RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 FAM133AQ8N9E0 248 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 TRIB2Q92519 343 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 ARMC5Q96C12 935 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 MAML3Q96JK9 1138 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 STK36Q9NRP7 1315 aa13.13□□□□□ -0.31
CALCOCO1-208ENST00000547988 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 hCG_1642624A0A1W2PR95 340 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 OPLAHO14841 1288 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 IGHA2P01877 340 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 SCG2P13521 617 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 HSD17B4P51659 736 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 RPS6P62753 249 aaKnown RBP13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 CCL14Q16627 93 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 MAMDC4Q6UXC1 1216 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 SLC30A10Q6XR72 485 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 TEX2Q8IWB9 1127 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 PHKBQ93100 1093 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 SLC26A6Q9BXS9 759 aa13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 ADD3Q9UEY8 706 aaKnown RBP13.12□□□□□ -0.31
CALCOCO1-208ENST00000547988 DEXIO95424 95 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 CFBP00751 764 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 INHAP05111 366 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 CALML3P27482 149 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 UBXN2AP68543 259 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 CNTN2Q02246 1040 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 PKN1Q16512 942 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 MFSD14CQ5VZR4 134 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 WWC2Q6AWC2 1192 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 TNS4Q8IZW8 715 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 NECAB1Q8N987 351 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 DNERQ8NFT8 737 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 SH3TC2Q8TF17 1288 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 CCDC12Q8WUD4 166 aaPredicted RBP13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 FGD4Q96M96 766 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 TINF2Q9BSI4 451 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 FLRT1Q9NZU1 646 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 BIN2Q9UBW5 565 aaPredicted RBP13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 SYNGAP1Q96PV0 1343 aa13.11□□□□□ -0.31
CALCOCO1-208ENST00000547988 DOCK5Q9H7D0 1870 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 SOWAHBA6NEL2 793 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 ASB14A6NK59 587 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 GCOM1H8Y6P7 765 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 STXBP3O00186 592 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 PIK3CDO00329 1044 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 POLR2MP0CAP2 368 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 NAPAP54920 295 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 MAP3K21Q5TCX8 1036 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 FAM177A1Q8N128 213 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 CUL5Q93034 780 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 ZNF333Q96JL9 665 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 MPHOSPH6Q99547 160 aaKnown RBP13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 GLT8D2Q9H1C3 349 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 NRBP1Q9UHY1 535 aa13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 KIAA0100Q14667 2235 aaKnown RBP13.1□□□□□ -0.31
CALCOCO1-208ENST00000547988 ESYT2A0FGR8 921 aa13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 B4DLN1 442 aa13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 CD2BP2O95400 341 aaKnown RBP13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 CTDNEP1O95476 244 aa13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 ALDH5A1P51649 535 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 MRPL12P52815 198 aaKnown RBP13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 NSUN7Q8NE18 718 aaKnown RBP13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 CCDC148Q8NFR7 591 aa13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 SYTL5Q8TDW5 730 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 ABHD8Q96I13 439 aa13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 LLPHQ9BRT6 129 aaKnown RBP13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 PSTPIP2Q9H939 334 aa13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 SH3GLB2Q9NR46 395 aa13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 ASTN1O14525 1302 aa13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 RPTORQ8N122 1335 aa13.09□□□□□ -0.31
CALCOCO1-208ENST00000547988 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 CYP2C19P33261 490 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 ADCY7P51828 1080 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 CACNB2Q08289 660 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 ST3GAL1Q11201 340 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 ARMCX2Q7L311 632 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 CCDC83Q8IWF9 413 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 SMARCC2Q8TAQ2 1214 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 MORC4Q8TE76 937 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 NSUN6Q8TEA1 469 aaKnown RBP13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 WASF1Q92558 559 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 TMX3Q96JJ7 454 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 RIC8AQ9NPQ8 531 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 COL20A1Q9P218 1284 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 ORC3Q9UBD5 711 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 BRCA2P51587 3418 aa13.08□□□□□ -0.32
CALCOCO1-208ENST00000547988 WDR81Q562E7 1941 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 MEIS2O14770 477 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 CYBAP13498 195 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 XBP1P17861 261 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 GNA11P29992 359 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 HOXA13P31271 388 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms