RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 FBXO16Q8IX29 292 aaPredicted RBP16.07■□□□□ 0.16
CCDC59-202ENST00000547758 GMCL1P1Q8NEA9 526 aa16.07■□□□□ 0.16
CCDC59-202ENST00000547758 CEP95Q96GE4 821 aa16.07■□□□□ 0.16
CCDC59-202ENST00000547758 PDGFCQ9NRA1 345 aa16.07■□□□□ 0.16
CCDC59-202ENST00000547758 RNF146Q9NTX7 359 aa16.07■□□□□ 0.16
CCDC59-202ENST00000547758 Q9Y3F1 56 aa16.07■□□□□ 0.16
CCDC59-202ENST00000547758 TTLL1O95922 423 aa16.06■□□□□ 0.16
CCDC59-202ENST00000547758 BMP3P12645 472 aa16.06■□□□□ 0.16
CCDC59-202ENST00000547758 IER5LQ5T953 404 aa16.06■□□□□ 0.16
CCDC59-202ENST00000547758 IQSEC1Q6DN90 963 aa16.06■□□□□ 0.16
CCDC59-202ENST00000547758 TAPT1Q6NXT6 567 aa16.06■□□□□ 0.16
CCDC59-202ENST00000547758 GIMAP6Q6P9H5 292 aa16.06■□□□□ 0.16
CCDC59-202ENST00000547758 EEPD1Q7L9B9 569 aa16.06■□□□□ 0.16
CCDC59-202ENST00000547758 RPAP2Q8IXW5 612 aaPredicted RBP16.06■□□□□ 0.16
CCDC59-202ENST00000547758 STRBPQ96SI9 672 aaKnown RBP16.06■□□□□ 0.16
CCDC59-202ENST00000547758 SLC9A7Q96T83 725 aa16.06■□□□□ 0.16
CCDC59-202ENST00000547758 TRMT13Q9NUP7 481 aaKnown RBP16.06■□□□□ 0.16
CCDC59-202ENST00000547758 MTMR4Q9NYA4 1195 aa16.06■□□□□ 0.16
CCDC59-202ENST00000547758 DDX49Q9Y6V7 483 aaKnown RBP16.06■□□□□ 0.16
CCDC59-202ENST00000547758 ZNF536O15090 1300 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 TNKSO95271 1327 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 GSG1L2A8MUP6 293 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 RAB11FIP3O75154 756 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 HMMRO75330 724 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 SUPT20HL2P0C7V6 817 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 CYP2C9P11712 490 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 ACTN1P12814 892 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 STAT2P52630 851 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 TKFCQ3LXA3 575 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 TMEM63BQ5T3F8 832 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 SLFN13Q68D06 897 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 ZNF444Q8N0Y2 327 aaPredicted RBP16.05■□□□□ 0.16
CCDC59-202ENST00000547758 PANK1Q8TE04 598 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 ARNTL2Q8WYA1 636 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 HLA-CQ95604 372 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 TRERF1Q96PN7 1200 aa16.05■□□□□ 0.16
CCDC59-202ENST00000547758 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
CCDC59-202ENST00000547758 PLIN4Q96Q06 1357 aa16.04■□□□□ 0.16
CCDC59-202ENST00000547758 TMEM232C9JQI7 657 aa16.04■□□□□ 0.16
CCDC59-202ENST00000547758 CCER2I3L3R5 266 aa16.04■□□□□ 0.16
CCDC59-202ENST00000547758 GPR37L1O60883 481 aa16.04■□□□□ 0.16
CCDC59-202ENST00000547758 PRDM1O75626 825 aa16.04■□□□□ 0.16
CCDC59-202ENST00000547758 TAP1Q03518 808 aa16.04■□□□□ 0.16
CCDC59-202ENST00000547758 PHOSPHO2Q8TCD6 241 aa16.04■□□□□ 0.16
CCDC59-202ENST00000547758 KHSRPQ92945 711 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC59-202ENST00000547758 ZNF287Q9HBT7 754 aa16.04■□□□□ 0.16
CCDC59-202ENST00000547758 VTA1Q9NP79 307 aa16.04■□□□□ 0.16
CCDC59-202ENST00000547758 C11orf16Q9NQ32 467 aa16.04■□□□□ 0.16
CCDC59-202ENST00000547758 SIP14410 1827 aa16.03■□□□□ 0.16
CCDC59-202ENST00000547758 ARHGEF15O94989 841 aa16.03■□□□□ 0.16
CCDC59-202ENST00000547758 ALAS1P13196 640 aa16.03■□□□□ 0.16
CCDC59-202ENST00000547758 RFC2P35250 354 aa16.03■□□□□ 0.16
CCDC59-202ENST00000547758 IKQ13123 557 aaPredicted RBP16.03■□□□□ 0.16
CCDC59-202ENST00000547758 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
CCDC59-202ENST00000547758 FAM160B2Q86V87 743 aa16.03■□□□□ 0.16
CCDC59-202ENST00000547758 CHURC1Q8WUH1 139 aa16.03■□□□□ 0.16
CCDC59-202ENST00000547758 EPB41L4AQ9HCS5 686 aaPredicted RBP16.03■□□□□ 0.16
CCDC59-202ENST00000547758 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
CCDC59-202ENST00000547758 CYP39A1Q9NYL5 469 aa16.03■□□□□ 0.16
CCDC59-202ENST00000547758 FAM86C2PA6NEL3 165 aa16.02■□□□□ 0.16
CCDC59-202ENST00000547758 KIF28PB7ZC32 967 aa16.02■□□□□ 0.16
CCDC59-202ENST00000547758 PYGBP11216 843 aa16.02■□□□□ 0.16
CCDC59-202ENST00000547758 TDO2P48775 406 aa16.02■□□□□ 0.16
CCDC59-202ENST00000547758 PURAQ00577 322 aaKnown RBP16.02■□□□□ 0.16
CCDC59-202ENST00000547758 GRB10Q13322 594 aa16.02■□□□□ 0.16
CCDC59-202ENST00000547758 DUSP28Q4G0W2 176 aa16.02■□□□□ 0.16
CCDC59-202ENST00000547758 HERC6Q8IVU3 1022 aa16.02■□□□□ 0.16
CCDC59-202ENST00000547758 SIRT2Q8IXJ6 389 aa16.02■□□□□ 0.16
CCDC59-202ENST00000547758 STAG1Q8WVM7 1258 aa16.02■□□□□ 0.16
CCDC59-202ENST00000547758 TSPY3P0CV98 308 aa16.01■□□□□ 0.15
CCDC59-202ENST00000547758 TSPY8P0CW00 308 aa16.01■□□□□ 0.15
CCDC59-202ENST00000547758 SLC1A4P43007 532 aa16.01■□□□□ 0.15
CCDC59-202ENST00000547758 CPT1AP50416 773 aa16.01■□□□□ 0.15
CCDC59-202ENST00000547758 MUM1L1Q5H9M0 696 aa16.01■□□□□ 0.15
CCDC59-202ENST00000547758 MORC4Q8TE76 937 aa16.01■□□□□ 0.15
CCDC59-202ENST00000547758 OSBP2Q969R2 916 aa16.01■□□□□ 0.15
CCDC59-202ENST00000547758 GMCL1Q96IK5 515 aa16.01■□□□□ 0.15
CCDC59-202ENST00000547758 LPXNO60711 386 aa16■□□□□ 0.15
CCDC59-202ENST00000547758 MYL3P08590 195 aa16■□□□□ 0.15
CCDC59-202ENST00000547758 IQCF3P0C7M6 154 aa16■□□□□ 0.15
CCDC59-202ENST00000547758 FAM47CQ5HY64 1035 aa16■□□□□ 0.15
CCDC59-202ENST00000547758 NSMFQ6X4W1 530 aa16■□□□□ 0.15
CCDC59-202ENST00000547758 NEDD1Q8NHV4 660 aa16■□□□□ 0.15
CCDC59-202ENST00000547758 APPBP2Q92624 585 aa16■□□□□ 0.15
CCDC59-202ENST00000547758 CHMP4CQ96CF2 233 aa16■□□□□ 0.15
CCDC59-202ENST00000547758 PURBQ96QR8 312 aaKnown RBP16■□□□□ 0.15
CCDC59-202ENST00000547758 MTG1Q9BT17 334 aaPredicted RBP16■□□□□ 0.15
CCDC59-202ENST00000547758 WDR11Q9BZH6 1224 aa16■□□□□ 0.15
CCDC59-202ENST00000547758 FTOQ9C0B1 505 aaKnown RBP eCLIP16■□□□□ 0.15
CCDC59-202ENST00000547758 PI4K2BG5E9Z4 385 aa15.99■□□□□ 0.15
CCDC59-202ENST00000547758 GPAA1O43292 621 aa15.99■□□□□ 0.15
CCDC59-202ENST00000547758 PLA2G6O60733 806 aa15.99■□□□□ 0.15
CCDC59-202ENST00000547758 BAIAP3O94812 1187 aa15.99■□□□□ 0.15
CCDC59-202ENST00000547758 GNAT2P19087 354 aa15.99■□□□□ 0.15
CCDC59-202ENST00000547758 MCCP23508 829 aa15.99■□□□□ 0.15
CCDC59-202ENST00000547758 SNAP25P60880 206 aa15.99■□□□□ 0.15
CCDC59-202ENST00000547758 NBPF20Q3BBV1 942 aa15.99■□□□□ 0.15
CCDC59-202ENST00000547758 LCE2DQ5TA82 110 aaPredicted RBP15.99■□□□□ 0.15
CCDC59-202ENST00000547758 SPRED2Q7Z698 418 aa15.99■□□□□ 0.15
CCDC59-202ENST00000547758 RETREG2Q8NC44 543 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms