RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TBC1D1Q86TI0 1168 aaPredicted RBP13.4□□□□□ -0.26
VDR-208ENST00000550325 RASGRP4Q8TDF6 673 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 CASKIN2Q8WXE0 1202 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 SEC16BQ96JE7 1060 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 NOX5Q96PH1 765 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 CCDC113Q9H0I3 377 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 EPB41L4AQ9HCS5 686 aaPredicted RBP13.4□□□□□ -0.26
VDR-208ENST00000550325 NALCNQ8IZF0 1738 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 EEF1GP26641 437 aaKnown RBP13.4□□□□□ -0.26
VDR-208ENST00000550325 ASIC1P78348 528 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 FAM133BQ5BKY9 247 aaKnown RBP13.4□□□□□ -0.26
VDR-208ENST00000550325 SELENOSQ9BQE4 189 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 OSBPL7Q9BZF2 842 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 ACTR5Q9H9F9 607 aaPredicted RBP13.4□□□□□ -0.26
VDR-208ENST00000550325 GOPCQ9HD26 462 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 GGT7Q9UJ14 662 aa13.4□□□□□ -0.26
VDR-208ENST00000550325 C21orf2O43822 256 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 SCTRP47872 440 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 PDE4DQ08499 809 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 GKAP1Q5VSY0 366 aaPredicted RBP13.39□□□□□ -0.27
VDR-208ENST00000550325 NUP58Q9BVL2 599 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 HEG1Q9ULI3 1381 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 TNKSO95271 1327 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 HMGB1P1B2RPK0 211 aaPredicted RBP13.39□□□□□ -0.27
VDR-208ENST00000550325 CCNHP51946 323 aaPredicted RBP13.39□□□□□ -0.27
VDR-208ENST00000550325 CCDC50Q8IVM0 306 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 TAF4BQ92750 862 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 DDX17Q92841 729 aaKnown RBP13.39□□□□□ -0.27
VDR-208ENST00000550325 CCDC47Q96A33 483 aaKnown RBP13.39□□□□□ -0.27
VDR-208ENST00000550325 STAMBPL1Q96FJ0 436 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 KIF9Q9HAQ2 790 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 L3MBTL1Q9Y468 752 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 MAP3K15Q6ZN16 1313 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 SMIM22K7EJ46 135 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 SLC8A1P32418 973 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 KRT71Q3SY84 523 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 NBPF10Q6P3W6 841 aaKnown RBP13.39□□□□□ -0.27
VDR-208ENST00000550325 NBPF15Q8N660 670 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 FAXDC2Q96IV6 333 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 TACC3Q9Y6A5 838 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 MRC1P22897 1456 aa13.39□□□□□ -0.27
VDR-208ENST00000550325 BMP15O95972 392 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 SLC1A4P43007 532 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 CRYMQ14894 314 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 ANKRD20A8PQ5CZ79 823 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 IFIT1BQ5T764 474 aaKnown RBP13.38□□□□□ -0.27
VDR-208ENST00000550325 CATIPQ7Z7H3 387 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 TAX1BP1Q86VP1 789 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 ADSSL1Q8N142 457 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 MDM1Q8TC05 714 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 SDR42E1Q8WUS8 393 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 CAVIN3Q969G5 261 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 ABCF2Q9UG63 623 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 PIK3C2AO00443 1686 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 MST1RQ04912 1400 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 A0A1W2PQC6 194 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 SRGNP10124 158 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 PDXDC2PQ6P474 469 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 IFNL2Q8IZJ0 200 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 IQCKQ8N0W5 287 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 NSMCE1Q8WV22 266 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 ARHGAP20Q9P2F6 1191 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 LEMD3Q9Y2U8 911 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 MYH10P35580 1976 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 TMCO5BA8MYB1 307 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 CIAO1O76071 339 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 FAM228AQ86W67 206 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 AP1M1Q9BXS5 423 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 SALL4Q9UJQ4 1053 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 PDS5AQ29RF7 1337 aaKnown RBP13.38□□□□□ -0.27
VDR-208ENST00000550325 WDR17Q8IZU2 1322 aa13.38□□□□□ -0.27
VDR-208ENST00000550325 LRRC53A6NM62 1247 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
VDR-208ENST00000550325 PALMO75781 387 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 KIF4AO95239 1232 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 PHKG2P15735 406 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 MAGOHP61326 146 aaKnown RBP13.37□□□□□ -0.27
VDR-208ENST00000550325 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
VDR-208ENST00000550325 MAGOHBQ96A72 148 aaKnown RBP13.37□□□□□ -0.27
VDR-208ENST00000550325 MTMR8Q96EF0 704 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 ITGB3BPQ13352 177 aaPredicted RBP13.37□□□□□ -0.27
VDR-208ENST00000550325 YTHDF3Q7Z739 585 aaKnown RBP13.37□□□□□ -0.27
VDR-208ENST00000550325 LCORLQ8N3X6 602 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 ZNF507Q8TCN5 953 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 GOLPH3Q9H4A6 298 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 NOD2Q9HC29 1040 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 KCNK3O14649 394 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 EPHB6O15197 1021 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 RAD51CO43502 376 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 CEP104O60308 925 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 ANKRD40Q6AI12 368 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 SHISA4Q96DD7 197 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 TLR10Q9BXR5 811 aa13.37□□□□□ -0.27
VDR-208ENST00000550325 CYP2D7A0A087X1C5 515 aa13.36□□□□□ -0.27
VDR-208ENST00000550325 MYBL1P10243 752 aa13.36□□□□□ -0.27
VDR-208ENST00000550325 ITGA6P23229 1130 aa13.36□□□□□ -0.27
VDR-208ENST00000550325 MEA1Q16626 185 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms