RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 IKBKBO14920 756 aa15.18■□□□□ 0.02
PTCH1-215ENST00000547672 ACTN4O43707 911 aaKnown RBP15.18■□□□□ 0.02
PTCH1-215ENST00000547672 STAT6P42226 847 aa15.18■□□□□ 0.02
PTCH1-215ENST00000547672 DHX8Q14562 1220 aaKnown RBP15.18■□□□□ 0.02
PTCH1-215ENST00000547672 KCTD17Q8N5Z5 321 aa15.18■□□□□ 0.02
PTCH1-215ENST00000547672 MTMR9Q96QG7 549 aa15.18■□□□□ 0.02
PTCH1-215ENST00000547672 WRNIP1Q96S55 665 aa15.18■□□□□ 0.02
PTCH1-215ENST00000547672 ANO3Q9BYT9 981 aa15.18■□□□□ 0.02
PTCH1-215ENST00000547672 TMEM260Q9NX78 707 aa15.18■□□□□ 0.02
PTCH1-215ENST00000547672 TMOD4Q9NZQ9 345 aa15.18■□□□□ 0.02
PTCH1-215ENST00000547672 PCDHA5Q9Y5H7 936 aa15.18■□□□□ 0.02
PTCH1-215ENST00000547672 IQCA1LA6NCM1 817 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 MEIS2O14770 477 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 GTPBP6O43824 516 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-215ENST00000547672 DDNO94850 711 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-215ENST00000547672 ICAM1P05362 532 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 CYP3A4P08684 503 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 SARSP49591 514 aaKnown RBP15.17■□□□□ 0.02
PTCH1-215ENST00000547672 BACE1P56817 501 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 GRIN1Q05586 938 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 USH1GQ495M9 461 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 KRT79Q5XKE5 535 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-215ENST00000547672 SH3RF1Q7Z6J0 888 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 CABP7Q86V35 215 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 SPATA20Q8TB22 786 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 TRPM4Q8TD43 1214 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 KLRG1Q96E93 195 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 PAGE5Q96GU1 130 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 CDK5RAP3Q96JB5 506 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-215ENST00000547672 FAM20AQ96MK3 541 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 DISC1Q9NRI5 854 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 LRWD1Q9UFC0 647 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 PCDHA12Q9UN75 941 aa15.17■□□□□ 0.02
PTCH1-215ENST00000547672 ADCY5O95622 1261 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 PTMAP06454 111 aaKnown RBP15.16■□□□□ 0.02
PTCH1-215ENST00000547672 PTPRAP18433 802 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 ZNF76P36508 570 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 SREBF1P36956 1147 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 PPP1R2P41236 205 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 TXKP42681 527 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 IREB2P48200 963 aaKnown RBP15.16■□□□□ 0.02
PTCH1-215ENST00000547672 MAP3K9P80192 1104 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 PLCB2Q00722 1185 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 PNOCQ13519 176 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 IQCB1Q15051 598 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 ZYXQ15942 572 aaKnown RBP15.16■□□□□ 0.02
PTCH1-215ENST00000547672 GPR162Q16538 588 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 UBE2SQ16763 222 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 CDAN1Q8IWY9 1227 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 IGSF22Q8N9C0 903 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 ERMNQ8TAM6 284 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 C12orf42Q96LP6 360 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 TMEM60Q9H2L4 133 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 STK17AQ9UEE5 414 aa15.16■□□□□ 0.02
PTCH1-215ENST00000547672 ATAD5Q96QE3 1844 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP17L15C9J2P7 530 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP17L13C9JLJ4 530 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP17L11C9JVI0 530 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP17L18D6R9N7 530 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP17L22D6RA61 530 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP17L17D6RBQ6 530 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP17L19D6RCP7 530 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP17L20D6RJB6 530 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 WNT7AO00755 349 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 ADAMTS3O15072 1205 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 ERCC5P28715 1186 aaPredicted RBP15.15■□□□□ 0.02
PTCH1-215ENST00000547672 INPP5BP32019 993 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 CIITAP33076 1130 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 TECP42680 631 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 OAZ1P54368 228 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 ARHGAP4P98171 946 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP17L24Q0WX57 530 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 SPP2Q13103 211 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 IL17AQ16552 155 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 Q4G0T1 1027 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP17L6PQ6QN14 398 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 SARM1Q6SZW1 724 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 USP49Q70CQ1 688 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 LUZP1Q86V48 1076 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 PNMA8AQ86V59 439 aaPredicted RBP15.15■□□□□ 0.02
PTCH1-215ENST00000547672 LDHDQ86WU2 507 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 MBOAT7Q96N66 472 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 TANGO6Q9C0B7 1094 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 NT5C3AQ9H0P0 336 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 HOXC10Q9NYD6 342 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 CSADQ9Y600 493 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 KDM3AQ9Y4C1 1321 aa15.15■□□□□ 0.02
PTCH1-215ENST00000547672 FLOT1O75955 427 aa15.14■□□□□ 0.01
PTCH1-215ENST00000547672 HIRAP54198 1017 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-215ENST00000547672 E2F4Q16254 413 aa15.14■□□□□ 0.01
PTCH1-215ENST00000547672 TKFCQ3LXA3 575 aa15.14■□□□□ 0.01
PTCH1-215ENST00000547672 KIAA1755Q5JYT7 1200 aa15.14■□□□□ 0.01
PTCH1-215ENST00000547672 CCDC174Q6PII3 467 aa15.14■□□□□ 0.01
PTCH1-215ENST00000547672 TRIM5Q9C035 493 aa15.14■□□□□ 0.01
PTCH1-215ENST00000547672 TTC12Q9H892 705 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-215ENST00000547672 CCPG1Q9ULG6 757 aa15.14■□□□□ 0.01
PTCH1-215ENST00000547672 PPP1R9AQ9ULJ8 1098 aa15.14■□□□□ 0.01
PTCH1-215ENST00000547672 ZHX2Q9Y6X8 837 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms