RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 MFAP3LO75121 409 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 PABPC4Q13310 644 aaKnown RBP eCLIP18.72■□□□□ 0.594e-7■■■□□ 17
ATXN2-219ENST00000550104 E4F1Q66K89 784 aaPredicted RBP18.72■□□□□ 0.59
ATXN2-219ENST00000550104 PCDHB13Q9Y5F0 798 aa18.72■□□□□ 0.59
ATXN2-219ENST00000550104 ACTN4O43707 911 aaKnown RBP18.71■□□□□ 0.59
ATXN2-219ENST00000550104 RASA1P20936 1047 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 CRKP46108 304 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 PANX2Q96RD6 677 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 DAGLAQ9Y4D2 1042 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 RGPD2P0DJD1 1756 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 FAM170AA1A519 330 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 ARHGEF35A5YM69 484 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 hCG_1984214I3L0E3 225 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 CCDC172P0C7W6 258 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 GPR161Q8N6U8 529 aaKnown RBP18.71■□□□□ 0.59
ATXN2-219ENST00000550104 ZNF713Q8N859 430 aaPredicted RBP18.71■□□□□ 0.59
ATXN2-219ENST00000550104 MASTLQ96GX5 879 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 LSM14BQ9BX40 385 aaKnown RBP18.71■□□□□ 0.59
ATXN2-219ENST00000550104 VGLL3A8MV65 326 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 CALUO43852 315 aaPredicted RBP18.71■□□□□ 0.59
ATXN2-219ENST00000550104 VPS18Q9P253 973 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 FRMD4BQ9Y2L6 1034 aa18.71■□□□□ 0.59
ATXN2-219ENST00000550104 ENC1O14682 589 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 GAS7O60861 476 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 UBXN2AP68543 259 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 KLHL30Q0D2K2 578 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 SLFN12Q8IYM2 578 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 MXD3Q9BW11 206 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 ASIC2Q16515 512 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 PTF1AQ7RTS3 328 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 HDXQ7Z353 690 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 ANKRD13CQ8N6S4 541 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 DHX36Q9H2U1 1008 aaKnown RBP18.7■□□□□ 0.58
ATXN2-219ENST00000550104 HAUS4Q9H6D7 363 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 STK17AQ9UEE5 414 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 SAR1BQ9Y6B6 198 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 LMO7Q8WWI1 1683 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L10C9JJH3 530 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 SFMBT2Q5VUG0 894 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L15C9J2P7 530 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L13C9JLJ4 530 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L11C9JVI0 530 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L18D6R9N7 530 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L22D6RA61 530 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L17D6RBQ6 530 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L19D6RCP7 530 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L20D6RJB6 530 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 MEIS1O00470 390 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 RAD17O75943 681 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 MYCLP12524 364 aaPredicted RBP18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L24Q0WX57 530 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 CDC37Q16543 378 aaPredicted RBP18.7■□□□□ 0.58
ATXN2-219ENST00000550104 USP17L6PQ6QN14 398 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 FNBP4Q8N3X1 1017 aaPredicted RBP18.7■□□□□ 0.58
ATXN2-219ENST00000550104 CHURC1Q8WUH1 139 aa18.7■□□□□ 0.58
ATXN2-219ENST00000550104 SETQ01105 290 aaPredicted RBP18.69■□□□□ 0.58
ATXN2-219ENST00000550104 TTLL12Q14166 644 aaPredicted RBP18.69■□□□□ 0.58
ATXN2-219ENST00000550104 NIM1KQ8IY84 436 aa18.69■□□□□ 0.58
ATXN2-219ENST00000550104 FOXP2O15409 715 aa18.69■□□□□ 0.58
ATXN2-219ENST00000550104 ADAM9Q13443 819 aa18.69■□□□□ 0.58
ATXN2-219ENST00000550104 NSMFQ6X4W1 530 aa18.69■□□□□ 0.58
ATXN2-219ENST00000550104 SMAP1Q8IYB5 467 aaPredicted RBP18.69■□□□□ 0.58
ATXN2-219ENST00000550104 NOX5Q96PH1 765 aa18.69■□□□□ 0.58
ATXN2-219ENST00000550104 TDP2O95551 362 aa18.69■□□□□ 0.58
ATXN2-219ENST00000550104 SLC27A3Q5K4L6 730 aa18.69■□□□□ 0.58
ATXN2-219ENST00000550104 CC2D2BQ6DHV5 1058 aa18.69■□□□□ 0.58
ATXN2-219ENST00000550104 PPP4R3AQ6IN85 833 aa18.69■□□□□ 0.58
ATXN2-219ENST00000550104 IFT81Q8WYA0 676 aa18.69■□□□□ 0.58
ATXN2-219ENST00000550104 GCFC2P16383 781 aaKnown RBP18.68■□□□□ 0.58
ATXN2-219ENST00000550104 SP8Q8IXZ3 490 aa18.68■□□□□ 0.58
ATXN2-219ENST00000550104 RDH13Q8NBN7 331 aa18.68■□□□□ 0.58
ATXN2-219ENST00000550104 THAP9Q9H5L6 903 aa18.68■□□□□ 0.58
ATXN2-219ENST00000550104 BCCIPQ9P287 314 aaKnown RBP eCLIP18.68■□□□□ 0.58
ATXN2-219ENST00000550104 POLR2FP61218 127 aaKnown RBP18.68■□□□□ 0.58
ATXN2-219ENST00000550104 DPYDQ12882 1025 aa18.68■□□□□ 0.58
ATXN2-219ENST00000550104 MTF1Q14872 753 aa18.68■□□□□ 0.58
ATXN2-219ENST00000550104 MAATS1Q7Z4T9 603 aa18.68■□□□□ 0.58
ATXN2-219ENST00000550104 GDAP1L1Q96MZ0 367 aa18.68■□□□□ 0.58
ATXN2-219ENST00000550104 CDC23Q9UJX2 597 aa18.68■□□□□ 0.58
ATXN2-219ENST00000550104 TUBBP07437 444 aa18.68■□□□□ 0.58
ATXN2-219ENST00000550104 BMP3P12645 472 aa18.68■□□□□ 0.58
ATXN2-219ENST00000550104 TDRD3Q9H7E2 651 aaKnown RBP18.68■□□□□ 0.58
ATXN2-219ENST00000550104 PKN1Q16512 942 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 MB21D1Q8N884 522 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 SELENOOQ9BVL4 669 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 TMEM60Q9H2L4 133 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 H0YHG0 523 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 HOXA13P31271 388 aaPredicted RBP18.67■□□□□ 0.58
ATXN2-219ENST00000550104 SEPT2Q15019 361 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 SMCR8Q8TEV9 937 aaPredicted RBP18.67■□□□□ 0.58
ATXN2-219ENST00000550104 ARMCX3Q9UH62 379 aaPredicted RBP18.67■□□□□ 0.58
ATXN2-219ENST00000550104 GCOM1H8Y6P7 765 aaPredicted RBP18.67■□□□□ 0.58
ATXN2-219ENST00000550104 ZBTB5O15062 677 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 GH2P01242 217 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 POLR2MP0CAP2 368 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 EARS2Q5JPH6 523 aaKnown RBP18.67■□□□□ 0.58
ATXN2-219ENST00000550104 TTBK2Q6IQ55 1244 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 FBXO38Q6PIJ6 1188 aa18.67■□□□□ 0.58
ATXN2-219ENST00000550104 NBPF11Q86T75 865 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms