RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 LENG1Q96BZ8 264 aaPredicted RBP5.4□□□□□ -1.54
LSM6P2-201ENST00000552208 SMAD5Q99717 465 aaKnown RBP5.4□□□□□ -1.54
LSM6P2-201ENST00000552208 PHF20Q9BVI0 1012 aa5.4□□□□□ -1.54
LSM6P2-201ENST00000552208 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
LSM6P2-201ENST00000552208 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
LSM6P2-201ENST00000552208 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.4□□□□□ -1.54
LSM6P2-201ENST00000552208 GPRC5CQ9NQ84 441 aa5.4□□□□□ -1.54
LSM6P2-201ENST00000552208 RNF112Q9ULX5 631 aa5.4□□□□□ -1.54
LSM6P2-201ENST00000552208 SHISA3A0PJX4 238 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 GNB5O14775 395 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 PRPF3O43395 683 aaKnown RBP5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 MSCO60682 206 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 ARHGEF15O94989 841 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 FKBP9O95302 570 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 SRFP11831 508 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 YBX3P16989 372 aaKnown RBP eCLIP5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 ERVK-21P61565 698 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 NMIQ13287 307 aaPredicted RBP5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 SGO2Q562F6 1265 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 GORABQ5T7V8 394 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 LBX2Q6XYB7 198 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 C22orf34Q6ZV56 151 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 FKBP9P1Q75LS8 142 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 IFNL3Q8IZI9 196 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 IGSF22Q8N9C0 903 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 ENOX1Q8TC92 643 aaKnown RBP5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 FCRL3Q96P31 734 aaPredicted RBP5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 KRTAP4-12Q9BQ66 201 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 DSCC1Q9BVC3 393 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 DUSP23Q9BVJ7 150 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 HDAC8Q9BY41 377 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 CEP41Q9BYV8 373 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 RHOBTB2Q9BYZ6 727 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 CELF4Q9BZC1 486 aaKnown RBP5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 AKTIPQ9H8T0 292 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 RRAGCQ9HB90 399 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 LGR6Q9HBX8 967 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 TCF7L1Q9HCS4 588 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 AASDHPPTQ9NRN7 309 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 MKL2Q9ULH7 1088 aa5.39□□□□□ -1.55
LSM6P2-201ENST00000552208 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 C2orf71A6NGG8 1288 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 BTBD11A6QL63 1104 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 FZD9O00144 591 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 STXBP3O00186 592 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 LEFTY1O75610 366 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 PYGMP11217 842 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 LTBRP36941 435 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 KIR3DL1P43629 444 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 LSSP48449 732 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 CDK5R2Q13319 367 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 GRIK4Q16099 956 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 E4F1Q66K89 784 aaPredicted RBP5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 CREB3L3Q68CJ9 461 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 ZBTB46Q86UZ6 589 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 TOP6BLQ8N6T0 577 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 MAGEB6Q8N7X4 407 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 DAGLBQ8NCG7 672 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 RPS6KC1Q96S38 1066 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 YIPF2Q9BWQ6 316 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 SLC12A9Q9BXP2 914 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 SLC13A1Q9BZW2 595 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 VTA1Q9NP79 307 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 EMC7Q9NPA0 242 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 NOP53Q9NZM5 478 aaKnown RBP5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 B4GALT6Q9UBX8 382 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 BACE2Q9Y5Z0 518 aa5.38□□□□□ -1.55
LSM6P2-201ENST00000552208 WDR64B1ANS9 1081 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 EIF3JO75822 258 aaKnown RBP5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 ZNF865P0CJ78 1059 aaPredicted RBP5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 LCP1P13796 627 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 IFNGR1P15260 489 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 ATP2A2P16615 1042 aaKnown RBP5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 ZSCAN20P17040 1043 aaPredicted RBP5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 ATF3P18847 181 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 NOS3P29474 1203 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 BMP8BP34820 402 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 BIRC2Q13490 618 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 TMEM177Q53S58 311 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 RCSD1Q6JBY9 416 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 CRTC3Q6UUV7 619 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 OVCH1Q7RTY7 1134 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 PODNQ7Z5L7 613 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 MTDHQ86UE4 582 aaKnown RBP5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 ALYREFQ86V81 257 aaKnown RBP5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 ARMC10Q8N2F6 343 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 HEXIM2Q96MH2 286 aaKnown RBP5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 ZNF180Q9UJW8 692 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 KCNH3Q9ULD8 1083 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 TPX2Q9ULW0 747 aaKnown RBP5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 ADAMTS8Q9UP79 889 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 COQ6Q9Y2Z9 468 aa5.37□□□□□ -1.55
LSM6P2-201ENST00000552208 MEFVO15553 781 aaPredicted RBP5.36□□□□□ -1.55
LSM6P2-201ENST00000552208 SART1O43290 800 aaKnown RBP5.36□□□□□ -1.55
LSM6P2-201ENST00000552208 GAS2O43903 313 aaKnown RBP5.36□□□□□ -1.55
LSM6P2-201ENST00000552208 KRT18P05783 430 aaKnown RBP5.36□□□□□ -1.55
LSM6P2-201ENST00000552208 CD3EP07766 207 aa5.36□□□□□ -1.55
LSM6P2-201ENST00000552208 PLS3P13797 630 aa5.36□□□□□ -1.55
LSM6P2-201ENST00000552208 VAV1P15498 845 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms