RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 HERC5Q9UII4 1024 aaKnown RBP15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 HDAC9Q9UKV0 1011 aa15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 PAXBP1Q9Y5B6 917 aa15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 TEX33O43247 280 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 FILIP1LQ4L180 1135 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 DEFB132Q7Z7B7 95 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 SLC16A10Q8TF71 515 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 TRIM9Q9C026 710 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 VPS33BQ9H267 617 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 ZNF70Q9UC06 446 aaPredicted RBP15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 PCDHA1Q9Y5I3 950 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 COL4A5P29400 1685 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 LRRC10BA6NIK2 292 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 TCP10L2B9ZVM9 353 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 NDUFB10O96000 172 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 GCFC2P16383 781 aaKnown RBP15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 PBX1P40424 430 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 AMPD3Q01432 767 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 SPAG1Q07617 926 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 GRB10Q13322 594 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 DLGAP5Q15398 846 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 TMEM139Q8IV31 216 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 GIMAP8Q8ND71 665 aaPredicted RBP15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 FAM151AQ8WW52 585 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 RAB34Q9BZG1 259 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 DDX25Q9UHL0 483 aaKnown RBP15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 MAPK8IP1Q9UQF2 711 aa15.76■□□□□ 0.11
RAB3IP-216ENST00000552199 H7C1D1 291 aa15.75■□□□□ 0.11
RAB3IP-216ENST00000552199 STIM1Q13586 685 aa15.75■□□□□ 0.11
RAB3IP-216ENST00000552199 TC2NQ8N9U0 490 aa15.75■□□□□ 0.11
RAB3IP-216ENST00000552199 CCDC47Q96A33 483 aaKnown RBP15.75■□□□□ 0.11
RAB3IP-216ENST00000552199 PPP1R13BQ96KQ4 1090 aa15.75■□□□□ 0.11
RAB3IP-216ENST00000552199 NAP1L4Q99733 375 aaKnown RBP15.75■□□□□ 0.11
RAB3IP-216ENST00000552199 SYNPO2Q9UMS6 1093 aa15.75■□□□□ 0.11
RAB3IP-216ENST00000552199 CLRN2A0PK11 232 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 USP17L15C9J2P7 530 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 USP17L13C9JLJ4 530 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 USP17L11C9JVI0 530 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 USP17L18D6R9N7 530 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 USP17L22D6RA61 530 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 USP17L17D6RBQ6 530 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 USP17L19D6RCP7 530 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 USP17L20D6RJB6 530 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 USP17L24Q0WX57 530 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 KRT31Q15323 416 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 USP17L6PQ6QN14 398 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 OGFOD1Q8N543 542 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 PNMA5Q96PV4 448 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 NUP88Q99567 741 aaPredicted RBP15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 GTPBP4Q9BZE4 634 aaKnown RBP15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 STK17AQ9UEE5 414 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 KIF13BQ9NQT8 1826 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 KIF2AO00139 706 aaPredicted RBP15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 CCP110O43303 1012 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 BMP3P12645 472 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 ADKP55263 362 aaKnown RBP15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 SPDYE2Q495Y8 402 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 TCP11X2Q5H9J9 407 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 SYDE2Q5VT97 1194 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 BTNL9Q6UXG8 535 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 SV2BQ7L1I2 683 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 FCHSD1Q86WN1 690 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 HAS1Q92839 578 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 AMNQ9BXJ7 453 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 BLOC1S4Q9NUP1 217 aa15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 ZBTB12Q9Y330 459 aaPredicted RBP15.74■□□□□ 0.11
RAB3IP-216ENST00000552199 A0A1W2PRG0 241 aa15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 KCNJ18B7U540 433 aa15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 ARHGAP6O43182 974 aa15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 USP11P51784 963 aa15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 ASIC1P78348 528 aa15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 KCNJ12Q14500 433 aa15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 FBXO11Q86XK2 927 aa15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 DHTKD1Q96HY7 919 aaPredicted RBP15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 BAG1Q99933 345 aaPredicted RBP15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 EXOC1Q9NV70 894 aa15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 ZNRF3Q9ULT6 936 aa15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 CNTNAP1P78357 1384 aa15.73■□□□□ 0.11
RAB3IP-216ENST00000552199 POTEMA6NI47 508 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 AKR1B15C9JRZ8 316 aaPredicted RBP15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 MEIS2O14770 477 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 PSMA7O14818 248 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 STX10O60499 249 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 COPB1P53618 953 aaKnown RBP15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 SNAP25P60880 206 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 PDE4DQ08499 809 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 IKQ13123 557 aaPredicted RBP15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 KRT79Q5XKE5 535 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 MCTP2Q6DN12 878 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 ANKRD20A12PQ8NF67 263 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 ZNF592Q92610 1267 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 CDK5RAP3Q96JB5 506 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 ANO3Q9BYT9 981 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 CYP3A7-CYP3A51PA0A087WV96 503 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 TRIM49BA6NDI0 452 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 CYP3A7P24462 503 aa15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 CCT6AP40227 531 aaKnown RBP15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 PMS1P54277 932 aaKnown RBP15.72■□□□□ 0.11
RAB3IP-216ENST00000552199 AP3B2Q13367 1082 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms