RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.7■■□□□ 1.38
SLC48A1-208ENST00000551301 SMPD1P17405 629 aa23.7■■□□□ 1.38
SLC48A1-208ENST00000551301 RPS6P62753 249 aaKnown RBP23.7■■□□□ 1.38
SLC48A1-208ENST00000551301 CDC37Q16543 378 aaPredicted RBP23.7■■□□□ 1.38
SLC48A1-208ENST00000551301 MCF2L2Q86YR7 1114 aa23.7■■□□□ 1.38
SLC48A1-208ENST00000551301 ADGRF4Q8IZF3 695 aa23.7■■□□□ 1.38
SLC48A1-208ENST00000551301 DEFB123Q8N688 67 aa23.7■■□□□ 1.38
SLC48A1-208ENST00000551301 GNEQ9Y223 722 aaKnown RBP23.7■■□□□ 1.38
SLC48A1-208ENST00000551301 LAMA3Q16787 3333 aa23.7■■□□□ 1.38
SLC48A1-208ENST00000551301 LTBP2Q14767 1821 aa23.7■■□□□ 1.38
SLC48A1-208ENST00000551301 ARVCFO00192 962 aa23.69■■□□□ 1.38
SLC48A1-208ENST00000551301 BEX3Q00994 111 aa23.69■■□□□ 1.38
SLC48A1-208ENST00000551301 BRDTQ58F21 947 aaPredicted RBP23.69■■□□□ 1.38
SLC48A1-208ENST00000551301 TAPT1Q6NXT6 567 aa23.69■■□□□ 1.38
SLC48A1-208ENST00000551301 SLC30A10Q6XR72 485 aa23.69■■□□□ 1.38
SLC48A1-208ENST00000551301 PURBQ96QR8 312 aaKnown RBP23.69■■□□□ 1.38
SLC48A1-208ENST00000551301 PDGFCQ9NRA1 345 aa23.69■■□□□ 1.38
SLC48A1-208ENST00000551301 FPGSQ05932 587 aa23.68■■□□□ 1.38
SLC48A1-208ENST00000551301 FAAP100Q0VG06 881 aa23.68■■□□□ 1.38
SLC48A1-208ENST00000551301 DUSP28Q4G0W2 176 aa23.68■■□□□ 1.38
SLC48A1-208ENST00000551301 WDR11Q9BZH6 1224 aa23.68■■□□□ 1.38
SLC48A1-208ENST00000551301 IL25Q9H293 177 aa23.68■■□□□ 1.38
SLC48A1-208ENST00000551301 CPVLQ9H3G5 476 aa23.68■■□□□ 1.38
SLC48A1-208ENST00000551301 VAT1LQ9HCJ6 419 aa23.68■■□□□ 1.38
SLC48A1-208ENST00000551301 MRPL11Q9Y3B7 192 aaKnown RBP23.68■■□□□ 1.38
SLC48A1-208ENST00000551301 IRX5P78411 483 aaPredicted RBP23.67■■□□□ 1.38
SLC48A1-208ENST00000551301 TRAF1Q13077 416 aa23.67■■□□□ 1.38
SLC48A1-208ENST00000551301 SHHQ15465 462 aa23.67■■□□□ 1.38
SLC48A1-208ENST00000551301 CXCL17Q6UXB2 119 aa23.67■■□□□ 1.38
SLC48A1-208ENST00000551301 FBXO11Q86XK2 927 aa23.67■■□□□ 1.38
SLC48A1-208ENST00000551301 NCOA7Q8NI08 942 aa23.67■■□□□ 1.38
SLC48A1-208ENST00000551301 DDX49Q9Y6V7 483 aaKnown RBP23.67■■□□□ 1.38
SLC48A1-208ENST00000551301 IFIT3O14879 490 aaKnown RBP23.66■■□□□ 1.38
SLC48A1-208ENST00000551301 CTAGE5O15320 804 aa23.66■■□□□ 1.38
SLC48A1-208ENST00000551301 SGSM2O43147 1006 aa23.66■■□□□ 1.38
SLC48A1-208ENST00000551301 CPT1AP50416 773 aa23.66■■□□□ 1.38
SLC48A1-208ENST00000551301 CDK7P50613 346 aa23.66■■□□□ 1.38
SLC48A1-208ENST00000551301 SCFD2Q8WU76 684 aa23.66■■□□□ 1.38
SLC48A1-208ENST00000551301 GPHNQ9NQX3 736 aaPredicted RBP23.66■■□□□ 1.38
SLC48A1-208ENST00000551301 KLRF2D3W0D1 207 aa23.65■■□□□ 1.38
SLC48A1-208ENST00000551301 NKRFO15226 690 aaKnown RBP eCLIP23.65■■□□□ 1.38
SLC48A1-208ENST00000551301 TIMP1P01033 207 aa23.65■■□□□ 1.38
SLC48A1-208ENST00000551301 CYP21A2P08686 494 aa23.65■■□□□ 1.38
SLC48A1-208ENST00000551301 PTH1RQ03431 593 aa23.65■■□□□ 1.38
SLC48A1-208ENST00000551301 PPP2R5BQ15173 497 aa23.65■■□□□ 1.38
SLC48A1-208ENST00000551301 QRICH1Q2TAL8 776 aa23.65■■□□□ 1.38
SLC48A1-208ENST00000551301 POLR3EQ9NVU0 708 aa23.65■■□□□ 1.38
SLC48A1-208ENST00000551301 SEC23AQ15436 765 aa23.64■■□□□ 1.37
SLC48A1-208ENST00000551301 CYB5R4Q7L1T6 521 aa23.64■■□□□ 1.37
SLC48A1-208ENST00000551301 NSUN6Q8TEA1 469 aaKnown RBP23.64■■□□□ 1.37
SLC48A1-208ENST00000551301 AMNQ9BXJ7 453 aa23.64■■□□□ 1.37
SLC48A1-208ENST00000551301 JMJD4Q9H9V9 463 aa23.64■■□□□ 1.37
SLC48A1-208ENST00000551301 TBX21Q9UL17 535 aa23.64■■□□□ 1.37
SLC48A1-208ENST00000551301 LRRC37A2A6NM11 1700 aa23.64■■□□□ 1.37
SLC48A1-208ENST00000551301 LCTP09848 1927 aa23.63■■□□□ 1.37
SLC48A1-208ENST00000551301 RBM47A0AV96 593 aaKnown RBP23.63■■□□□ 1.37
SLC48A1-208ENST00000551301 E7EWF7 191 aa23.63■■□□□ 1.37
SLC48A1-208ENST00000551301 ITGA7Q13683 1181 aa23.63■■□□□ 1.37
SLC48A1-208ENST00000551301 WTAPQ15007 396 aa23.63■■□□□ 1.37
SLC48A1-208ENST00000551301 C9orf50Q5SZB4 431 aa23.63■■□□□ 1.37
SLC48A1-208ENST00000551301 TMEM199Q8N511 208 aa23.63■■□□□ 1.37
SLC48A1-208ENST00000551301 OR6J1Q8NGC5 347 aa23.63■■□□□ 1.37
SLC48A1-208ENST00000551301 RNPC3Q96LT9 517 aaKnown RBP23.63■■□□□ 1.37
SLC48A1-208ENST00000551301 MYH6P13533 1939 aa23.63■■□□□ 1.37
SLC48A1-208ENST00000551301 EDNRBP24530 442 aa23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 ITGB8P26012 769 aa23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 PPIGQ13427 754 aaKnown RBP eCLIP23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 TTLL4Q14679 1199 aa23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 FAM109BQ6ICB4 259 aaPredicted RBP23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 MFSD5Q6N075 450 aa23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 Q7L0L9 218 aa23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 CATIPQ7Z7H3 387 aa23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 FAM126BQ8IXS8 530 aa23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 MAP4K1Q92918 833 aa23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 IWS1Q96ST2 819 aa23.62■■□□□ 1.37
SLC48A1-208ENST00000551301 KPNA6O60684 536 aa23.61■■□□□ 1.37
SLC48A1-208ENST00000551301 TXNP10599 105 aaKnown RBP23.61■■□□□ 1.37
SLC48A1-208ENST00000551301 TMEM67Q5HYA8 995 aa23.61■■□□□ 1.37
SLC48A1-208ENST00000551301 ZNF697Q5TEC3 545 aa23.61■■□□□ 1.37
SLC48A1-208ENST00000551301 RMDN3Q96TC7 470 aa23.61■■□□□ 1.37
SLC48A1-208ENST00000551301 STXBP2Q15833 593 aa23.6■■□□□ 1.37
SLC48A1-208ENST00000551301 ARHGEF16Q5VV41 709 aa23.6■■□□□ 1.37
SLC48A1-208ENST00000551301 STAG2Q8N3U4 1231 aa23.6■■□□□ 1.37
SLC48A1-208ENST00000551301 SLC43A3Q8NBI5 491 aa23.6■■□□□ 1.37
SLC48A1-208ENST00000551301 SYTL5Q8TDW5 730 aaPredicted RBP23.6■■□□□ 1.37
SLC48A1-208ENST00000551301 MTMR10Q9NXD2 777 aa23.6■■□□□ 1.37
SLC48A1-208ENST00000551301 MAD2L2Q9UI95 211 aa23.6■■□□□ 1.37
SLC48A1-208ENST00000551301 RBM8AQ9Y5S9 174 aaKnown RBP23.6■■□□□ 1.37
SLC48A1-208ENST00000551301 PALM3A6NDB9 673 aaPredicted RBP23.59■■□□□ 1.37
SLC48A1-208ENST00000551301 ZBTB5O15062 677 aa23.59■■□□□ 1.37
SLC48A1-208ENST00000551301 CFBP00751 764 aa23.59■■□□□ 1.37
SLC48A1-208ENST00000551301 MYL3P08590 195 aa23.59■■□□□ 1.37
SLC48A1-208ENST00000551301 SMAD3P84022 425 aaKnown RBP23.59■■□□□ 1.37
SLC48A1-208ENST00000551301 CASC1Q6TDU7 716 aa23.59■■□□□ 1.37
SLC48A1-208ENST00000551301 MAP3K20Q9NYL2 800 aaKnown RBP23.59■■□□□ 1.37
SLC48A1-208ENST00000551301 PCDHA1Q9Y5I3 950 aa23.59■■□□□ 1.37
SLC48A1-208ENST00000551301 CD4P01730 458 aa23.58■■□□□ 1.37
SLC48A1-208ENST00000551301 SUPT20HL2P0C7V6 817 aa23.58■■□□□ 1.37
SLC48A1-208ENST00000551301 GRM4Q14833 912 aa23.58■■□□□ 1.37
SLC48A1-208ENST00000551301 TMEM63BQ5T3F8 832 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms