RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 UNC93B1Q9H1C4 597 aa17.52■□□□□ 0.4
SMARCD1-211ENST00000551497 COL20A1Q9P218 1284 aa17.52■□□□□ 0.4
SMARCD1-211ENST00000551497 PLXNA1Q9UIW2 1896 aa17.52■□□□□ 0.39
SMARCD1-211ENST00000551497 ZNF236Q9UL36 1845 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 PRPF3O43395 683 aaKnown RBP17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 CFBP00751 764 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 IFNAR1P17181 557 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 HOXA13P31271 388 aaPredicted RBP17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 MLLT1Q03111 559 aaPredicted RBP17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 TRAF1Q13077 416 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 PKN1Q16512 942 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 MFSD14CQ5VZR4 134 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 HEATR3Q7Z4Q2 680 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 MCF2L2Q86YR7 1114 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 TRPV1Q8NER1 839 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 SYTL5Q8TDW5 730 aaPredicted RBP17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 TINF2Q9BSI4 451 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 SLC26A6Q9BXS9 759 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 LIMCH1Q9UPQ0 1083 aa17.51■□□□□ 0.39
SMARCD1-211ENST00000551497 SNAI1O95863 264 aaPredicted RBP17.5■□□□□ 0.39
SMARCD1-211ENST00000551497 CCL5P13501 91 aa17.5■□□□□ 0.39
SMARCD1-211ENST00000551497 PRKAR2AP13861 404 aaKnown RBP17.5■□□□□ 0.39
SMARCD1-211ENST00000551497 UBXN2AP68543 259 aa17.5■□□□□ 0.39
SMARCD1-211ENST00000551497 MAP3K21Q5TCX8 1036 aa17.5■□□□□ 0.39
SMARCD1-211ENST00000551497 WWC2Q6AWC2 1192 aa17.5■□□□□ 0.39
SMARCD1-211ENST00000551497 TYW1BQ6NUM6 668 aa17.5■□□□□ 0.39
SMARCD1-211ENST00000551497 TAAR1Q96RJ0 339 aa17.5■□□□□ 0.39
SMARCD1-211ENST00000551497 HTTP42858 3142 aa17.49■□□□□ 0.39
SMARCD1-211ENST00000551497 CPLX1O14810 134 aa17.49■□□□□ 0.39
SMARCD1-211ENST00000551497 CD2BP2O95400 341 aaKnown RBP17.49■□□□□ 0.39
SMARCD1-211ENST00000551497 CTDNEP1O95476 244 aa17.49■□□□□ 0.39
SMARCD1-211ENST00000551497 CCND3P30281 292 aaPredicted RBP17.49■□□□□ 0.39
SMARCD1-211ENST00000551497 HSD17B4P51659 736 aa17.49■□□□□ 0.39
SMARCD1-211ENST00000551497 PFKFB3Q16875 520 aaPredicted RBP17.49■□□□□ 0.39
SMARCD1-211ENST00000551497 MAMDC4Q6UXC1 1216 aa17.49■□□□□ 0.39
SMARCD1-211ENST00000551497 ZNF467Q7Z7K2 595 aaPredicted RBP17.49■□□□□ 0.39
SMARCD1-211ENST00000551497 RNF208Q9H0X6 261 aa17.49■□□□□ 0.39
SMARCD1-211ENST00000551497 GCOM1H8Y6P7 765 aaPredicted RBP17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 STXBP3O00186 592 aa17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 POLR2MP0CAP2 368 aa17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 SCG2P13521 617 aa17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 AKAP17AQ02040 695 aaKnown RBP17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 ST3GAL1Q11201 340 aa17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 USP17L6PQ6QN14 398 aa17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 RNF26Q9BY78 433 aaPredicted RBP17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 LCTP09848 1927 aa17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 MCM3APO60318 1980 aa17.48■□□□□ 0.39
SMARCD1-211ENST00000551497 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 RGS19P49795 217 aa17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 ALDH5A1P51649 535 aaPredicted RBP17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 GHRHRQ02643 423 aa17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 ARMCX2Q7L311 632 aa17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 FCHSD1Q86WN1 690 aa17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 GTF3C6Q969F1 213 aa17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 AIFM3Q96NN9 605 aa17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 MAF1Q9H063 256 aa17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 PSTPIP2Q9H939 334 aa17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 HMX1Q9NP08 348 aaPredicted RBP17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 BARHL2Q9NY43 387 aa17.47■□□□□ 0.39
SMARCD1-211ENST00000551497 POTEFA5A3E0 1075 aa17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 MEIS2O14770 477 aa17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 ADAMTS3O15072 1205 aa17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 CYBAP13498 195 aa17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 CNGA1P29973 690 aa17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 NAPAP54920 295 aa17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 CPLX2Q6PUV4 134 aaKnown RBP17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 EEPD1Q7L9B9 569 aa17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 MSL3Q8N5Y2 521 aaKnown RBP17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 SHISA4Q96DD7 197 aa17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 ADD3Q9UEY8 706 aaKnown RBP17.46■□□□□ 0.39
SMARCD1-211ENST00000551497 SYNGAP1Q96PV0 1343 aa17.46■□□□□ 0.38
SMARCD1-211ENST00000551497 SMCO2A6NFE2 343 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 ASB14A6NK59 587 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 ST18O60284 1047 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 ZNF865P0CJ78 1059 aaPredicted RBP17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 SOX10P56693 466 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 UBE2SQ16763 222 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 TRIM22Q8IYM9 498 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 SAMD3Q8N6K7 520 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 DNERQ8NFT8 737 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 ZSCAN31Q96LW9 406 aaPredicted RBP17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 DEFB118Q96PH6 123 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 RMDN3Q96TC7 470 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 TMEM106CQ9BVX2 250 aa17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 PAK6Q9NQU5 681 aaPredicted RBP17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 MAP3K20Q9NYL2 800 aaKnown RBP17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 RBM27Q9P2N5 1060 aaKnown RBP17.45■□□□□ 0.38
SMARCD1-211ENST00000551497 KIAA0100Q14667 2235 aaKnown RBP17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 JAK2O60674 1132 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 EIF2AK2P19525 551 aaKnown RBP17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 ACVR2BQ13705 512 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 ARHGEF16Q5VV41 709 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 ANO1Q5XXA6 986 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 CCDC83Q8IWF9 413 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 SMARCC2Q8TAQ2 1214 aa17.44■□□□□ 0.38
SMARCD1-211ENST00000551497 MORC4Q8TE76 937 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms