCFD1-209ENST00000553280 GUCY2FP51841 1108 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 SCRN1Q12765 414 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 STRN3Q13033 797 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 IKZF1Q13422 519 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 FAM50AQ14320 339 aaKnown RBP6.88□□□□□ -1.31
SCFD1-209ENST00000553280 TESK1Q15569 626 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 CFAP100Q494V2 611 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 HSP90AB2PQ58FF8 381 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 ACBD5Q5T8D3 534 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-209ENST00000553280 CDCA2Q69YH5 1023 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-209ENST00000553280 RSPO2Q6UXX9 243 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-209ENST00000553280 UBE2R2Q712K3 238 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-209ENST00000553280 ANKLE2Q86XL3 938 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 ZNF655Q8N720 491 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-209ENST00000553280 FRS2Q8WU20 508 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 ASB11Q8WXH4 323 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 ZFYVE21Q9BQ24 234 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 ORAI3Q9BRQ5 295 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 MCMBPQ9BTE3 642 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 FAN1Q9Y2M0 1017 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 NPFFR2Q9Y5X5 522 aa6.88□□□□□ -1.31
SCFD1-209ENST00000553280 FAM155AB1AL88 458 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-209ENST00000553280 AURKAO14965 403 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 BRINP1O60477 761 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 APPP05067 770 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 THBDP07204 575 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 ZNF865P0CJ78 1059 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-209ENST00000553280 KCNA6P17658 529 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 CDKAL1Q5VV42 579 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 RNF219Q5W0B1 726 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-209ENST00000553280 OGFOD2Q6N063 350 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 KCNT2Q6UVM3 1135 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 NECAB2Q7Z6G3 386 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 KIF18BQ86Y91 864 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 FMNL3Q8IVF7 1028 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 NPLOC4Q8TAT6 608 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 WDR66Q8TBY9 1149 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 HDAC8Q9BY41 377 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 PCDHA9Q9Y5H5 950 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 EID1Q9Y6B2 187 aa6.87□□□□□ -1.31
SCFD1-209ENST00000553280 SHISA3A0PJX4 238 aa6.86□□□□□ -1.31
SCFD1-209ENST00000553280 C2orf71A6NGG8 1288 aa6.86□□□□□ -1.31
SCFD1-209ENST00000553280 ARNTLO00327 626 aa6.86□□□□□ -1.31
SCFD1-209ENST00000553280 MEIS1O00470 390 aa6.86□□□□□ -1.31
SCFD1-209ENST00000553280 BIN1O00499 593 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms