RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 LZTS2Q9BRK4 669 aa18.46■□□□□ 0.55
DDX54-204ENST00000546898 TSEN34Q9BSV6 310 aaKnown RBP18.46■□□□□ 0.55
DDX54-204ENST00000546898 UPF3AQ9H1J1 476 aaKnown RBP18.46■□□□□ 0.55
DDX54-204ENST00000546898 SPC25Q9HBM1 224 aa18.46■□□□□ 0.55
DDX54-204ENST00000546898 GPHNQ9NQX3 736 aaPredicted RBP18.46■□□□□ 0.55
DDX54-204ENST00000546898 HMGB1P09429 215 aaKnown RBP18.45■□□□□ 0.54
DDX54-204ENST00000546898 SMARCA1P28370 1054 aa18.45■□□□□ 0.54
DDX54-204ENST00000546898 GNAQP50148 359 aa18.45■□□□□ 0.54
DDX54-204ENST00000546898 GHRHRQ02643 423 aa18.45■□□□□ 0.54
DDX54-204ENST00000546898 COL9A3Q14050 684 aaPredicted RBP18.45■□□□□ 0.54
DDX54-204ENST00000546898 LRRC26Q2I0M4 334 aa18.45■□□□□ 0.54
DDX54-204ENST00000546898 SLC35G1Q2M3R5 365 aa18.45■□□□□ 0.54
DDX54-204ENST00000546898 HOMER1Q86YM7 354 aa18.45■□□□□ 0.54
DDX54-204ENST00000546898 RASEFQ8IZ41 740 aa18.45■□□□□ 0.54
DDX54-204ENST00000546898 KCNB2Q92953 911 aa18.45■□□□□ 0.54
DDX54-204ENST00000546898 PURBQ96QR8 312 aaKnown RBP18.45■□□□□ 0.54
DDX54-204ENST00000546898 PIGSQ96S52 555 aa18.45■□□□□ 0.54
DDX54-204ENST00000546898 SPZ1Q9BXG8 430 aa18.45■□□□□ 0.54
DDX54-204ENST00000546898 MOXD2PA6NHM9 499 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 ADCY6O43306 1168 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 CYTH3O43739 400 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 EDNRBP24530 442 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 HSPA4P34932 840 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 GJA9P57773 515 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 TNFAIP2Q03169 654 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 SNX17Q15036 470 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 DHX32Q7L7V1 743 aaKnown RBP18.44■□□□□ 0.54
DDX54-204ENST00000546898 FBXO16Q8IX29 292 aaPredicted RBP18.44■□□□□ 0.54
DDX54-204ENST00000546898 SAMD3Q8N6K7 520 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 KLHDC9Q8NEP7 349 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 MYL10Q9BUA6 226 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 MAP3K20Q9NYL2 800 aaKnown RBP18.44■□□□□ 0.54
DDX54-204ENST00000546898 PCDHA1Q9Y5I3 950 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 SLC12A7Q9Y666 1083 aa18.44■□□□□ 0.54
DDX54-204ENST00000546898 PNMA6FA0A0J9YX94 578 aa18.43■□□□□ 0.54
DDX54-204ENST00000546898 PPP1R11O60927 126 aaPredicted RBP18.43■□□□□ 0.54
DDX54-204ENST00000546898 ADCYAP1R1P41586 468 aa18.43■□□□□ 0.54
DDX54-204ENST00000546898 NKX3-2P78367 333 aa18.43■□□□□ 0.54
DDX54-204ENST00000546898 EXOSC10Q01780 885 aaKnown RBP18.43■□□□□ 0.54
DDX54-204ENST00000546898 PDE4DQ08499 809 aa18.43■□□□□ 0.54
DDX54-204ENST00000546898 ADCK5Q3MIX3 580 aa18.43■□□□□ 0.54
DDX54-204ENST00000546898 C1orf53Q5VUE5 145 aa18.43■□□□□ 0.54
DDX54-204ENST00000546898 IQSEC1Q6DN90 963 aa18.43■□□□□ 0.54
DDX54-204ENST00000546898 TAPT1Q6NXT6 567 aa18.43■□□□□ 0.54
DDX54-204ENST00000546898 PCSK9Q8NBP7 692 aaKnown RBP18.43■□□□□ 0.54
DDX54-204ENST00000546898 SYTL5Q8TDW5 730 aaPredicted RBP18.43■□□□□ 0.54
DDX54-204ENST00000546898 LRRC2Q9BYS8 371 aa18.43■□□□□ 0.54
DDX54-204ENST00000546898 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.42■□□□□ 0.54
DDX54-204ENST00000546898 C6orf222P0C671 652 aaPredicted RBP18.42■□□□□ 0.54
DDX54-204ENST00000546898 HSD17B4P51659 736 aa18.42■□□□□ 0.54
DDX54-204ENST00000546898 ATN1P54259 1190 aaPredicted RBP18.42■□□□□ 0.54
DDX54-204ENST00000546898 CCSAPQ6IQ19 270 aaPredicted RBP18.42■□□□□ 0.54
DDX54-204ENST00000546898 SLC39A5Q6ZMH5 540 aa18.42■□□□□ 0.54
DDX54-204ENST00000546898 SYNE3Q6ZMZ3 975 aa18.42■□□□□ 0.54
DDX54-204ENST00000546898 EEPD1Q7L9B9 569 aa18.42■□□□□ 0.54
DDX54-204ENST00000546898 GNEQ9Y223 722 aaKnown RBP18.42■□□□□ 0.54
DDX54-204ENST00000546898 Q9Y3F1 56 aa18.42■□□□□ 0.54
DDX54-204ENST00000546898 DDX49Q9Y6V7 483 aaKnown RBP18.42■□□□□ 0.54
DDX54-204ENST00000546898 LTBP2Q14767 1821 aa18.42■□□□□ 0.54
DDX54-204ENST00000546898 TRIOBPQ9H2D6 2365 aa18.41■□□□□ 0.54
DDX54-204ENST00000546898 A0A1W2PQ45 241 aaPredicted RBP18.41■□□□□ 0.54
DDX54-204ENST00000546898 A0A1W2PQY0 241 aa18.41■□□□□ 0.54
DDX54-204ENST00000546898 RBM47A0AV96 593 aaKnown RBP18.41■□□□□ 0.54
DDX54-204ENST00000546898 OPLAHO14841 1288 aa18.41■□□□□ 0.54
DDX54-204ENST00000546898 CFBP00751 764 aa18.41■□□□□ 0.54
DDX54-204ENST00000546898 ACLYP53396 1101 aa18.41■□□□□ 0.54
DDX54-204ENST00000546898 RTP1P59025 263 aa18.41■□□□□ 0.54
DDX54-204ENST00000546898 TLK2Q86UE8 772 aa18.41■□□□□ 0.54
DDX54-204ENST00000546898 NSUN6Q8TEA1 469 aaKnown RBP18.41■□□□□ 0.54
DDX54-204ENST00000546898 TBC1D5Q92609 795 aa18.41■□□□□ 0.54
DDX54-204ENST00000546898 FERMT2Q96AC1 680 aa18.41■□□□□ 0.54
DDX54-204ENST00000546898 RRP36Q96EU6 259 aaKnown RBP18.41■□□□□ 0.54
DDX54-204ENST00000546898 SNX14Q9Y5W7 946 aa18.41■□□□□ 0.54
DDX54-204ENST00000546898 MYADML2A6NDP7 307 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 SMPD1P17405 629 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 RCAN1P53805 252 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 KCNA10Q16322 511 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 DUSP28Q4G0W2 176 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 APOA5Q6Q788 366 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 CHRDL2Q6WN34 429 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
DDX54-204ENST00000546898 MICU3Q86XE3 530 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 TAAR1Q96RJ0 339 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 IWS1Q96ST2 819 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 RMDN3Q96TC7 470 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 AP5M1Q9H0R1 490 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 PDGFCQ9NRA1 345 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 RBM28Q9NW13 759 aaKnown RBP18.4■□□□□ 0.54
DDX54-204ENST00000546898 COL20A1Q9P218 1284 aa18.4■□□□□ 0.54
DDX54-204ENST00000546898 SEC63Q9UGP8 760 aaKnown RBP18.4■□□□□ 0.54
DDX54-204ENST00000546898 ZMYND8Q9ULU4 1186 aaPredicted RBP18.4■□□□□ 0.54
DDX54-204ENST00000546898 COLQQ9Y215 455 aaPredicted RBP18.4■□□□□ 0.54
DDX54-204ENST00000546898 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
DDX54-204ENST00000546898 RXRAP19793 462 aa18.39■□□□□ 0.53
DDX54-204ENST00000546898 HABP4Q5JVS0 413 aaKnown RBP18.39■□□□□ 0.53
DDX54-204ENST00000546898 TMTC3Q6ZXV5 915 aa18.39■□□□□ 0.53
DDX54-204ENST00000546898 FANCBQ8NB91 859 aa18.39■□□□□ 0.53
DDX54-204ENST00000546898 SCFD2Q8WU76 684 aa18.39■□□□□ 0.53
DDX54-204ENST00000546898 TCEANC2Q96MN5 208 aa18.39■□□□□ 0.53
DDX54-204ENST00000546898 GLT1D1Q96MS3 346 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms