RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 KCNF1Q9H3M0 494 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 GFOD1Q9NXC2 390 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 FHOD1Q9Y613 1164 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 ZMYM3Q14202 1370 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 TIAM1Q13009 1591 aa7.16□□□□□ -1.26
CPSF6-206ENST00000550987 BLACEA4D250 179 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 SHOXO15266 292 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 DLX3O60479 287 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 LRRN2O75325 713 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 VAMP4O75379 141 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 BMP3P12645 472 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 CDKN1CP49918 316 aaPredicted RBP7.15□□□□□ -1.26
CPSF6-206ENST00000550987 HTRA3P83110 453 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 AMPD2Q01433 879 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 NRG1Q02297 640 aaPredicted RBP7.15□□□□□ -1.26
CPSF6-206ENST00000550987 CDK5R2Q13319 367 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 SGO2Q562F6 1265 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 HSP90AB2PQ58FF8 381 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 ODR4Q5SWX8 454 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 PPM1KQ8N3J5 372 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 TOP6BLQ8N6T0 577 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 BEND7Q8N7W2 519 aaPredicted RBP7.15□□□□□ -1.26
CPSF6-206ENST00000550987 DDX1Q92499 740 aaKnown RBP7.15□□□□□ -1.26
CPSF6-206ENST00000550987 PTPRN2Q92932 1015 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 LENG1Q96BZ8 264 aaPredicted RBP7.15□□□□□ -1.26
CPSF6-206ENST00000550987 NACC1Q96RE7 527 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 CHPF2Q9P2E5 772 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 TMEM94Q12767 1356 aa7.15□□□□□ -1.26
CPSF6-206ENST00000550987 FAM95CA0A1B0GW59 222 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 GSG1L2A8MUP6 293 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 C9orf172C9J069 976 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 MEIS1O00470 390 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 CBX7O95931 251 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 CPP00450 1065 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 ITIH2P19823 946 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 IREB2P48200 963 aaKnown RBP7.14□□□□□ -1.27
CPSF6-206ENST00000550987 CLTCQ00610 1675 aaKnown RBP7.14□□□□□ -1.27
CPSF6-206ENST00000550987 SF1Q15637 639 aaKnown RBP7.14□□□□□ -1.27
CPSF6-206ENST00000550987 DPY19L1Q2PZI1 675 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 CWF19L1Q69YN2 538 aaKnown RBP7.14□□□□□ -1.27
CPSF6-206ENST00000550987 PAOXQ6QHF9 649 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 USP53Q70EK8 1073 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 UBE2R2Q712K3 238 aaPredicted RBP7.14□□□□□ -1.27
CPSF6-206ENST00000550987 RNF180Q86T96 592 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 SLC7A14Q8TBB6 771 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 UTP4Q969X6 686 aaKnown RBP7.14□□□□□ -1.27
CPSF6-206ENST00000550987 SLC52A2Q9HAB3 445 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 CYP26B1Q9NR63 512 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 TCEAL9Q9UHQ7 104 aa7.14□□□□□ -1.27
CPSF6-206ENST00000550987 GPR55Q9Y2T6 319 aaPredicted RBP7.14□□□□□ -1.27
CPSF6-206ENST00000550987 TNPO3Q9Y5L0 923 aaKnown RBP7.14□□□□□ -1.27
CPSF6-206ENST00000550987 TNS1Q9HBL0 1735 aaKnown RBP7.13□□□□□ -1.27
CPSF6-206ENST00000550987 DYNC1LI2O43237 492 aaPredicted RBP7.13□□□□□ -1.27
CPSF6-206ENST00000550987 ASLP04424 464 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 SPATA31C1P0DKV0 1188 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 MAP4P27816 1152 aaKnown RBP7.13□□□□□ -1.27
CPSF6-206ENST00000550987 EXOSC10Q01780 885 aaKnown RBP7.13□□□□□ -1.27
CPSF6-206ENST00000550987 POU4F1Q01851 419 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 STRN3Q13033 797 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 GRB10Q13322 594 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 SNW1Q13573 536 aaKnown RBP7.13□□□□□ -1.27
CPSF6-206ENST00000550987 CLEC16AQ2KHT3 1053 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 BRAPQ7Z569 592 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 WFDC12Q8WWY7 111 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 CCDC136Q96JN2 1154 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 UBL7Q96S82 380 aaPredicted RBP7.13□□□□□ -1.27
CPSF6-206ENST00000550987 POLR3GLQ9BT43 218 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 FAM126AQ9BYI3 521 aaPredicted RBP7.13□□□□□ -1.27
CPSF6-206ENST00000550987 NKX2-4Q9H2Z4 354 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 CHST7Q9NS84 486 aa7.13□□□□□ -1.27
CPSF6-206ENST00000550987 IQGAP2Q13576 1575 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 ATP7AQ04656 1500 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 DNAJC8O75937 253 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-206ENST00000550987 PMLP29590 882 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 GUCY2FP51841 1108 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 GFRA1P56159 465 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 MAP4K2Q12851 820 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 CFAP100Q494V2 611 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 BRDTQ58F21 947 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-206ENST00000550987 TRIM61Q5EBN2 209 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 SFRP5Q5T4F7 317 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 FMNL3Q8IVF7 1028 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 TMEM145Q8NBT3 493 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 COX4I2Q96KJ9 171 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 SNX27Q96L92 541 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 PRDM5Q9NQX1 630 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-206ENST00000550987 PRR13Q9NZ81 148 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 NUP188Q5SRE5 1749 aa7.12□□□□□ -1.27
CPSF6-206ENST00000550987 CAMSAP2Q08AD1 1489 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 DISP2A7MBM2 1401 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-206ENST00000550987 B4E1Z4 1266 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 KPNA6O60684 536 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 C6orf222P0C671 652 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-206ENST00000550987 JMJD7P0C870 316 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 NOS3P29474 1203 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 IGFALSP35858 605 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 NOP2P46087 812 aaKnown RBP7.11□□□□□ -1.27
CPSF6-206ENST00000550987 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms