RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 DNAJC7Q99615 494 aa6.32□□□□□ -1.4
DEPDC4-205ENST00000548313 AARSD1Q9BTE6 412 aaKnown RBP6.32□□□□□ -1.4
DEPDC4-205ENST00000548313 LGR4Q9BXB1 951 aa6.32□□□□□ -1.4
DEPDC4-205ENST00000548313 KDM2BQ8NHM5 1336 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 USP2O75604 605 aaPredicted RBP6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 SNRPB2P08579 225 aaKnown RBP6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 CEBPAP49715 358 aaPredicted RBP6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 GFRA1P56159 465 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 ERVFC1P60507 584 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 MAP4K2Q12851 820 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 BMS1Q14692 1282 aaKnown RBP6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 TMEM67Q5HYA8 995 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 E4F1Q66K89 784 aaPredicted RBP6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 JAMLQ86YT9 394 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 JMYQ8N9B5 988 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 NLGN2Q8NFZ4 835 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 KCTD13Q8WZ19 329 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 MMP19Q99542 508 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 ARHGEF4Q9NR80 690 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 PFDN2Q9UHV9 154 aa6.31□□□□□ -1.4
DEPDC4-205ENST00000548313 NPHP3-ACAD11A0A0J9YXS1 232 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 NOTOA8MTQ0 251 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 ADCY3O60266 1144 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 THBDP07204 575 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 L1CAMP32004 1257 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 KCNJ6P48051 423 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 CORO7P57737 925 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 TESK1Q15569 626 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 ACBD5Q5T8D3 534 aaPredicted RBP6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 FYB2Q5VWT5 728 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 PRR23BQ6ZRT6 265 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 AMIGO3Q86WK7 504 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 SCUBE1Q8IWY4 988 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 FRS2Q8WU20 508 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 SLC26A8Q96RN1 970 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 IER2Q9BTL4 223 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 CRTAC1Q9NQ79 661 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 GPRC5CQ9NQ84 441 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 TAF6LQ9Y6J9 622 aa6.3□□□□□ -1.4
DEPDC4-205ENST00000548313 DIAPH1O60610 1272 aaKnown RBP6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 C1QTNF9P0C862 333 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 PABPC1P11940 636 aaKnown RBP6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 PLS3P13797 630 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 ECI1P42126 302 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 GRIA2P42262 883 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 CYP4F3Q08477 520 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 HSF5Q4G112 596 aaPredicted RBP6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 SLC35F1Q5T1Q4 408 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 NSMFQ6X4W1 530 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 NLRX1Q86UT6 975 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 FBXO15Q8NCQ5 510 aaPredicted RBP6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 KREMEN2Q8NCW0 462 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 NPLOC4Q8TAT6 608 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 THAP3Q8WTV1 239 aaPredicted RBP6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 IPO9Q96P70 1041 aaKnown RBP6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 JMJD8Q96S16 334 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 C19orf44Q9H6X5 657 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 ACSL6Q9UKU0 697 aa6.29□□□□□ -1.4
DEPDC4-205ENST00000548313 CCDC163A0A0D9SF12 145 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 A0A1W2PQ27 194 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 A0A1W2PQ64 194 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 A0A1W2PQC6 194 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 A0A1W2PQD8 194 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 PRODHO43272 600 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 DLX3O60479 287 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 PSPNO60542 156 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 PNLIPP16233 465 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 TRHRP34981 398 aaPredicted RBP6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 KCNAB2Q13303 367 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 LAPTM5Q13571 262 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 SF1Q15637 639 aaKnown RBP6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 TIGD5Q53EQ6 642 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 NOP9Q86U38 636 aaKnown RBP6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 TMEM145Q8NBT3 493 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 OSBP2Q969R2 916 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 SHISA4Q96DD7 197 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 CDC6Q99741 560 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 CLEC1BQ9P126 229 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 GPR160Q9UJ42 338 aa6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 YBX2Q9Y2T7 364 aaKnown RBP6.28□□□□□ -1.4
DEPDC4-205ENST00000548313 MEFVO15553 781 aaPredicted RBP6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 KRT1P04264 644 aa6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 FAM153BP0C7A2 387 aa6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 TMEM253P0C7T8 217 aa6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 ARL4AP40617 200 aa6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 BUD31P41223 144 aaPredicted RBP6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 C2orf27AQ580R0 203 aa6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 LILRB2Q8N423 598 aa6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 ZSWIM2Q8NEG5 633 aa6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 C1orf159Q96HA4 380 aa6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 RNF32Q9H0A6 362 aa6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 PIF1Q9H611 641 aa6.27□□□□□ -1.41
DEPDC4-205ENST00000548313 TRBV23-1A0A0A0MS06 115 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 NPHS1O60500 1241 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 PRKCAP17252 672 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 LTBRP36941 435 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 CYP4F8P98187 520 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 RSPO2Q6UXX9 243 aaPredicted RBP6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 CPNE8Q86YQ8 564 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 PPIL6Q8IXY8 311 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms