RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 RABGAP1Q9Y3P9 1069 aa12.44□□□□□ -0.42
LINC00661-206ENST00000552608 ZNF536O15090 1300 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 MEIS2O14770 477 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 ATP2A1O14983 1001 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 NEMFO60524 1076 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 ALAS1P13196 640 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 PRPHP41219 470 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 PTGDRQ13258 359 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 NOM1Q5C9Z4 860 aaKnown RBP12.43□□□□□ -0.42
LINC00661-206ENST00000552608 PPP4R3AQ6IN85 833 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 USP17L6PQ6QN14 398 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 MOXD1Q6UVY6 613 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 AGBL1Q96MI9 1066 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 PYM1Q9BRP8 204 aaKnown RBP12.43□□□□□ -0.42
LINC00661-206ENST00000552608 GZF1Q9H116 711 aaPredicted RBP12.43□□□□□ -0.42
LINC00661-206ENST00000552608 NUP62CLQ9H1M0 184 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 GPBP1L1Q9HC44 474 aaPredicted RBP12.43□□□□□ -0.42
LINC00661-206ENST00000552608 FBXO2Q9UK22 296 aaPredicted RBP12.43□□□□□ -0.42
LINC00661-206ENST00000552608 PNMA3Q9UL41 463 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 ADAMTS5Q9UNA0 930 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 AGTPBP1Q9UPW5 1226 aa12.43□□□□□ -0.42
LINC00661-206ENST00000552608 ADAMTS3O15072 1205 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 CTAGE5O15320 804 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 MARCH6O60337 910 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 CETPP11597 493 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 LIG1P18858 919 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 LONP1P36776 959 aaKnown RBP12.42□□□□□ -0.42
LINC00661-206ENST00000552608 TXLNAP40222 546 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 GTF2A2P52657 109 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 TMEM266Q2M3C6 531 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 AXDND1Q5T1B0 1012 aaPredicted RBP12.42□□□□□ -0.42
LINC00661-206ENST00000552608 RESP18Q5W5W9 173 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 SNRNP48Q6IEG0 339 aaKnown RBP12.42□□□□□ -0.42
LINC00661-206ENST00000552608 DTHD1Q6ZMT9 781 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 GTF3C2Q8WUA4 911 aaPredicted RBP12.42□□□□□ -0.42
LINC00661-206ENST00000552608 CNKSR2Q8WXI2 1034 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 WNK4Q96J92 1243 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 TRERF1Q96PN7 1200 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 TEX13BQ9BXU2 312 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 RAB34Q9BZG1 259 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 DACT1Q9NYF0 836 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 TMEM63CQ9P1W3 806 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 SMCHD1A6NHR9 2005 aa12.42□□□□□ -0.42
LINC00661-206ENST00000552608 FAM237AA0A1B0GTK4 181 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 SPDYE16A6NNV3 312 aaPredicted RBP12.41□□□□□ -0.42
LINC00661-206ENST00000552608 OR52Z1P0C646 297 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 ZBTB48P10074 688 aaPredicted RBP12.41□□□□□ -0.42
LINC00661-206ENST00000552608 COPB2P35606 906 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 ZNF76P36508 570 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 GHRHRQ02643 423 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 GSE1Q14687 1217 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 ZSCAN23Q3MJ62 389 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 TREML2Q5T2D2 321 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 TNMDQ9H2S6 317 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 CLSTN2Q9H4D0 955 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 RNF146Q9NTX7 359 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 FBXO40Q9UH90 709 aa12.41□□□□□ -0.42
LINC00661-206ENST00000552608 HOOK1Q9UJC3 728 aaKnown RBP12.41□□□□□ -0.42
LINC00661-206ENST00000552608 A0A1B0GVL5 298 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 VWA3AA6NCI4 1184 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 OPLAHO14841 1288 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 PFKFB1P16118 471 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 HOXA13P31271 388 aaPredicted RBP12.4□□□□□ -0.42
LINC00661-206ENST00000552608 SREBF1P36956 1147 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 STAT3P40763 770 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 SYKP43405 635 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 HSD17B4P51659 736 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 ARHGAP4P98171 946 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 PLS1Q14651 629 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 CALCRLQ16602 461 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 SHC4Q6S5L8 630 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 LBX2Q6XYB7 198 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 CHST13Q8NET6 341 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 REPS2Q8NFH8 660 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 AK8Q96MA6 479 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 TIGD1Q96MW7 591 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 CLIC6Q96NY7 704 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 ACAD9Q9H845 621 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 DDX25Q9UHL0 483 aaKnown RBP12.4□□□□□ -0.42
LINC00661-206ENST00000552608 SLC45A1Q9Y2W3 748 aa12.4□□□□□ -0.42
LINC00661-206ENST00000552608 CYP3A7-CYP3A51PA0A087WV96 503 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 NR1I2O75469 434 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 ITGBL1O95965 494 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-206ENST00000552608 CYP3A4P08684 503 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 CYP3A7P24462 503 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 NDUFA8P51970 172 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 HUNKP57058 714 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 ZNF445P59923 1031 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 FMR1Q06787 632 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC00661-206ENST00000552608 TMEM132BQ14DG7 1078 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 KANK3Q6NY19 840 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 RNF207Q6ZRF8 634 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 SLFN12Q8IYM2 578 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 FMR1NBQ8N0W7 255 aaPredicted RBP12.39□□□□□ -0.43
LINC00661-206ENST00000552608 C4orf32Q8N8J7 132 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 ENGASEQ8NFI3 743 aa12.39□□□□□ -0.43
LINC00661-206ENST00000552608 ASCC2Q9H1I8 757 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms