RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 RFXAPO00287 272 aa7.52□□□□□ -1.21
GPN3-209ENST00000551079 DBHP09172 617 aa7.52□□□□□ -1.21
GPN3-209ENST00000551079 ZC3H14Q6PJT7 736 aaKnown RBP7.52□□□□□ -1.21
GPN3-209ENST00000551079 GMLQ99445 158 aa7.52□□□□□ -1.21
GPN3-209ENST00000551079 R3HCC1Q9Y3T6 440 aaKnown RBP7.52□□□□□ -1.21
GPN3-209ENST00000551079 KCTD3Q9Y597 815 aa7.52□□□□□ -1.21
GPN3-209ENST00000551079 IRAK3Q9Y616 596 aa7.52□□□□□ -1.21
GPN3-209ENST00000551079 SCRN1Q12765 414 aa7.51□□□□□ -1.21
GPN3-209ENST00000551079 PLEKHN1Q494U1 663 aaPredicted RBP7.51□□□□□ -1.21
GPN3-209ENST00000551079 SV2CQ496J9 727 aa7.51□□□□□ -1.21
GPN3-209ENST00000551079 CABP7Q86V35 215 aa7.51□□□□□ -1.21
GPN3-209ENST00000551079 AMIGO3Q86WK7 504 aa7.51□□□□□ -1.21
GPN3-209ENST00000551079 CPNE8Q86YQ8 564 aa7.51□□□□□ -1.21
GPN3-209ENST00000551079 MZB1Q8WU39 189 aa7.51□□□□□ -1.21
GPN3-209ENST00000551079 COPS5Q92905 334 aa7.51□□□□□ -1.21
GPN3-209ENST00000551079 MRGPRX3Q96LB0 322 aa7.51□□□□□ -1.21
GPN3-209ENST00000551079 CYP26B1Q9NR63 512 aa7.51□□□□□ -1.21
GPN3-209ENST00000551079 SUSD5O60279 629 aa7.5□□□□□ -1.21
GPN3-209ENST00000551079 TACR1P25103 407 aa7.5□□□□□ -1.21
GPN3-209ENST00000551079 CDR1P51861 262 aa7.5□□□□□ -1.21
GPN3-209ENST00000551079 EPHB3P54753 998 aa7.5□□□□□ -1.21
GPN3-209ENST00000551079 GTF2IRD2BQ6EKJ0 949 aa7.5□□□□□ -1.21
GPN3-209ENST00000551079 GTF2IRD2Q86UP8 949 aa7.5□□□□□ -1.21
GPN3-209ENST00000551079 LDHDQ86WU2 507 aa7.5□□□□□ -1.21
GPN3-209ENST00000551079 IRF2BPLQ9H1B7 796 aa7.5□□□□□ -1.21
GPN3-209ENST00000551079 NKX2-4Q9H2Z4 354 aa7.5□□□□□ -1.21
GPN3-209ENST00000551079 LRP2BPQ9P2M1 347 aa7.5□□□□□ -1.21
GPN3-209ENST00000551079 B2RBV5 119 aa7.49□□□□□ -1.21
GPN3-209ENST00000551079 NPHS1O60500 1241 aa7.49□□□□□ -1.21
GPN3-209ENST00000551079 FBLN7Q53RD9 439 aa7.49□□□□□ -1.21
GPN3-209ENST00000551079 LCNL1Q6ZST4 164 aa7.49□□□□□ -1.21
GPN3-209ENST00000551079 EEPD1Q7L9B9 569 aa7.49□□□□□ -1.21
GPN3-209ENST00000551079 TMEM151BQ8IW70 566 aa7.49□□□□□ -1.21
GPN3-209ENST00000551079 LZTR1Q8N653 840 aa7.49□□□□□ -1.21
GPN3-209ENST00000551079 MMP19Q99542 508 aa7.49□□□□□ -1.21
GPN3-209ENST00000551079 DBR1Q9UK59 544 aaKnown RBP7.49□□□□□ -1.21
GPN3-209ENST00000551079 F8W031 263 aaPredicted RBP7.48□□□□□ -1.21
GPN3-209ENST00000551079 IRS4O14654 1257 aaPredicted RBP7.48□□□□□ -1.21
GPN3-209ENST00000551079 GLI4P10075 376 aa7.48□□□□□ -1.21
GPN3-209ENST00000551079 PLS3P13797 630 aa7.48□□□□□ -1.21
GPN3-209ENST00000551079 SSPNQ14714 243 aa7.48□□□□□ -1.21
GPN3-209ENST00000551079 MICAL1Q8TDZ2 1067 aa7.48□□□□□ -1.21
GPN3-209ENST00000551079 USP33Q8TEY7 942 aa7.48□□□□□ -1.21
GPN3-209ENST00000551079 EPN3Q9H201 632 aa7.48□□□□□ -1.21
GPN3-209ENST00000551079 GPRC5CQ9NQ84 441 aa7.48□□□□□ -1.21
GPN3-209ENST00000551079 CLEC1BQ9P126 229 aa7.48□□□□□ -1.21
GPN3-209ENST00000551079 RWDD3Q9Y3V2 267 aa7.48□□□□□ -1.21
GPN3-209ENST00000551079 PCDHA5Q9Y5H7 936 aa7.48□□□□□ -1.21
GPN3-209ENST00000551079 C7orf72A4D263 438 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 GJB6O95452 261 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 ITGAVP06756 1048 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 THBDP07204 575 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 PFKLP17858 780 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 PI3P19957 117 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 HOXC12P31275 282 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 ZNF200P98182 395 aaPredicted RBP7.47□□□□□ -1.21
GPN3-209ENST00000551079 TCERG1LQ5VWI1 586 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 MRM1Q6IN84 353 aaKnown RBP7.47□□□□□ -1.21
GPN3-209ENST00000551079 ZNF227Q86WZ6 799 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 IGDCC3Q8IVU1 814 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 LGR4Q9BXB1 951 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.47□□□□□ -1.21
GPN3-209ENST00000551079 GULP1Q9UBP9 304 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 IRS2Q9Y4H2 1338 aa7.47□□□□□ -1.21
GPN3-209ENST00000551079 ADAMTS20P59510 1910 aa7.46□□□□□ -1.21
GPN3-209ENST00000551079 AGRPO00253 132 aa7.46□□□□□ -1.22
GPN3-209ENST00000551079 ZC3H6P61129 1189 aaKnown RBP7.46□□□□□ -1.22
GPN3-209ENST00000551079 TARBP2Q15633 366 aaKnown RBP7.46□□□□□ -1.22
GPN3-209ENST00000551079 IQCEQ6IPM2 695 aa7.46□□□□□ -1.22
GPN3-209ENST00000551079 ANKS3Q6ZW76 656 aa7.46□□□□□ -1.22
GPN3-209ENST00000551079 NETO2Q8NC67 525 aa7.46□□□□□ -1.22
GPN3-209ENST00000551079 BTN2A2Q8WVV5 523 aa7.46□□□□□ -1.22
GPN3-209ENST00000551079 HNRNPLLQ8WVV9 542 aaKnown RBP7.46□□□□□ -1.22
GPN3-209ENST00000551079 CCDC140Q96MF4 163 aa7.46□□□□□ -1.22
GPN3-209ENST00000551079 NUDT5Q9UKK9 219 aa7.46□□□□□ -1.22
GPN3-209ENST00000551079 ZC3H12DA2A288 527 aaKnown RBP7.45□□□□□ -1.22
GPN3-209ENST00000551079 BUB1BO60566 1050 aaPredicted RBP7.45□□□□□ -1.22
GPN3-209ENST00000551079 SNRPB2P08579 225 aaKnown RBP7.45□□□□□ -1.22
GPN3-209ENST00000551079 PRR5P85299 388 aa7.45□□□□□ -1.22
GPN3-209ENST00000551079 E4F1Q66K89 784 aaPredicted RBP7.45□□□□□ -1.22
GPN3-209ENST00000551079 PEX11GQ96HA9 241 aa7.45□□□□□ -1.22
GPN3-209ENST00000551079 MTA3Q9BTC8 594 aa7.45□□□□□ -1.22
GPN3-209ENST00000551079 HCFC2Q9Y5Z7 792 aa7.45□□□□□ -1.22
GPN3-209ENST00000551079 TBX1O43435 398 aa7.44□□□□□ -1.22
GPN3-209ENST00000551079 PPP1R11O60927 126 aaPredicted RBP7.44□□□□□ -1.22
GPN3-209ENST00000551079 CPP00450 1065 aa7.44□□□□□ -1.22
GPN3-209ENST00000551079 NCKAP1LP55160 1127 aa7.44□□□□□ -1.22
GPN3-209ENST00000551079 DDR2Q16832 855 aa7.44□□□□□ -1.22
GPN3-209ENST00000551079 CNKSR3Q6P9H4 555 aa7.44□□□□□ -1.22
GPN3-209ENST00000551079 TMEFF1Q8IYR6 380 aa7.44□□□□□ -1.22
GPN3-209ENST00000551079 NPLOC4Q8TAT6 608 aa7.44□□□□□ -1.22
GPN3-209ENST00000551079 PANK1Q8TE04 598 aa7.44□□□□□ -1.22
GPN3-209ENST00000551079 FRS2Q8WU20 508 aa7.44□□□□□ -1.22
GPN3-209ENST00000551079 ST7Q9NRC1 585 aa7.44□□□□□ -1.22
GPN3-209ENST00000551079 ZBTB7AO95365 584 aa7.43□□□□□ -1.22
GPN3-209ENST00000551079 FUCA1P04066 466 aa7.43□□□□□ -1.22
GPN3-209ENST00000551079 SCG5P05408 212 aa7.43□□□□□ -1.22
GPN3-209ENST00000551079 ECI1P42126 302 aa7.43□□□□□ -1.22
GPN3-209ENST00000551079 AFF3P51826 1226 aaKnown RBP7.43□□□□□ -1.22
GPN3-209ENST00000551079 SLC9A5Q14940 896 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms