RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 MED15Q96RN5 788 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 AMNQ9BXJ7 453 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 DDX25Q9UHL0 483 aaKnown RBP10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 GJA3Q9Y6H8 435 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 PSDA5PKW4 1024 aaPredicted RBP10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 EGFRP00533 1210 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 RASSF7Q02833 373 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 CCDC84Q86UT8 332 aaPredicted RBP10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 FBXO11Q86XK2 927 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 CREBRFQ8IUR6 639 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 CALML4Q96GE6 196 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 LRWD1Q9UFC0 647 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 GDAQ9Y2T3 454 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 ATAD5Q96QE3 1844 aa10.24□□□□□ -0.77
RAB3IP-218ENST00000553099 SKILP12757 684 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 STAT2P52630 851 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 GSDMDP57764 484 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 ORC2Q13416 577 aaPredicted RBP10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 FAM83BQ5T0W9 1011 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 CCDC125Q86Z20 511 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 LRRC15Q8TF66 581 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 CDK5RAP3Q96JB5 506 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 ANO3Q9BYT9 981 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 RAB34Q9BZG1 259 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 GOPCQ9HD26 462 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 RMND1Q9NWS8 449 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 EDIL3O43854 480 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 SFPQP23246 707 aaKnown RBP eCLIP10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 TNIP1Q15025 636 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 KIAA1755Q5JYT7 1200 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 FAM83AQ86UY5 434 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 IGSF22Q8N9C0 903 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 MTMR9Q96QG7 549 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 IMPACTQ9P2X3 320 aa10.23□□□□□ -0.77
RAB3IP-218ENST00000553099 PPP1R3GB7ZBB8 358 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 RASA3Q14644 834 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 ZNF658Q5TYW1 1059 aaPredicted RBP10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 MTMR14Q8NCE2 650 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 SNX29Q8TEQ0 813 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 KIFC2Q96AC6 838 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 GLT8D2Q9H1C3 349 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 PRR12Q9ULL5 1215 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 ZNF18P17022 549 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 HOXA13P31271 388 aaPredicted RBP10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 ASIC1P78348 528 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 KMT5BQ4FZB7 885 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 FKBP1CQ5VVH2 108 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 SPATA1Q5VX52 437 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 PPP4R3AQ6IN85 833 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 CCDC174Q6PII3 467 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 SAMD7Q7Z3H4 446 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 FEZ1Q99689 392 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 MMTAG2Q9BU76 263 aaKnown RBP10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 GLIS2Q9BZE0 524 aaPredicted RBP10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 SPTLC3Q9NUV7 552 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 KBTBD4Q9NVX7 518 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 TMX2Q9Y320 296 aa10.22□□□□□ -0.77
RAB3IP-218ENST00000553099 SPDYE3A6NKU9 549 aa10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 MEIS2O14770 477 aa10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 CAP2P40123 477 aa10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 FXR2P51116 673 aaKnown RBP eCLIP10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 CCZ1BP86790 482 aa10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 CCZ1P86791 482 aaPredicted RBP10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 PAK1Q13153 545 aa10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 TBC1D10BQ4KMP7 808 aaPredicted RBP10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 ARMCX5Q6P1M9 558 aa10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 MICALL2Q8IY33 904 aa10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 CCDC150Q8NCX0 1101 aa10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 NELFBQ8WX92 580 aa10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 C16orf45Q96MC5 204 aaPredicted RBP10.21□□□□□ -0.77
RAB3IP-218ENST00000553099 PRCPP42785 496 aa10.21□□□□□ -0.78
RAB3IP-218ENST00000553099 GOLGA8FQ08AF8 430 aa10.21□□□□□ -0.78
RAB3IP-218ENST00000553099 GOLGA8DPQ0D2H9 430 aa10.21□□□□□ -0.78
RAB3IP-218ENST00000553099 KRT79Q5XKE5 535 aa10.21□□□□□ -0.78
RAB3IP-218ENST00000553099 FCHSD1Q86WN1 690 aa10.21□□□□□ -0.78
RAB3IP-218ENST00000553099 CUEDC2Q9H467 287 aa10.21□□□□□ -0.78
RAB3IP-218ENST00000553099 INTS13Q9NVM9 706 aa10.21□□□□□ -0.78
RAB3IP-218ENST00000553099 PCDHA12Q9UN75 941 aa10.21□□□□□ -0.78
RAB3IP-218ENST00000553099 ASTN2O75129 1339 aaPredicted RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 NRDCO43847 1150 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 ASNSP08243 561 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 GCFC2P16383 781 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 GMPSP49915 693 aaPredicted RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 GRB10Q13322 594 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 TNFAIP1Q13829 316 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 CT47A1Q5JQC4 288 aaPredicted RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 VSTM4Q8IW00 320 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 HAS1Q92839 578 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 ZBED3Q96IU2 234 aaPredicted RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 NUDT12Q9BQG2 462 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 TRIM9Q9C026 710 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 VCPKMTQ9H867 229 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 TRIM49BA6NDI0 452 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 CFBP00751 764 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 CCT6AP40227 531 aaKnown RBP10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 ARHGAP4P98171 946 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 PDE4DQ08499 809 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 AP3B2Q13367 1082 aa10.2□□□□□ -0.78
RAB3IP-218ENST00000553099 MCM6Q14566 821 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms