RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 OPLAHO14841 1288 aa21.53■■□□□ 1.04
DDX54-209ENST00000551912 CDKL5O76039 1030 aa21.53■■□□□ 1.04
DDX54-209ENST00000551912 LARGE1O95461 756 aa21.53■■□□□ 1.04
DDX54-209ENST00000551912 CFBP00751 764 aa21.53■■□□□ 1.04
DDX54-209ENST00000551912 TRIM22Q8IYM9 498 aa21.53■■□□□ 1.04
DDX54-209ENST00000551912 MSL3Q8N5Y2 521 aaKnown RBP21.53■■□□□ 1.04
DDX54-209ENST00000551912 SAMD3Q8N6K7 520 aa21.53■■□□□ 1.04
DDX54-209ENST00000551912 TBC1D5Q92609 795 aa21.53■■□□□ 1.04
DDX54-209ENST00000551912 SOWAHBA6NEL2 793 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 hCG_1984214I3L0E3 225 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 PPFIA3O75145 1194 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 IGHA2P01877 340 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 PRKAR2AP13861 404 aaKnown RBP21.52■■□□□ 1.04
DDX54-209ENST00000551912 CYP2C19P33261 490 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 GHRHRQ02643 423 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 SSRP1Q08945 709 aaKnown RBP21.52■■□□□ 1.04
DDX54-209ENST00000551912 TRIM32Q13049 653 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 PFKFB3Q16875 520 aaPredicted RBP21.52■■□□□ 1.04
DDX54-209ENST00000551912 WWC2Q6AWC2 1192 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 ZNF713Q8N859 430 aaPredicted RBP21.52■■□□□ 1.04
DDX54-209ENST00000551912 NECAB1Q8N987 351 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 GPKOWQ92917 476 aaPredicted RBP eCLIP21.52■■□□□ 1.04
DDX54-209ENST00000551912 GTF3C6Q969F1 213 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 FGD4Q96M96 766 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 TINF2Q9BSI4 451 aa21.52■■□□□ 1.04
DDX54-209ENST00000551912 MAP3K20Q9NYL2 800 aaKnown RBP21.52■■□□□ 1.04
DDX54-209ENST00000551912 ADD3Q9UEY8 706 aaKnown RBP21.52■■□□□ 1.04
DDX54-209ENST00000551912 RBBP6Q7Z6E9 1792 aaKnown RBP21.51■■□□□ 1.03
DDX54-209ENST00000551912 GCOM1H8Y6P7 765 aaPredicted RBP21.51■■□□□ 1.03
DDX54-209ENST00000551912 MYCP01106 439 aaPredicted RBP21.51■■□□□ 1.03
DDX54-209ENST00000551912 POLR2MP0CAP2 368 aa21.51■■□□□ 1.03
DDX54-209ENST00000551912 SCG2P13521 617 aa21.51■■□□□ 1.03
DDX54-209ENST00000551912 HSD17B4P51659 736 aa21.51■■□□□ 1.03
DDX54-209ENST00000551912 MAP3K21Q5TCX8 1036 aa21.51■■□□□ 1.03
DDX54-209ENST00000551912 MAMDC4Q6UXC1 1216 aa21.51■■□□□ 1.03
DDX54-209ENST00000551912 ZSCAN31Q96LW9 406 aaPredicted RBP21.51■■□□□ 1.03
DDX54-209ENST00000551912 PURBQ96QR8 312 aaKnown RBP21.51■■□□□ 1.03
DDX54-209ENST00000551912 ASB14A6NK59 587 aa21.5■■□□□ 1.03
DDX54-209ENST00000551912 STXBP3O00186 592 aa21.5■■□□□ 1.03
DDX54-209ENST00000551912 NAPAP54920 295 aa21.5■■□□□ 1.03
DDX54-209ENST00000551912 CACNB2Q08289 660 aaPredicted RBP21.5■■□□□ 1.03
DDX54-209ENST00000551912 PKN1Q16512 942 aa21.5■■□□□ 1.03
DDX54-209ENST00000551912 PPP1R18Q6NYC8 613 aa21.5■■□□□ 1.03
DDX54-209ENST00000551912 DNERQ8NFT8 737 aa21.5■■□□□ 1.03
DDX54-209ENST00000551912 SYTL5Q8TDW5 730 aaPredicted RBP21.5■■□□□ 1.03
DDX54-209ENST00000551912 SH2B1Q9NRF2 756 aaPredicted RBP21.5■■□□□ 1.03
DDX54-209ENST00000551912 BARHL2Q9NY43 387 aa21.5■■□□□ 1.03
DDX54-209ENST00000551912 SYNGAP1Q96PV0 1343 aa21.5■■□□□ 1.03
DDX54-209ENST00000551912 HOXA13P31271 388 aaPredicted RBP21.49■■□□□ 1.03
DDX54-209ENST00000551912 MTFR1Q15390 333 aa21.49■■□□□ 1.03
DDX54-209ENST00000551912 CUL5Q93034 780 aa21.49■■□□□ 1.03
DDX54-209ENST00000551912 PSTPIP2Q9H939 334 aa21.49■■□□□ 1.03
DDX54-209ENST00000551912 HMX1Q9NP08 348 aaPredicted RBP21.49■■□□□ 1.03
DDX54-209ENST00000551912 COL20A1Q9P218 1284 aa21.49■■□□□ 1.03
DDX54-209ENST00000551912 ASTN1O14525 1302 aa21.49■■□□□ 1.03
DDX54-209ENST00000551912 RPTORQ8N122 1335 aa21.49■■□□□ 1.03
DDX54-209ENST00000551912 LCTP09848 1927 aa21.49■■□□□ 1.03
DDX54-209ENST00000551912 LOC102724159A0A0B4J2E5 919 aa21.48■■□□□ 1.03
DDX54-209ENST00000551912 DEXIO95424 95 aa21.48■■□□□ 1.03
DDX54-209ENST00000551912 CCL5P13501 91 aa21.48■■□□□ 1.03
DDX54-209ENST00000551912 MCM2P49736 904 aa21.48■■□□□ 1.03
DDX54-209ENST00000551912 ALDH5A1P51649 535 aaPredicted RBP21.48■■□□□ 1.03
DDX54-209ENST00000551912 PWP2Q15269 919 aaKnown RBP21.48■■□□□ 1.03
DDX54-209ENST00000551912 ARMCX2Q7L311 632 aa21.48■■□□□ 1.03
DDX54-209ENST00000551912 MPHOSPH6Q99547 160 aaKnown RBP21.48■■□□□ 1.03
DDX54-209ENST00000551912 UNC93B1Q9H1C4 597 aa21.48■■□□□ 1.03
DDX54-209ENST00000551912 NRBP1Q9UHY1 535 aa21.48■■□□□ 1.03
DDX54-209ENST00000551912 CNPY2Q9Y2B0 182 aa21.48■■□□□ 1.03
DDX54-209ENST00000551912 B4DLN1 442 aa21.47■■□□□ 1.03
DDX54-209ENST00000551912 PIK3CDO00329 1044 aa21.47■■□□□ 1.03
DDX54-209ENST00000551912 CTDNEP1O95476 244 aa21.47■■□□□ 1.03
DDX54-209ENST00000551912 CYBAP13498 195 aa21.47■■□□□ 1.03
DDX54-209ENST00000551912 MRPL12P52815 198 aaKnown RBP21.47■■□□□ 1.03
DDX54-209ENST00000551912 TYW1BQ6NUM6 668 aa21.47■■□□□ 1.03
DDX54-209ENST00000551912 SMARCC2Q8TAQ2 1214 aa21.47■■□□□ 1.03
DDX54-209ENST00000551912 NSUN6Q8TEA1 469 aaKnown RBP21.47■■□□□ 1.03
DDX54-209ENST00000551912 CCDC12Q8WUD4 166 aaPredicted RBP21.47■■□□□ 1.03
DDX54-209ENST00000551912 TAAR1Q96RJ0 339 aa21.47■■□□□ 1.03
DDX54-209ENST00000551912 RMDN3Q96TC7 470 aa21.47■■□□□ 1.03
DDX54-209ENST00000551912 RNF208Q9H0X6 261 aa21.47■■□□□ 1.03
DDX54-209ENST00000551912 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.47■■□□□ 1.03
DDX54-209ENST00000551912 STK36Q9NRP7 1315 aa21.47■■□□□ 1.03
DDX54-209ENST00000551912 CCDC85CA6NKD9 419 aa21.46■■□□□ 1.03
DDX54-209ENST00000551912 MEIS2O14770 477 aa21.46■■□□□ 1.03
DDX54-209ENST00000551912 CD2BP2O95400 341 aaKnown RBP21.46■■□□□ 1.03
DDX54-209ENST00000551912 SNAI1O95863 264 aaPredicted RBP21.46■■□□□ 1.03
DDX54-209ENST00000551912 PRAMEF19Q5SWL8 479 aa21.46■■□□□ 1.03
DDX54-209ENST00000551912 FCHSD1Q86WN1 690 aa21.46■■□□□ 1.03
DDX54-209ENST00000551912 CCDC83Q8IWF9 413 aa21.46■■□□□ 1.03
DDX54-209ENST00000551912 TMEM106CQ9BVX2 250 aa21.46■■□□□ 1.03
DDX54-209ENST00000551912 SMCO2A6NFE2 343 aa21.45■■□□□ 1.02
DDX54-209ENST00000551912 CCND3P30281 292 aaPredicted RBP21.45■■□□□ 1.02
DDX54-209ENST00000551912 ADCY7P51828 1080 aa21.45■■□□□ 1.02
DDX54-209ENST00000551912 ST3GAL1Q11201 340 aa21.45■■□□□ 1.02
DDX54-209ENST00000551912 ARHGEF16Q5VV41 709 aa21.45■■□□□ 1.02
DDX54-209ENST00000551912 USP17L6PQ6QN14 398 aa21.45■■□□□ 1.02
DDX54-209ENST00000551912 TEX2Q8IWB9 1127 aa21.45■■□□□ 1.02
DDX54-209ENST00000551912 NSUN7Q8NE18 718 aaKnown RBP21.45■■□□□ 1.02
DDX54-209ENST00000551912 TRPV1Q8NER1 839 aa21.45■■□□□ 1.02
DDX54-209ENST00000551912 MORC4Q8TE76 937 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms