RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TMEM63BQ5T3F8 832 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 TSHZ3Q63HK5 1081 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 BTNL9Q6UXG8 535 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 KIAA1211Q6ZU35 1233 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 KCTD1Q719H9 257 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 ALDH8A1Q9H2A2 487 aaPredicted RBP11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 ADD3Q9UEY8 706 aaKnown RBP11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 ANAPC4Q9UJX5 808 aa11.67□□□□□ -0.54
TRAFD1-207ENST00000550051 TSPY2A6NKD2 308 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 ERC2O15083 957 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 FGRP09769 529 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 BMP1P13497 986 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 PTGS1P23219 599 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 PSMC6P62333 389 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 EEPD1Q7L9B9 569 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 RASEFQ8IZ41 740 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 PI4K2BQ8TCG2 481 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 ADAMTS19Q8TE59 1207 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 RANBP17Q9H2T7 1088 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 POLR3EQ9NVU0 708 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 CCPG1Q9ULG6 757 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 STX8Q9UNK0 236 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 LCTP09848 1927 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 LRRC37A2A6NM11 1700 aa11.66□□□□□ -0.54
TRAFD1-207ENST00000550051 FOXP2O15409 715 aa11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 KPNA6O60684 536 aa11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 ATP2A2P16615 1042 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 RABGGTBP53611 331 aa11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 SNAP25P60880 206 aa11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 PURAQ00577 322 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 BAATQ14032 418 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 FBXO16Q8IX29 292 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 PHOSPHO2Q8TCD6 241 aa11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 DCAF4Q8WV16 495 aa11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 PURBQ96QR8 312 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 UHRF1Q96T88 793 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 WDR11Q9BZH6 1224 aa11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 INCENPQ9NQS7 918 aa11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 PNMA2Q9UL42 364 aa11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 ISY1Q9ULR0 285 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 DDX49Q9Y6V7 483 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-207ENST00000550051 NCOR1O75376 2440 aa11.65□□□□□ -0.55
TRAFD1-207ENST00000550051 ORC4O43929 436 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 NMT2O60551 498 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 MYOGP15173 224 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 RFC2P35250 354 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 CPT1AP50416 773 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 ALDH5A1P51649 535 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 ALX1Q15699 326 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 AAK1Q2M2I8 961 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 PPP2R2DQ66LE6 453 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 NSMFQ6X4W1 530 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 CHMP4CQ96CF2 233 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 SCLYQ96I15 445 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 MTG1Q9BT17 334 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 TCP11L1Q9NUJ3 509 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 CHD7Q9P2D1 2997 aa11.64□□□□□ -0.55
TRAFD1-207ENST00000550051 TNKSO95271 1327 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 TCF20Q9UGU0 1960 aaKnown RBP11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 A6NJR5 290 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 NKRFO15226 690 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 CYP2C9P11712 490 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 ACTN1P12814 892 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 CTDSPL2Q05D32 466 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 TTLL4Q14679 1199 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 TMEM67Q5HYA8 995 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 TTBK2Q6IQ55 1244 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 NFRKBQ6P4R8 1299 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 TICAM2Q86XR7 235 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 IL27Q8NEV9 243 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 CLEC4DQ8WXI8 215 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 FSD1Q9BTV5 496 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 GPHNQ9NQX3 736 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 TRMT13Q9NUP7 481 aaKnown RBP11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 SCN5AQ14524 2016 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 SCN10AQ9Y5Y9 1956 aa11.63□□□□□ -0.55
TRAFD1-207ENST00000550051 ZBBXA8MT70 800 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 NFIBO00712 420 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 RANBP6O60518 1105 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 IQCF3P0C7M6 154 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 TOP1P11387 765 aaKnown RBP11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 EDNRBP24530 442 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 SLC16A2P36021 539 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 NBPF20Q3BBV1 942 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 BRDTQ58F21 947 aaPredicted RBP11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 SYDE2Q5VT97 1194 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 RGS22Q8NE09 1264 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 DNERQ8NFT8 737 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 TTC14Q96N46 770 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 TMEM47Q9BQJ4 181 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 MAF1Q9H063 256 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 MTCH2Q9Y6C9 303 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 REV3LO60673 3130 aa11.62□□□□□ -0.55
TRAFD1-207ENST00000550051 B4DLN1 442 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 MYL3P08590 195 aa11.61□□□□□ -0.55
TRAFD1-207ENST00000550051 MRPL12P52815 198 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms