RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TCP1P17987 556 aaKnown RBP11□□□□□ -0.65
SMARCD1-205ENST00000548573 SIK1P57059 783 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 CYP27A1Q02318 531 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 C2orf54Q08AI8 447 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 SF3B2Q13435 895 aaKnown RBP11□□□□□ -0.65
SMARCD1-205ENST00000548573 ERFEQ4G0M1 354 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 DNAJC21Q5F1R6 531 aaKnown RBP11□□□□□ -0.65
SMARCD1-205ENST00000548573 C12orf60Q5U649 245 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 RIN2Q8WYP3 895 aaPredicted RBP11□□□□□ -0.65
SMARCD1-205ENST00000548573 PLIN2Q99541 437 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 LZTS2Q9BRK4 669 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 LRWD1Q9UFC0 647 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 PCDHA13Q9Y5I0 950 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 BAZ2BQ9UIF8 2168 aaKnown RBP11□□□□□ -0.65
SMARCD1-205ENST00000548573 GOLGA6CA6NDK9 693 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 VGLL3A8MV65 326 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 CYTH3O43739 400 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 GOLGA6DP0CG33 693 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 HOXA7P31268 230 aaPredicted RBP10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 HIBADHP31937 336 aaKnown RBP10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 ASIC1P78348 528 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 TXNRD1Q16881 649 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 CCDC96Q2M329 555 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 VWA3BQ502W6 1294 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 CENPPQ6IPU0 288 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 GBP6Q6ZN66 633 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 C3orf67Q6ZVT6 689 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 KRT25Q7Z3Z0 450 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 HEATR3Q7Z4Q2 680 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 PPM1EQ8WY54 764 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 SH3GL2Q99962 352 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 IFIH1Q9BYX4 1025 aaKnown RBP10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 FAM107BQ9H098 131 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 ZMYND12Q9H0C1 365 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 MCM9Q9NXL9 1143 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 GOLGA6AQ9NYA3 693 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 ARHGAP20Q9P2F6 1191 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 ROBO3Q96MS0 1386 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 CCDC88AQ3V6T2 1871 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 KAT6BQ8WYB5 2073 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 KDM4FA0A1W2PPD8 638 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 PALM3A6NDB9 673 aaPredicted RBP10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 GOLGA8KD6RF30 607 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 FGFR1OPO95684 399 aaKnown RBP10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 TNFRSF8P28908 595 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 PRDX5P30044 214 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 KIF11P52732 1056 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 PPFIA1Q13136 1202 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 ORC2Q13416 577 aaPredicted RBP10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 ITPK1Q13572 414 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 SLC35G1Q2M3R5 365 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 CCDC84Q86UT8 332 aaPredicted RBP10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 EFCAB13Q8IY85 973 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 GSPT2Q8IYD1 628 aaKnown RBP10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 CCDC155Q8N6L0 562 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 SPATA4Q8NEY3 305 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 GDAP1L1Q96MZ0 367 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 ALS2CR12Q96Q35 445 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 SIK3Q9Y2K2 1263 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 HYOU1Q9Y4L1 999 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 CAPN6Q9Y6Q1 641 aa10.99□□□□□ -0.65
SMARCD1-205ENST00000548573 MYH14Q7Z406 1995 aaKnown RBP10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 PJA2O43164 708 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 OPA1O60313 960 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 USP17L8P0C7I0 530 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 FCER1AP12319 257 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 NOP2P46087 812 aaKnown RBP10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 SLC10A5Q5PT55 438 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 EMBQ6PCB8 327 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 KRT26Q7Z3Y9 468 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 KIAA0895Q8NCT3 520 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 CELF1Q92879 486 aaKnown RBP10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 OSBPL9Q96SU4 736 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 LRRC1Q9BTT6 524 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 NDST4Q9H3R1 872 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 SEMA6BQ9H3T3 888 aa10.98□□□□□ -0.65
SMARCD1-205ENST00000548573 PVALEFA0A1B0GWK0 134 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 A6NNZ2 444 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 CPP00450 1065 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 PLEKP08567 350 aaPredicted RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 EPB41P11171 864 aaKnown RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 EPHB4P54760 987 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 NONOQ15233 471 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 MAN2A1Q16706 1144 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 TUBB8Q3ZCM7 444 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 TTC31Q49AM3 519 aaPredicted RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 ALS2CLQ60I27 953 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 SPTY2D1Q68D10 685 aaPredicted RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 ARHGAP27Q6ZUM4 889 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 SND1Q7KZF4 910 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 C2CD5Q86YS7 1000 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 EEF2KMTQ96G04 330 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 CALML4Q96GE6 196 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 ZFP91Q96JP5 570 aaPredicted RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 CDCA7Q9BWT1 371 aaPredicted RBP10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 SPZ1Q9BXG8 430 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 EDEM3Q9BZQ6 932 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 ANKRD2Q9GZV1 360 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 DEF6Q9H4E7 631 aa10.97□□□□□ -0.65
SMARCD1-205ENST00000548573 ROBO1Q9Y6N7 1651 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms