RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 A0A0U1RQG5 324 aaPredicted RBP28.16■■■□□ 2.1
USP44-205ENST00000549639 TRIM43BA6NCK2 446 aa28.16■■■□□ 2.1
USP44-205ENST00000549639 KIAA0355O15063 1070 aa28.16■■■□□ 2.1
USP44-205ENST00000549639 CTAGE5O15320 804 aa28.16■■■□□ 2.1
USP44-205ENST00000549639 DHX16O60231 1041 aaKnown RBP28.16■■■□□ 2.1
USP44-205ENST00000549639 PQBP1O60828 265 aaKnown RBP28.16■■■□□ 2.1
USP44-205ENST00000549639 SMPD1P17405 629 aa28.16■■■□□ 2.1
USP44-205ENST00000549639 KIAA1211Q6ZU35 1233 aa28.16■■■□□ 2.1
USP44-205ENST00000549639 CENPQQ7L2Z9 268 aaPredicted RBP28.16■■■□□ 2.1
USP44-205ENST00000549639 EEPD1Q7L9B9 569 aa28.16■■■□□ 2.1
USP44-205ENST00000549639 MCF2L2Q86YR7 1114 aa28.16■■■□□ 2.1
USP44-205ENST00000549639 TRIM43Q96BQ3 446 aaPredicted RBP28.16■■■□□ 2.1
USP44-205ENST00000549639 PURBQ96QR8 312 aaKnown RBP28.16■■■□□ 2.1
USP44-205ENST00000549639 SEZ6LQ9BYH1 1024 aa28.16■■■□□ 2.1
USP44-205ENST00000549639 CPVLQ9H3G5 476 aa28.16■■■□□ 2.1
USP44-205ENST00000549639 E7EWF7 191 aa28.15■■■□□ 2.1
USP44-205ENST00000549639 SH3RF1Q7Z6J0 888 aa28.15■■■□□ 2.1
USP44-205ENST00000549639 VTI1AQ96AJ9 217 aa28.15■■■□□ 2.1
USP44-205ENST00000549639 LRCH3Q96II8 777 aa28.15■■■□□ 2.1
USP44-205ENST00000549639 JMJD4Q9H9V9 463 aa28.15■■■□□ 2.1
USP44-205ENST00000549639 PDGFCQ9NRA1 345 aa28.15■■■□□ 2.1
USP44-205ENST00000549639 RBM47A0AV96 593 aaKnown RBP28.14■■■□□ 2.1
USP44-205ENST00000549639 IFIT3O14879 490 aaKnown RBP28.14■■■□□ 2.1
USP44-205ENST00000549639 DYNC1LI2O43237 492 aaPredicted RBP28.14■■■□□ 2.1
USP44-205ENST00000549639 CDK7P50613 346 aa28.14■■■□□ 2.1
USP44-205ENST00000549639 PDE4DQ08499 809 aa28.14■■■□□ 2.1
USP44-205ENST00000549639 FSCN1Q16658 493 aaKnown RBP28.14■■■□□ 2.1
USP44-205ENST00000549639 QRICH1Q2TAL8 776 aa28.14■■■□□ 2.1
USP44-205ENST00000549639 DUSP28Q4G0W2 176 aa28.14■■■□□ 2.1
USP44-205ENST00000549639 FBXO11Q86XK2 927 aa28.14■■■□□ 2.1
USP44-205ENST00000549639 BADQ92934 168 aa28.14■■■□□ 2.1
USP44-205ENST00000549639 TMEM39AQ9NV64 488 aa28.14■■■□□ 2.1
USP44-205ENST00000549639 MRPL11Q9Y3B7 192 aaKnown RBP28.14■■■□□ 2.1
USP44-205ENST00000549639 KLRF2D3W0D1 207 aa28.13■■■□□ 2.09
USP44-205ENST00000549639 ARVCFO00192 962 aa28.13■■■□□ 2.09
USP44-205ENST00000549639 EDNRBP24530 442 aa28.13■■■□□ 2.09
USP44-205ENST00000549639 IRX5P78411 483 aaPredicted RBP28.13■■■□□ 2.09
USP44-205ENST00000549639 FAAP100Q0VG06 881 aa28.13■■■□□ 2.09
USP44-205ENST00000549639 RAG1P15918 1043 aa28.12■■■□□ 2.09
USP44-205ENST00000549639 BEX3Q00994 111 aa28.12■■■□□ 2.09
USP44-205ENST00000549639 TRAF1Q13077 416 aa28.12■■■□□ 2.09
USP44-205ENST00000549639 AMNQ9BXJ7 453 aa28.12■■■□□ 2.09
USP44-205ENST00000549639 WDR11Q9BZH6 1224 aa28.12■■■□□ 2.09
USP44-205ENST00000549639 RBM8AQ9Y5S9 174 aaKnown RBP28.12■■■□□ 2.09
USP44-205ENST00000549639 DDX49Q9Y6V7 483 aaKnown RBP28.12■■■□□ 2.09
USP44-205ENST00000549639 PALM3A6NDB9 673 aaPredicted RBP28.11■■■□□ 2.09
USP44-205ENST00000549639 NKRFO15226 690 aaKnown RBP eCLIP28.11■■■□□ 2.09
USP44-205ENST00000549639 WTAPQ15007 396 aa28.11■■■□□ 2.09
USP44-205ENST00000549639 STAG2Q8N3U4 1231 aa28.11■■■□□ 2.09
USP44-205ENST00000549639 MTA3Q9BTC8 594 aa28.11■■■□□ 2.09
USP44-205ENST00000549639 VAT1LQ9HCJ6 419 aa28.11■■■□□ 2.09
USP44-205ENST00000549639 MAD2L2Q9UI95 211 aa28.11■■■□□ 2.09
USP44-205ENST00000549639 TLR3O15455 904 aaKnown RBP28.1■■■□□ 2.09
USP44-205ENST00000549639 SCFD2Q8WU76 684 aa28.1■■■□□ 2.09
USP44-205ENST00000549639 MTMR8Q96EF0 704 aa28.1■■■□□ 2.09
USP44-205ENST00000549639 GRM4Q14833 912 aa28.09■■■□□ 2.09
USP44-205ENST00000549639 BMP2KLQ5H9B9 411 aa28.09■■■□□ 2.09
USP44-205ENST00000549639 CXCL17Q6UXB2 119 aa28.09■■■□□ 2.09
USP44-205ENST00000549639 SAMD3Q8N6K7 520 aa28.09■■■□□ 2.09
USP44-205ENST00000549639 NSUN6Q8TEA1 469 aaKnown RBP28.09■■■□□ 2.09
USP44-205ENST00000549639 MAP3K20Q9NYL2 800 aaKnown RBP28.09■■■□□ 2.09
USP44-205ENST00000549639 ZBTB5O15062 677 aa28.08■■■□□ 2.09
USP44-205ENST00000549639 CPT1AP50416 773 aa28.08■■■□□ 2.09
USP44-205ENST00000549639 BRDTQ58F21 947 aaPredicted RBP28.08■■■□□ 2.09
USP44-205ENST00000549639 STOX1Q6ZVD7 989 aa28.08■■■□□ 2.09
USP44-205ENST00000549639 SLC43A3Q8NBI5 491 aa28.08■■■□□ 2.09
USP44-205ENST00000549639 SYTL5Q8TDW5 730 aaPredicted RBP28.08■■■□□ 2.09
USP44-205ENST00000549639 IWS1Q96ST2 819 aa28.08■■■□□ 2.09
USP44-205ENST00000549639 ESYT1Q9BSJ8 1104 aa28.08■■■□□ 2.09
USP44-205ENST00000549639 TBX21Q9UL17 535 aa28.08■■■□□ 2.09
USP44-205ENST00000549639 MYH6P13533 1939 aa28.08■■■□□ 2.09
USP44-205ENST00000549639 TIMP1P01033 207 aa28.07■■■□□ 2.08
USP44-205ENST00000549639 TROAPQ12815 778 aa28.07■■■□□ 2.08
USP44-205ENST00000549639 PPP2R5BQ15173 497 aa28.07■■■□□ 2.08
USP44-205ENST00000549639 TMEM67Q5HYA8 995 aa28.07■■■□□ 2.08
USP44-205ENST00000549639 CATIPQ7Z7H3 387 aa28.07■■■□□ 2.08
USP44-205ENST00000549639 FAM126BQ8IXS8 530 aa28.07■■■□□ 2.08
USP44-205ENST00000549639 MB21D2Q8IYB1 491 aaPredicted RBP28.07■■■□□ 2.08
USP44-205ENST00000549639 LSG1Q9H089 658 aaKnown RBP28.07■■■□□ 2.08
USP44-205ENST00000549639 POLR3EQ9NVU0 708 aa28.07■■■□□ 2.08
USP44-205ENST00000549639 TAF6LQ9Y6J9 622 aa28.07■■■□□ 2.08
USP44-205ENST00000549639 ITGB8P26012 769 aa28.06■■■□□ 2.08
USP44-205ENST00000549639 GHRHRQ02643 423 aa28.06■■■□□ 2.08
USP44-205ENST00000549639 FPGSQ05932 587 aa28.06■■■□□ 2.08
USP44-205ENST00000549639 IGDCC4Q8TDY8 1250 aa28.06■■■□□ 2.08
USP44-205ENST00000549639 MAP3K14Q99558 947 aa28.06■■■□□ 2.08
USP44-205ENST00000549639 RIOX1Q9H6W3 641 aa28.06■■■□□ 2.08
USP44-205ENST00000549639 ITGA7Q13683 1181 aa28.05■■■□□ 2.08
USP44-205ENST00000549639 TTLL4Q14679 1199 aa28.05■■■□□ 2.08
USP44-205ENST00000549639 SHHQ15465 462 aa28.05■■■□□ 2.08
USP44-205ENST00000549639 TMEM63BQ5T3F8 832 aa28.05■■■□□ 2.08
USP44-205ENST00000549639 TBC1D5Q92609 795 aa28.05■■■□□ 2.08
USP44-205ENST00000549639 RMDN3Q96TC7 470 aa28.05■■■□□ 2.08
USP44-205ENST00000549639 ANTXR2P58335 489 aa28.04■■■□□ 2.08
USP44-205ENST00000549639 STXBP2Q15833 593 aa28.04■■■□□ 2.08
USP44-205ENST00000549639 CASC1Q6TDU7 716 aa28.04■■■□□ 2.08
USP44-205ENST00000549639 CHST3Q7LGC8 479 aa28.04■■■□□ 2.08
USP44-205ENST00000549639 TMTC2Q8N394 836 aa28.04■■■□□ 2.08
USP44-205ENST00000549639 OR6J1Q8NGC5 347 aa28.04■■■□□ 2.08
USP44-205ENST00000549639 TAAR1Q96RJ0 339 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms