RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	HMX1	Q9NP08	348 aa	Predicted RBP	11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	RBM28	Q9NW13	759 aa	Known RBP	11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SLC5A4	Q9NY91	659 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	OGDHL	Q9ULD0	1010 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CYP46A1	Q9Y6A2	500 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	DDX49	Q9Y6V7	483 aa	Known RBP	11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PLXNA1	Q9UIW2	1896 aa		11.74	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	GOLGA8A	A7E2F4	631 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	POTEB2	H3BUK9	544 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ADCY6	O43306	1168 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SGPL1	O95470	568 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	MYC	P01106	439 aa	Predicted RBP	11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SLC4A3	P48751	1232 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	FRMPD4	Q14CM0	1322 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PPP2R5B	Q15173	497 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PRAMEF19	Q5SWL8	479 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	TYW1B	Q6NUM6	668 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	NSMF	Q6X4W1	530 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	RNF207	Q6ZRF8	634 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ARMCX2	Q7L311	632 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	DEFB118	Q96PH6	123 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	BIN2	Q9UBW5	565 aa	Predicted RBP	11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PCDHA1	Q9Y5I3	950 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	BRCA2	P51587	3418 aa		11.73	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	FRMPD3	Q5JV73	1810 aa		11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SEPT4	O43236	478 aa		11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	DHX16	O60231	1041 aa	Known RBP	11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	CAPN2	P17655	700 aa		11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ADD1	P35611	737 aa	Known RBP	11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ALDH5A1	P51649	535 aa	Predicted RBP	11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	NKX3-2	P78367	333 aa		11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PKN1	Q16512	942 aa		11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	HOMER1	Q86YM7	354 aa		11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	SAMD3	Q8N6K7	520 aa		11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	RRP36	Q96EU6	259 aa	Known RBP	11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ZNF274	Q96GC6	653 aa	Predicted RBP	11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PDRG1	Q9NUG6	133 aa		11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	DDX20	Q9UHI6	824 aa	Known RBP	11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	TPCN1	Q9ULQ1	816 aa		11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	MRPL11	Q9Y3B7	192 aa	Known RBP	11.72	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	COL6A3	P12111	3177 aa		11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	PIK3CD	O00329	1044 aa		11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	METAP2	P50579	478 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	AK2	P54819	239 aa		11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ST3GAL1	Q11201	340 aa		11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	WWC2	Q6AWC2	1192 aa		11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	TAPT1	Q6NXT6	567 aa		11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	DNER	Q8NFT8	737 aa		11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	TMEM106C	Q9BVX2	250 aa		11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	NCOA5	Q9HCD5	579 aa	Known RBP	11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	MAP3K20	Q9NYL2	800 aa	Known RBP	11.71	□□□□□ -0.53
CALCOCO1-222	ENST00000553154	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	hCG_1642624	A0A1W2PR95	340 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	RBM47	A0AV96	593 aa	Known RBP	11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	PTPDC1	A2A3K4	754 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	ASB14	A6NK59	587 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	STXBP3	O00186	592 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	MEIS2	O14770	477 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	CTAGE5	O15320	804 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	MSC	O60682	206 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	LARGE1	O95461	756 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	COL6A1	P12109	1028 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	IFNAR1	P17181	557 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	CALML3	P27482	149 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	FXR1	P51114	621 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	TRAF1	Q13077	416 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	SYNE3	Q6ZMZ3	975 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	MCF2L2	Q86YR7	1114 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	ANKLE1	Q8NAG6	615 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	TAAR1	Q96RJ0	339 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	LARP6	Q9BRS8	491 aa	Known RBP	11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	ABHD16B	Q9H3Z7	469 aa		11.7	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	CCDC196	A0A1B0GTZ2	297 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	PRPF3	O43395	683 aa	Known RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	PFKFB2	O60825	505 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	ADAMTS4	O75173	837 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	ACVR2B	Q13705	512 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	PFKFB3	Q16875	520 aa	Predicted RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	PPP1R18	Q6NYC8	613 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	TEX2	Q8IWB9	1127 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	CCDC82	Q8N4S0	544 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	IL31RA	Q8NI17	732 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	DIS3L	Q8TF46	1054 aa	Known RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	PIBF1	Q8WXW3	757 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	LENG1	Q96BZ8	264 aa	Predicted RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	TBC1D32	Q96NH3	1257 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	RNF26	Q9BY78	433 aa	Predicted RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	BACH2	Q9BYV9	841 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	C22orf23	Q9BZE7	217 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	UPF3A	Q9H1J1	476 aa	Known RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	VTA1	Q9NP79	307 aa		11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	ADD3	Q9UEY8	706 aa	Known RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	GNE	Q9Y223	722 aa	Known RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154		V9GY48	417 aa	Predicted RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	RANBP2	P49792	3224 aa	Known RBP	11.69	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	ESYT2	A0FGR8	921 aa		11.68	□□□□□ -0.54
CALCOCO1-222	ENST00000553154	hCG_1984214	I3L0E3	225 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms