RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 FGAP02671 866 aa18.18■□□□□ 0.5
RAB5C-205ENST00000550013 TOP1P11387 765 aaKnown RBP18.18■□□□□ 0.5
RAB5C-205ENST00000550013 ALDH5A1P51649 535 aaPredicted RBP18.18■□□□□ 0.5
RAB5C-205ENST00000550013 RAB30Q15771 203 aa18.18■□□□□ 0.5
RAB5C-205ENST00000550013 DUSP28Q4G0W2 176 aa18.18■□□□□ 0.5
RAB5C-205ENST00000550013 SYMPKQ92797 1274 aaKnown RBP18.18■□□□□ 0.5
RAB5C-205ENST00000550013 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
RAB5C-205ENST00000550013 MSRAQ9UJ68 235 aa18.18■□□□□ 0.5
RAB5C-205ENST00000550013 YBX2Q9Y2T7 364 aaKnown RBP18.18■□□□□ 0.5
RAB5C-205ENST00000550013 SCN5AQ14524 2016 aa18.18■□□□□ 0.5
RAB5C-205ENST00000550013 PTPDC1A2A3K4 754 aa18.17■□□□□ 0.5
RAB5C-205ENST00000550013 ADGRE1Q14246 886 aa18.17■□□□□ 0.5
RAB5C-205ENST00000550013 TJAP1Q5JTD0 557 aa18.17■□□□□ 0.5
RAB5C-205ENST00000550013 SLC30A10Q6XR72 485 aa18.17■□□□□ 0.5
RAB5C-205ENST00000550013 VWCEQ96DN2 955 aa18.17■□□□□ 0.5
RAB5C-205ENST00000550013 SCLYQ96I15 445 aa18.17■□□□□ 0.5
RAB5C-205ENST00000550013 SEZ6LQ9BYH1 1024 aa18.17■□□□□ 0.5
RAB5C-205ENST00000550013 ALDH8A1Q9H2A2 487 aaPredicted RBP18.17■□□□□ 0.5
RAB5C-205ENST00000550013 MTIF3Q9H2K0 278 aaKnown RBP18.17■□□□□ 0.5
RAB5C-205ENST00000550013 ADD3Q9UEY8 706 aaKnown RBP18.17■□□□□ 0.5
RAB5C-205ENST00000550013 ZBTB47Q9UFB7 747 aaPredicted RBP18.17■□□□□ 0.5
RAB5C-205ENST00000550013 REV3LO60673 3130 aa18.17■□□□□ 0.5
RAB5C-205ENST00000550013 PDE1AP54750 535 aa18.16■□□□□ 0.5
RAB5C-205ENST00000550013 HAND2P61296 217 aa18.16■□□□□ 0.5
RAB5C-205ENST00000550013 CLEC4DQ8WXI8 215 aa18.16■□□□□ 0.5
RAB5C-205ENST00000550013 WDR11Q9BZH6 1224 aa18.16■□□□□ 0.5
RAB5C-205ENST00000550013 TRMT13Q9NUP7 481 aaKnown RBP18.16■□□□□ 0.5
RAB5C-205ENST00000550013 SCN10AQ9Y5Y9 1956 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 MYL3P08590 195 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 PDHBP11177 359 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 CYP2C9P11712 490 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 CALML3P27482 149 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 RABGGTBP53611 331 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 PURAQ00577 322 aaKnown RBP18.15■□□□□ 0.5
RAB5C-205ENST00000550013 CCDC85BQ15834 202 aaPredicted RBP18.15■□□□□ 0.5
RAB5C-205ENST00000550013 MCMDC2Q4G0Z9 681 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 AKNAD1Q5T1N1 836 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 ZNF589Q86UQ0 364 aaPredicted RBP18.15■□□□□ 0.5
RAB5C-205ENST00000550013 PPP1R13LQ8WUF5 828 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 TCP11L1Q9NUJ3 509 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 MUC3AQ02505 3323 aa18.15■□□□□ 0.5
RAB5C-205ENST00000550013 RBM47A0AV96 593 aaKnown RBP18.14■□□□□ 0.49
RAB5C-205ENST00000550013 HSPD1P10809 573 aaKnown RBP18.14■□□□□ 0.49
RAB5C-205ENST00000550013 MYOGP15173 224 aa18.14■□□□□ 0.49
RAB5C-205ENST00000550013 IGFBP4P22692 258 aa18.14■□□□□ 0.49
RAB5C-205ENST00000550013 RRP1P56182 461 aaKnown RBP18.14■□□□□ 0.49
RAB5C-205ENST00000550013 NMIQ13287 307 aaPredicted RBP18.14■□□□□ 0.49
RAB5C-205ENST00000550013 OR6J1Q8NGC5 347 aa18.14■□□□□ 0.49
RAB5C-205ENST00000550013 CRBNQ96SW2 442 aa18.14■□□□□ 0.49
RAB5C-205ENST00000550013 SLC28A3Q9HAS3 691 aa18.14■□□□□ 0.49
RAB5C-205ENST00000550013 POLR3EQ9NVU0 708 aa18.14■□□□□ 0.49
RAB5C-205ENST00000550013 SLC4A7Q9Y6M7 1214 aa18.14■□□□□ 0.49
RAB5C-205ENST00000550013 TNKSO95271 1327 aa18.14■□□□□ 0.49
RAB5C-205ENST00000550013 TRANK1O15050 2925 aa18.14■□□□□ 0.49
RAB5C-205ENST00000550013 LOC102724159A0A0B4J2E5 919 aa18.13■□□□□ 0.49
RAB5C-205ENST00000550013 ZBBXA8MT70 800 aa18.13■□□□□ 0.49
RAB5C-205ENST00000550013 CPT1AP50416 773 aa18.13■□□□□ 0.49
RAB5C-205ENST00000550013 ZNF543Q08ER8 600 aa18.13■□□□□ 0.49
RAB5C-205ENST00000550013 TTLL4Q14679 1199 aa18.13■□□□□ 0.49
RAB5C-205ENST00000550013 PWP2Q15269 919 aaKnown RBP18.13■□□□□ 0.49
RAB5C-205ENST00000550013 RNF207Q6ZRF8 634 aa18.13■□□□□ 0.49
RAB5C-205ENST00000550013 TBC1D10CQ8IV04 446 aa18.13■□□□□ 0.49
RAB5C-205ENST00000550013 RPUSD2Q8IZ73 545 aaKnown RBP18.13■□□□□ 0.49
RAB5C-205ENST00000550013 RPS6P62753 249 aaKnown RBP18.12■□□□□ 0.49
RAB5C-205ENST00000550013 PDE4DQ08499 809 aa18.12■□□□□ 0.49
RAB5C-205ENST00000550013 DEFB128Q7Z7B8 93 aa18.12■□□□□ 0.49
RAB5C-205ENST00000550013 COPS5Q92905 334 aa18.12■□□□□ 0.49
RAB5C-205ENST00000550013 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
RAB5C-205ENST00000550013 THEGQ9P2T0 379 aa18.12■□□□□ 0.49
RAB5C-205ENST00000550013 ZMYM6O95789 1325 aa18.12■□□□□ 0.49
RAB5C-205ENST00000550013 NCOR1O75376 2440 aa18.12■□□□□ 0.49
RAB5C-205ENST00000550013 SUPT20HL2P0C7V6 817 aa18.11■□□□□ 0.49
RAB5C-205ENST00000550013 SNHG28P0DPA3 235 aa18.11■□□□□ 0.49
RAB5C-205ENST00000550013 EDNRBP24530 442 aa18.11■□□□□ 0.49
RAB5C-205ENST00000550013 PPP2R5BQ15173 497 aa18.11■□□□□ 0.49
RAB5C-205ENST00000550013 NBPF20Q3BBV1 942 aa18.11■□□□□ 0.49
RAB5C-205ENST00000550013 FAM47CQ5HY64 1035 aa18.11■□□□□ 0.49
RAB5C-205ENST00000550013 CPVLQ9H3G5 476 aa18.11■□□□□ 0.49
RAB5C-205ENST00000550013 GPHNQ9NQX3 736 aaPredicted RBP18.11■□□□□ 0.49
RAB5C-205ENST00000550013 CCDC171Q6TFL3 1326 aa18.11■□□□□ 0.49
RAB5C-205ENST00000550013 TANC1Q9C0D5 1861 aa18.11■□□□□ 0.49
RAB5C-205ENST00000550013 NEDD4P46934 1319 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 WDR19Q8NEZ3 1342 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 TNFRSF10AO00220 468 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 GOLGA8HP0CJ92 632 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 ATP2A2P16615 1042 aaKnown RBP18.1■□□□□ 0.49
RAB5C-205ENST00000550013 HDAC1Q13547 482 aaPredicted RBP18.1■□□□□ 0.49
RAB5C-205ENST00000550013 USH1GQ495M9 461 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 PPP2R2DQ66LE6 453 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 MFSD6Q6ZSS7 791 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 SCFD2Q8WU76 684 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 ATXN2LQ8WWM7 1075 aaKnown RBP18.1■□□□□ 0.49
RAB5C-205ENST00000550013 TTC14Q96N46 770 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 ASB2Q96Q27 587 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 ZKSCAN3Q9BRR0 538 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 PCDHA11Q9Y5I1 949 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 TET1Q8NFU7 2136 aa18.1■□□□□ 0.49
RAB5C-205ENST00000550013 TRIP12Q14669 1992 aaPredicted RBP18.1■□□□□ 0.49
RAB5C-205ENST00000550013 LAMA4Q16363 1823 aa18.09■□□□□ 0.49
RAB5C-205ENST00000550013 BDP1A6H8Y1 2624 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms