RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 PNMA2Q9UL42 364 aa25.54■■□□□ 1.68
SMARCC2-210ENST00000550519 UMODL1Q5DID0 1318 aa25.54■■□□□ 1.68
SMARCC2-210ENST00000550519 CCDC171Q6TFL3 1326 aa25.54■■□□□ 1.68
SMARCC2-210ENST00000550519 LCTP09848 1927 aa25.53■■□□□ 1.68
SMARCC2-210ENST00000550519 GRXCR1A8MXD5 290 aa25.53■■□□□ 1.68
SMARCC2-210ENST00000550519 SNHG28P0DPA3 235 aa25.53■■□□□ 1.68
SMARCC2-210ENST00000550519 PBX2P40425 430 aa25.53■■□□□ 1.68
SMARCC2-210ENST00000550519 ZNF543Q08ER8 600 aa25.53■■□□□ 1.68
SMARCC2-210ENST00000550519 MFSD6Q6ZSS7 791 aa25.53■■□□□ 1.68
SMARCC2-210ENST00000550519 HERVK_113Q902F9 699 aa25.53■■□□□ 1.68
SMARCC2-210ENST00000550519 LNPKQ9C0E8 428 aa25.53■■□□□ 1.68
SMARCC2-210ENST00000550519 TRPV6Q9H1D0 765 aa25.53■■□□□ 1.68
SMARCC2-210ENST00000550519 VCANP13611 3396 aa25.52■■□□□ 1.68
SMARCC2-210ENST00000550519 RBM47A0AV96 593 aaKnown RBP25.52■■□□□ 1.68
SMARCC2-210ENST00000550519 PTPDC1A2A3K4 754 aa25.52■■□□□ 1.68
SMARCC2-210ENST00000550519 TRIM6-TRIM34B2RNG4 842 aa25.52■■□□□ 1.68
SMARCC2-210ENST00000550519 B4GALT4O60513 344 aa25.52■■□□□ 1.68
SMARCC2-210ENST00000550519 PSMC6P62333 389 aa25.52■■□□□ 1.68
SMARCC2-210ENST00000550519 TBC1D10CQ8IV04 446 aa25.52■■□□□ 1.68
SMARCC2-210ENST00000550519 NOC4LQ9BVI4 516 aaKnown RBP25.52■■□□□ 1.68
SMARCC2-210ENST00000550519 WDR11Q9BZH6 1224 aa25.52■■□□□ 1.68
SMARCC2-210ENST00000550519 SLC30A10Q6XR72 485 aa25.51■■□□□ 1.67
SMARCC2-210ENST00000550519 WDR19Q8NEZ3 1342 aa25.51■■□□□ 1.67
SMARCC2-210ENST00000550519 FGBP02675 491 aa25.5■■□□□ 1.67
SMARCC2-210ENST00000550519 RNF207Q6ZRF8 634 aa25.5■■□□□ 1.67
SMARCC2-210ENST00000550519 SMC5Q8IY18 1101 aa25.5■■□□□ 1.67
SMARCC2-210ENST00000550519 RILPL2Q969X0 211 aa25.5■■□□□ 1.67
SMARCC2-210ENST00000550519 ALDH8A1Q9H2A2 487 aaPredicted RBP25.5■■□□□ 1.67
SMARCC2-210ENST00000550519 RNF41Q9H4P4 317 aaPredicted RBP25.5■■□□□ 1.67
SMARCC2-210ENST00000550519 CXXC1Q9P0U4 656 aaPredicted RBP25.5■■□□□ 1.67
SMARCC2-210ENST00000550519 EDNRBP24530 442 aa25.49■■□□□ 1.67
SMARCC2-210ENST00000550519 CALML3P27482 149 aa25.49■■□□□ 1.67
SMARCC2-210ENST00000550519 MFAP1P55081 439 aaKnown RBP25.49■■□□□ 1.67
SMARCC2-210ENST00000550519 CCL23P55773 120 aa25.49■■□□□ 1.67
SMARCC2-210ENST00000550519 RPS6P62753 249 aaKnown RBP25.49■■□□□ 1.67
SMARCC2-210ENST00000550519 AAMPQ13685 434 aa25.49■■□□□ 1.67
SMARCC2-210ENST00000550519 WNT8AQ9H1J5 351 aa25.49■■□□□ 1.67
SMARCC2-210ENST00000550519 MTIF3Q9H2K0 278 aaKnown RBP25.49■■□□□ 1.67
SMARCC2-210ENST00000550519 POLR3EQ9NVU0 708 aa25.49■■□□□ 1.67
SMARCC2-210ENST00000550519 CHD9Q3L8U1 2897 aa25.48■■□□□ 1.67
SMARCC2-210ENST00000550519 SDSP20132 328 aa25.48■■□□□ 1.67
SMARCC2-210ENST00000550519 PURAQ00577 322 aaKnown RBP25.48■■□□□ 1.67
SMARCC2-210ENST00000550519 USP38Q8NB14 1042 aa25.48■■□□□ 1.67
SMARCC2-210ENST00000550519 ESR2Q92731 530 aa25.48■■□□□ 1.67
SMARCC2-210ENST00000550519 NEDD4P46934 1319 aa25.47■■□□□ 1.67
SMARCC2-210ENST00000550519 CPT1AP50416 773 aa25.47■■□□□ 1.67
SMARCC2-210ENST00000550519 GPATCH4Q5T3I0 446 aaKnown RBP25.47■■□□□ 1.67
SMARCC2-210ENST00000550519 DGKHQ86XP1 1220 aa25.47■■□□□ 1.67
SMARCC2-210ENST00000550519 DNERQ8NFT8 737 aa25.47■■□□□ 1.67
SMARCC2-210ENST00000550519 VWCEQ96DN2 955 aa25.47■■□□□ 1.67
SMARCC2-210ENST00000550519 OSBPL3Q9H4L5 887 aa25.47■■□□□ 1.67
SMARCC2-210ENST00000550519 TTC28Q96AY4 2481 aa25.46■■□□□ 1.67
SMARCC2-210ENST00000550519 NT5C2P49902 561 aa25.46■■□□□ 1.67
SMARCC2-210ENST00000550519 PDE4DQ08499 809 aa25.46■■□□□ 1.67
SMARCC2-210ENST00000550519 RAB30Q15771 203 aa25.46■■□□□ 1.67
SMARCC2-210ENST00000550519 OTOP2Q7RTS6 562 aa25.46■■□□□ 1.67
SMARCC2-210ENST00000550519 PLEKHM2Q8IWE5 1019 aa25.46■■□□□ 1.67
SMARCC2-210ENST00000550519 OR6J1Q8NGC5 347 aa25.46■■□□□ 1.67
SMARCC2-210ENST00000550519 MSRAQ9UJ68 235 aa25.46■■□□□ 1.67
SMARCC2-210ENST00000550519 ZNF213O14771 459 aa25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 NKRFO15226 690 aaKnown RBP eCLIP25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 SUPT20HL2P0C7V6 817 aa25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 B4GALNT3Q6L9W6 998 aa25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 RPUSD2Q8IZ73 545 aaKnown RBP25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 RGS22Q8NE09 1264 aa25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 GAS2L1Q99501 681 aaPredicted RBP25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 MPHOSPH6Q99547 160 aaKnown RBP25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 ZKSCAN3Q9BRR0 538 aa25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 RWDD1Q9H446 243 aaPredicted RBP25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 PRDM12Q9H4Q4 367 aa25.45■■□□□ 1.66
SMARCC2-210ENST00000550519 SPTBN5Q9NRC6 3674 aaKnown RBP25.44■■□□□ 1.66
SMARCC2-210ENST00000550519 MYL3P08590 195 aa25.44■■□□□ 1.66
SMARCC2-210ENST00000550519 GOLGA8HP0CJ92 632 aa25.44■■□□□ 1.66
SMARCC2-210ENST00000550519 PPP2R5BQ15173 497 aa25.44■■□□□ 1.66
SMARCC2-210ENST00000550519 CHD1LQ86WJ1 897 aa25.44■■□□□ 1.66
SMARCC2-210ENST00000550519 SCFD2Q8WU76 684 aa25.44■■□□□ 1.66
SMARCC2-210ENST00000550519 MTG1Q9BT17 334 aaPredicted RBP25.44■■□□□ 1.66
SMARCC2-210ENST00000550519 TRMT13Q9NUP7 481 aaKnown RBP25.44■■□□□ 1.66
SMARCC2-210ENST00000550519 TNKSO95271 1327 aa25.43■■□□□ 1.66
SMARCC2-210ENST00000550519 A6NJR5 290 aa25.43■■□□□ 1.66
SMARCC2-210ENST00000550519 ANKS1AQ92625 1134 aa25.43■■□□□ 1.66
SMARCC2-210ENST00000550519 SCLYQ96I15 445 aa25.43■■□□□ 1.66
SMARCC2-210ENST00000550519 UBA5Q9GZZ9 404 aa25.43■■□□□ 1.66
SMARCC2-210ENST00000550519 MAF1Q9H063 256 aa25.43■■□□□ 1.66
SMARCC2-210ENST00000550519 CPVLQ9H3G5 476 aa25.43■■□□□ 1.66
SMARCC2-210ENST00000550519 GPHNQ9NQX3 736 aaPredicted RBP25.43■■□□□ 1.66
SMARCC2-210ENST00000550519 YBX2Q9Y2T7 364 aaKnown RBP25.43■■□□□ 1.66
SMARCC2-210ENST00000550519 CYP2C9P11712 490 aa25.42■■□□□ 1.66
SMARCC2-210ENST00000550519 NUCB1Q02818 461 aa25.42■■□□□ 1.66
SMARCC2-210ENST00000550519 USH1GQ495M9 461 aa25.42■■□□□ 1.66
SMARCC2-210ENST00000550519 BRDTQ58F21 947 aaPredicted RBP25.42■■□□□ 1.66
SMARCC2-210ENST00000550519 CCDC178Q5BJE1 867 aa25.42■■□□□ 1.66
SMARCC2-210ENST00000550519 PNMA1Q8ND90 353 aa25.42■■□□□ 1.66
SMARCC2-210ENST00000550519 SYMPKQ92797 1274 aaKnown RBP25.42■■□□□ 1.66
SMARCC2-210ENST00000550519 NKX2-4Q9H2Z4 354 aa25.42■■□□□ 1.66
SMARCC2-210ENST00000550519 RAD50Q92878 1312 aa25.41■■□□□ 1.66
SMARCC2-210ENST00000550519 B4DLN1 442 aa25.41■■□□□ 1.66
SMARCC2-210ENST00000550519 KPNA6O60684 536 aa25.41■■□□□ 1.66
SMARCC2-210ENST00000550519 KDM4AO75164 1064 aa25.41■■□□□ 1.66
SMARCC2-210ENST00000550519 IGHDP01880 384 aa25.41■■□□□ 1.66
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