RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MVKQ03426 396 aa6.27□□□□□ -1.41
SCAF11-210ENST00000547654 CYP2R1Q6VVX0 501 aa6.27□□□□□ -1.41
SCAF11-210ENST00000547654 CCDC81Q6ZN84 652 aa6.27□□□□□ -1.41
SCAF11-210ENST00000547654 C7orf61Q8IZ16 206 aa6.27□□□□□ -1.41
SCAF11-210ENST00000547654 C19orf47Q8N9M1 422 aaKnown RBP6.27□□□□□ -1.41
SCAF11-210ENST00000547654 KLHL6Q8WZ60 621 aa6.27□□□□□ -1.41
SCAF11-210ENST00000547654 DHRS1Q96LJ7 313 aa6.27□□□□□ -1.41
SCAF11-210ENST00000547654 SPATA32Q96LK8 384 aa6.27□□□□□ -1.41
SCAF11-210ENST00000547654 GPR20Q99678 358 aa6.27□□□□□ -1.41
SCAF11-210ENST00000547654 DBR1Q9UK59 544 aaKnown RBP6.27□□□□□ -1.41
SCAF11-210ENST00000547654 PMF1-BGLAPU3KQ54 211 aa6.27□□□□□ -1.41
SCAF11-210ENST00000547654 IRS2Q9Y4H2 1338 aa6.26□□□□□ -1.41
SCAF11-210ENST00000547654 A0A1W2PQH9 124 aa6.26□□□□□ -1.41
SCAF11-210ENST00000547654 FAM86C2PA6NEL3 165 aa6.26□□□□□ -1.41
SCAF11-210ENST00000547654 SRGAP3O43295 1099 aa6.26□□□□□ -1.41
SCAF11-210ENST00000547654 DBHP09172 617 aa6.26□□□□□ -1.41
SCAF11-210ENST00000547654 PUM1Q14671 1186 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCAF11-210ENST00000547654 ZNF827Q17R98 1081 aa6.26□□□□□ -1.41
SCAF11-210ENST00000547654 NT5DC1Q5TFE4 455 aa6.26□□□□□ -1.41
SCAF11-210ENST00000547654 LIPIQ6XZB0 460 aa6.26□□□□□ -1.41
SCAF11-210ENST00000547654 CCDC144CPQ8IYA2 1237 aa6.26□□□□□ -1.41
SCAF11-210ENST00000547654 ADGRG2Q8IZP9 1017 aa6.26□□□□□ -1.41
SCAF11-210ENST00000547654 INSRRP14616 1297 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 NCLP19338 710 aaKnown RBP6.25□□□□□ -1.41
SCAF11-210ENST00000547654 CASP7P55210 303 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 ZNF445P59923 1031 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 FOXO4P98177 505 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 VWA3BQ502W6 1294 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 DCAF15Q66K64 600 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 SEC16BQ96JE7 1060 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 SPATA25Q9BR10 227 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 SLC12A9Q9BXP2 914 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 RNF38Q9H0F5 515 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 PDLIM7Q9NR12 457 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 CNOT11Q9UKZ1 510 aaKnown RBP6.25□□□□□ -1.41
SCAF11-210ENST00000547654 ZNF451Q9Y4E5 1061 aa6.25□□□□□ -1.41
SCAF11-210ENST00000547654 A0A1B0GTL3 188 aa6.24□□□□□ -1.41
SCAF11-210ENST00000547654 PLA2G1BP04054 148 aaKnown RBP6.24□□□□□ -1.41
SCAF11-210ENST00000547654 TACR1P25103 407 aa6.24□□□□□ -1.41
SCAF11-210ENST00000547654 NOL9Q5SY16 702 aaKnown RBP6.24□□□□□ -1.41
SCAF11-210ENST00000547654 ZFYVE27Q5T4F4 411 aa6.24□□□□□ -1.41
SCAF11-210ENST00000547654 TDRD10Q5VZ19 366 aaKnown RBP6.24□□□□□ -1.41
SCAF11-210ENST00000547654 HHIPL2Q6UWX4 724 aa6.24□□□□□ -1.41
SCAF11-210ENST00000547654 FNIP1Q8TF40 1166 aa6.24□□□□□ -1.41
SCAF11-210ENST00000547654 FERD3LQ96RJ6 166 aa6.24□□□□□ -1.41
SCAF11-210ENST00000547654 GP6Q9HCN6 339 aa6.24□□□□□ -1.41
SCAF11-210ENST00000547654 HCFC2Q9Y5Z7 792 aa6.24□□□□□ -1.41
SCAF11-210ENST00000547654 F8W031 263 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-210ENST00000547654 H0Y8X5 98 aa6.23□□□□□ -1.41
SCAF11-210ENST00000547654 ATF4P18848 351 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-210ENST00000547654 CD247P20963 164 aa6.23□□□□□ -1.41
SCAF11-210ENST00000547654 FBLN1P23142 703 aa6.23□□□□□ -1.41
SCAF11-210ENST00000547654 SMARCC1Q92922 1105 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-210ENST00000547654 MCMBPQ9BTE3 642 aa6.23□□□□□ -1.41
SCAF11-210ENST00000547654 KLHL25Q9H0H3 589 aa6.23□□□□□ -1.41
SCAF11-210ENST00000547654 FGF10O15520 208 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-210ENST00000547654 NASPP49321 788 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-210ENST00000547654 CORO7P57737 925 aa6.22□□□□□ -1.41
SCAF11-210ENST00000547654 GJA9P57773 515 aa6.22□□□□□ -1.41
SCAF11-210ENST00000547654 PRR5P85299 388 aa6.22□□□□□ -1.41
SCAF11-210ENST00000547654 SAPCD2Q86UD0 394 aa6.22□□□□□ -1.41
SCAF11-210ENST00000547654 FERMT3Q86UX7 667 aa6.22□□□□□ -1.41
SCAF11-210ENST00000547654 CABP7Q86V35 215 aa6.22□□□□□ -1.41
SCAF11-210ENST00000547654 ALG3Q92685 438 aa6.22□□□□□ -1.41
SCAF11-210ENST00000547654 PLA2G2DQ9UNK4 145 aa6.22□□□□□ -1.41
SCAF11-210ENST00000547654 MYRFQ9Y2G1 1151 aa6.22□□□□□ -1.41
SCAF11-210ENST00000547654 FHOD1Q9Y613 1164 aa6.22□□□□□ -1.41
SCAF11-210ENST00000547654 A0A087WZG4 1122 aa6.21□□□□□ -1.42
SCAF11-210ENST00000547654 CAPNS1P04632 268 aa6.21□□□□□ -1.42
SCAF11-210ENST00000547654 NCAM1P13591 858 aa6.21□□□□□ -1.42
SCAF11-210ENST00000547654 ATF2P15336 505 aa6.21□□□□□ -1.42
SCAF11-210ENST00000547654 NOP2P46087 812 aaKnown RBP6.21□□□□□ -1.42
SCAF11-210ENST00000547654 EIF6P56537 245 aaKnown RBP6.21□□□□□ -1.42
SCAF11-210ENST00000547654 OR6P1Q8NGX9 317 aa6.21□□□□□ -1.42
SCAF11-210ENST00000547654 ZNF526Q8TF50 670 aaPredicted RBP6.21□□□□□ -1.42
SCAF11-210ENST00000547654 TINF2Q9BSI4 451 aa6.21□□□□□ -1.42
SCAF11-210ENST00000547654 SF3B6Q9Y3B4 125 aaKnown RBP6.21□□□□□ -1.42
SCAF11-210ENST00000547654 SH3D21A4FU49 640 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 TBC1D8O95759 1140 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 CD3EP07766 207 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 CNR2P34972 360 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 MC3RP41968 323 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 HTRA3P83110 453 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 CYP4F3Q08477 520 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 FIBCD1Q8N539 461 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 BRF1Q92994 677 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 PTCHD1Q96NR3 888 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 FCRL3Q96P31 734 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-210ENST00000547654 TANGO6Q9C0B7 1094 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 CCSER2Q9H7U1 834 aa6.2□□□□□ -1.42
SCAF11-210ENST00000547654 ASGR2P07307 311 aa6.19□□□□□ -1.42
SCAF11-210ENST00000547654 L1CAMP32004 1257 aa6.19□□□□□ -1.42
SCAF11-210ENST00000547654 B3GNT8Q7Z7M8 397 aa6.19□□□□□ -1.42
SCAF11-210ENST00000547654 CARFQ8N187 725 aa6.19□□□□□ -1.42
SCAF11-210ENST00000547654 DDX1Q92499 740 aaKnown RBP6.19□□□□□ -1.42
SCAF11-210ENST00000547654 HAUS7Q99871 368 aa6.19□□□□□ -1.42
SCAF11-210ENST00000547654 FAM86C1Q9NVL1 165 aa6.19□□□□□ -1.42
SCAF11-210ENST00000547654 PCDHB10Q9UN67 800 aa6.19□□□□□ -1.42
SCAF11-210ENST00000547654 TP53P04637 393 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-210ENST00000547654 FGRP09769 529 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms