RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 CLEC4DQ8WXI8 215 aa22.28■■□□□ 1.16
LETMD1-224ENST00000550446 TIFAQ96CG3 184 aa22.28■■□□□ 1.16
LETMD1-224ENST00000550446 YTHDC1Q96MU7 727 aaKnown RBP22.28■■□□□ 1.16
LETMD1-224ENST00000550446 ZKSCAN3Q9BRR0 538 aa22.28■■□□□ 1.16
LETMD1-224ENST00000550446 WDR11Q9BZH6 1224 aa22.28■■□□□ 1.16
LETMD1-224ENST00000550446 HIPK3Q9H422 1215 aa22.28■■□□□ 1.16
LETMD1-224ENST00000550446 ZNF213O14771 459 aa22.27■■□□□ 1.16
LETMD1-224ENST00000550446 PCP11498 1178 aaKnown RBP22.27■■□□□ 1.16
LETMD1-224ENST00000550446 ZNF543Q08ER8 600 aa22.27■■□□□ 1.16
LETMD1-224ENST00000550446 DUSP28Q4G0W2 176 aa22.27■■□□□ 1.16
LETMD1-224ENST00000550446 SLC30A10Q6XR72 485 aa22.27■■□□□ 1.16
LETMD1-224ENST00000550446 RNF207Q6ZRF8 634 aa22.27■■□□□ 1.16
LETMD1-224ENST00000550446 CHD1LQ86WJ1 897 aa22.27■■□□□ 1.16
LETMD1-224ENST00000550446 SMC5Q8IY18 1101 aa22.27■■□□□ 1.16
LETMD1-224ENST00000550446 RNF41Q9H4P4 317 aaPredicted RBP22.27■■□□□ 1.16
LETMD1-224ENST00000550446 ZNF576Q9H609 170 aa22.27■■□□□ 1.16
LETMD1-224ENST00000550446 ZMYM6O95789 1325 aa22.27■■□□□ 1.16
LETMD1-224ENST00000550446 IGHDP01880 384 aa22.26■■□□□ 1.15
LETMD1-224ENST00000550446 GOLGA8HP0CJ92 632 aa22.26■■□□□ 1.15
LETMD1-224ENST00000550446 PBX2P40425 430 aa22.26■■□□□ 1.15
LETMD1-224ENST00000550446 CCL23P55773 120 aa22.26■■□□□ 1.15
LETMD1-224ENST00000550446 PSRC1Q6PGN9 363 aaPredicted RBP22.26■■□□□ 1.15
LETMD1-224ENST00000550446 PLEKHM2Q8IWE5 1019 aa22.26■■□□□ 1.15
LETMD1-224ENST00000550446 ESR2Q92731 530 aa22.26■■□□□ 1.15
LETMD1-224ENST00000550446 IL23AQ9NPF7 189 aa22.26■■□□□ 1.15
LETMD1-224ENST00000550446 UMODL1Q5DID0 1318 aa22.26■■□□□ 1.15
LETMD1-224ENST00000550446 B4GALT4O60513 344 aa22.25■■□□□ 1.15
LETMD1-224ENST00000550446 FGBP02675 491 aa22.25■■□□□ 1.15
LETMD1-224ENST00000550446 AAMPQ13685 434 aa22.25■■□□□ 1.15
LETMD1-224ENST00000550446 RASIP1Q5U651 963 aa22.25■■□□□ 1.15
LETMD1-224ENST00000550446 CWC27Q6UX04 472 aaKnown RBP22.25■■□□□ 1.15
LETMD1-224ENST00000550446 SEZ6LQ9BYH1 1024 aa22.25■■□□□ 1.15
LETMD1-224ENST00000550446 UBA5Q9GZZ9 404 aa22.25■■□□□ 1.15
LETMD1-224ENST00000550446 PNMA2Q9UL42 364 aa22.25■■□□□ 1.15
LETMD1-224ENST00000550446 VCANP13611 3396 aa22.25■■□□□ 1.15
LETMD1-224ENST00000550446 MYL3P08590 195 aa22.24■■□□□ 1.15
LETMD1-224ENST00000550446 SNHG28P0DPA3 235 aa22.24■■□□□ 1.15
LETMD1-224ENST00000550446 RPS6P62753 249 aaKnown RBP22.24■■□□□ 1.15
LETMD1-224ENST00000550446 PDE4DQ08499 809 aa22.24■■□□□ 1.15
LETMD1-224ENST00000550446 NOC4LQ9BVI4 516 aaKnown RBP22.24■■□□□ 1.15
LETMD1-224ENST00000550446 PBX4Q9BYU1 374 aa22.24■■□□□ 1.15
LETMD1-224ENST00000550446 CPVLQ9H3G5 476 aa22.24■■□□□ 1.15
LETMD1-224ENST00000550446 NEDD4P46934 1319 aa22.24■■□□□ 1.15
LETMD1-224ENST00000550446 LOC102724159A0A0B4J2E5 919 aa22.23■■□□□ 1.15
LETMD1-224ENST00000550446 RBM47A0AV96 593 aaKnown RBP22.23■■□□□ 1.15
LETMD1-224ENST00000550446 NUCB1Q02818 461 aa22.23■■□□□ 1.15
LETMD1-224ENST00000550446 PWP2Q15269 919 aaKnown RBP22.23■■□□□ 1.15
LETMD1-224ENST00000550446 USH1GQ495M9 461 aa22.23■■□□□ 1.15
LETMD1-224ENST00000550446 OTOP2Q7RTS6 562 aa22.23■■□□□ 1.15
LETMD1-224ENST00000550446 DGKHQ86XP1 1220 aa22.23■■□□□ 1.15
LETMD1-224ENST00000550446 OR6J1Q8NGC5 347 aa22.23■■□□□ 1.15
LETMD1-224ENST00000550446 HERVK_113Q902F9 699 aa22.23■■□□□ 1.15
LETMD1-224ENST00000550446 MPHOSPH6Q99547 160 aaKnown RBP22.23■■□□□ 1.15
LETMD1-224ENST00000550446 ALDH8A1Q9H2A2 487 aaPredicted RBP22.23■■□□□ 1.15
LETMD1-224ENST00000550446 GPHNQ9NQX3 736 aaPredicted RBP22.23■■□□□ 1.15
LETMD1-224ENST00000550446 DIAPH3Q9NSV4 1193 aa22.23■■□□□ 1.15
LETMD1-224ENST00000550446 POLR3EQ9NVU0 708 aa22.23■■□□□ 1.15
LETMD1-224ENST00000550446 CXXC1Q9P0U4 656 aaPredicted RBP22.23■■□□□ 1.15
LETMD1-224ENST00000550446 KDM4AO75164 1064 aa22.22■■□□□ 1.15
LETMD1-224ENST00000550446 CPT1AP50416 773 aa22.22■■□□□ 1.15
LETMD1-224ENST00000550446 GPATCH4Q5T3I0 446 aaKnown RBP22.22■■□□□ 1.15
LETMD1-224ENST00000550446 OSBPL3Q9H4L5 887 aa22.22■■□□□ 1.15
LETMD1-224ENST00000550446 PURAQ00577 322 aaKnown RBP22.21■■□□□ 1.15
LETMD1-224ENST00000550446 IQCA1Q86XH1 822 aa22.21■■□□□ 1.15
LETMD1-224ENST00000550446 PNMA1Q8ND90 353 aa22.21■■□□□ 1.15
LETMD1-224ENST00000550446 MTIF3Q9H2K0 278 aaKnown RBP22.21■■□□□ 1.15
LETMD1-224ENST00000550446 TRMT13Q9NUP7 481 aaKnown RBP22.21■■□□□ 1.15
LETMD1-224ENST00000550446 MSRAQ9UJ68 235 aa22.21■■□□□ 1.15
LETMD1-224ENST00000550446 WDR19Q8NEZ3 1342 aa22.21■■□□□ 1.15
LETMD1-224ENST00000550446 CYP2C9P11712 490 aa22.2■■□□□ 1.14
LETMD1-224ENST00000550446 BRDTQ58F21 947 aaPredicted RBP22.2■■□□□ 1.14
LETMD1-224ENST00000550446 CCDC178Q5BJE1 867 aa22.2■■□□□ 1.14
LETMD1-224ENST00000550446 RPUSD2Q8IZ73 545 aaKnown RBP22.2■■□□□ 1.14
LETMD1-224ENST00000550446 DNERQ8NFT8 737 aa22.2■■□□□ 1.14
LETMD1-224ENST00000550446 EXOC6Q8TAG9 804 aa22.2■■□□□ 1.14
LETMD1-224ENST00000550446 COPS5Q92905 334 aa22.2■■□□□ 1.14
LETMD1-224ENST00000550446 SCLYQ96I15 445 aa22.2■■□□□ 1.14
LETMD1-224ENST00000550446 MTG1Q9BT17 334 aaPredicted RBP22.2■■□□□ 1.14
LETMD1-224ENST00000550446 WNT8AQ9H1J5 351 aa22.2■■□□□ 1.14
LETMD1-224ENST00000550446 KAT14Q9H8E8 782 aa22.2■■□□□ 1.14
LETMD1-224ENST00000550446 B4DLN1 442 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 B4E1Z4 1266 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 SUPT20HL2P0C7V6 817 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 TXNP10599 105 aaKnown RBP22.19■■□□□ 1.14
LETMD1-224ENST00000550446 MRPL12P52815 198 aaKnown RBP22.19■■□□□ 1.14
LETMD1-224ENST00000550446 PPP2R5BQ15173 497 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 FAM47CQ5HY64 1035 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 RGS22Q8NE09 1264 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 SCFD2Q8WU76 684 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 PPP1R13LQ8WUF5 828 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 PPM1EQ8WY54 764 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 TBC1D5Q92609 795 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 ZSCAN10Q96SZ4 725 aaPredicted RBP22.19■■□□□ 1.14
LETMD1-224ENST00000550446 PRDM12Q9H4Q4 367 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 VAT1LQ9HCJ6 419 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 ZSWIM5Q9P217 1185 aa22.19■■□□□ 1.14
LETMD1-224ENST00000550446 TNKSO95271 1327 aa22.18■■□□□ 1.14
LETMD1-224ENST00000550446 HIP1O00291 1037 aa22.18■■□□□ 1.14
LETMD1-224ENST00000550446 EDNRBP24530 442 aa22.18■■□□□ 1.14
LETMD1-224ENST00000550446 RAB30Q15771 203 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms