RNA–Protein interactions for RNA: ENST00000549022.5

PFKM-215, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-215	ENST00000549022	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.15	□□□□□ -0.3
PFKM-215	ENST00000549022	AMN	Q9BXJ7	453 aa		13.15	□□□□□ -0.3
PFKM-215	ENST00000549022	C22orf23	Q9BZE7	217 aa		13.15	□□□□□ -0.3
PFKM-215	ENST00000549022	DIS3	Q9Y2L1	958 aa	Known RBP	13.15	□□□□□ -0.3
PFKM-215	ENST00000549022	PLXNB2	O15031	1838 aa		13.15	□□□□□ -0.3
PFKM-215	ENST00000549022	EYS	Q5T1H1	3165 aa		13.15	□□□□□ -0.3
PFKM-215	ENST00000549022	ABCB11	O95342	1321 aa		13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	PNMA6F	A0A0J9YX94	578 aa		13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	CYTH3	O43739	400 aa		13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	PLEKHA8P1	O95397	391 aa		13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	RBM25	P49756	843 aa	Known RBP	13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	METAP2	P50579	478 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	TOB2	Q14106	344 aa	Predicted RBP	13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	USH1G	Q495M9	461 aa		13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	TMTC3	Q6ZXV5	915 aa		13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	HOMER1	Q86YM7	354 aa		13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	SRBD1	Q8N5C6	995 aa	Known RBP	13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	RRP36	Q96EU6	259 aa	Known RBP	13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	MAF1	Q9H063	256 aa		13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	SEC63	Q9UGP8	760 aa	Known RBP	13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	TTC28	Q96AY4	2481 aa		13.14	□□□□□ -0.31
PFKM-215	ENST00000549022	CDH23	Q9H251	3354 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	NID2	Q14112	1375 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	DNAJC25-GNG10	A0A024R161	153 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	COBL	O75128	1261 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	PGK2	P07205	417 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	CACNB2	Q08289	660 aa	Predicted RBP	13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	SLC35G1	Q2M3R5	365 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	MUM1L1	Q5H9M0	696 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	MFSD14C	Q5VZR4	134 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	OLFML2B	Q68BL8	750 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	LHX8	Q68G74	356 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	NPLOC4	Q8TAT6	608 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	ZNF274	Q96GC6	653 aa	Predicted RBP	13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	FAM161B	Q96MY7	647 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	PIGS	Q96S52	555 aa		13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	A1CF	Q9NQ94	594 aa	Known RBP	13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	MRPL11	Q9Y3B7	192 aa	Known RBP	13.13	□□□□□ -0.31
PFKM-215	ENST00000549022	NFIB	O00712	420 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	PDIA3	P30101	505 aa	Known RBP	13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	NEK4	P51957	841 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	CCL14	Q16627	93 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	ZNF792	Q3KQV3	632 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	NSMF	Q6X4W1	530 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	MCF2L2	Q86YR7	1114 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	RGS22	Q8NE09	1264 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	MAFA	Q8NHW3	353 aa	Predicted RBP	13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	CLEC4D	Q8WXI8	215 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	SYMPK	Q92797	1274 aa	Known RBP	13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	MAML3	Q96JK9	1138 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	BACH2	Q9BYV9	841 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	CYP39A1	Q9NYL5	469 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	PCDHA1	Q9Y5I3	950 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	MUC3A	Q02505	3323 aa		13.12	□□□□□ -0.31
PFKM-215	ENST00000549022	PPP1R11	O60927	126 aa	Predicted RBP	13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	TAL1	P17542	331 aa	Predicted RBP	13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	CDC27	P30260	824 aa		13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	RNF207	Q6ZRF8	634 aa		13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	CMTR1	Q8N1G2	835 aa	Known RBP	13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	CCDC82	Q8N4S0	544 aa		13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	MSL3	Q8N5Y2	521 aa	Known RBP	13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	IL27	Q8NEV9	243 aa		13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	PIBF1	Q8WXW3	757 aa		13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	CDX2	Q99626	313 aa	Predicted RBP	13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	PRKAG2	Q9UGJ0	569 aa		13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	CNTNAP5	Q8WYK1	1306 aa		13.11	□□□□□ -0.31
PFKM-215	ENST00000549022	PTPDC1	A2A3K4	754 aa		13.1	□□□□□ -0.31
PFKM-215	ENST00000549022	MSC	O60682	206 aa		13.1	□□□□□ -0.31
PFKM-215	ENST00000549022	CCND3	P30281	292 aa	Predicted RBP	13.1	□□□□□ -0.31
PFKM-215	ENST00000549022	ADD1	P35611	737 aa	Known RBP	13.1	□□□□□ -0.31
PFKM-215	ENST00000549022	AK2	P54819	239 aa		13.1	□□□□□ -0.31
PFKM-215	ENST00000549022	BAAT	Q14032	418 aa	Predicted RBP	13.1	□□□□□ -0.31
PFKM-215	ENST00000549022	SAMD3	Q8N6K7	520 aa		13.1	□□□□□ -0.31
PFKM-215	ENST00000549022	FAM133A	Q8N9E0	248 aa		13.1	□□□□□ -0.31
PFKM-215	ENST00000549022	FLRT1	Q9NZU1	646 aa		13.1	□□□□□ -0.31
PFKM-215	ENST00000549022	ADD3	Q9UEY8	706 aa	Known RBP	13.1	□□□□□ -0.31
PFKM-215	ENST00000549022	PRUNE2	Q8WUY3	3088 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	CPLX1	O14810	134 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	IGHA2	P01877	340 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	RPS6	P62753	249 aa	Known RBP	13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	CCT2	P78371	535 aa	Known RBP	13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	CNTN2	Q02246	1040 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	FUT2	Q10981	343 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	CPLX2	Q6PUV4	134 aa	Known RBP	13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	MAMDC4	Q6UXC1	1216 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	SLC30A10	Q6XR72	485 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	TBC1D32	Q96NH3	1257 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	KIF2C	Q99661	725 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	LARP6	Q9BRS8	491 aa	Known RBP	13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	TINF2	Q9BSI4	451 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	SLK	Q9H2G2	1235 aa	Predicted RBP	13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	SEMA6B	Q9H3T3	888 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	MAP3K20	Q9NYL2	800 aa	Known RBP	13.09	□□□□□ -0.31
PFKM-215	ENST00000549022		V9GY48	417 aa	Predicted RBP	13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	SYNGAP1	Q96PV0	1343 aa		13.09	□□□□□ -0.31
PFKM-215	ENST00000549022	MYH6	P13533	1939 aa		13.08	□□□□□ -0.32

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