RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 RCSD1Q6JBY9 416 aa7.31□□□□□ -1.24
CCDC38-204ENST00000546816 RUFY4Q6ZNE9 571 aa7.31□□□□□ -1.24
CCDC38-204ENST00000546816 CARFQ8N187 725 aa7.31□□□□□ -1.24
CCDC38-204ENST00000546816 ALG3Q92685 438 aa7.31□□□□□ -1.24
CCDC38-204ENST00000546816 FERD3LQ96RJ6 166 aa7.31□□□□□ -1.24
CCDC38-204ENST00000546816 MCMBPQ9BTE3 642 aa7.31□□□□□ -1.24
CCDC38-204ENST00000546816 FAM86C1Q9NVL1 165 aa7.31□□□□□ -1.24
CCDC38-204ENST00000546816 FBLN5Q9UBX5 448 aa7.31□□□□□ -1.24
CCDC38-204ENST00000546816 DBR1Q9UK59 544 aaKnown RBP7.31□□□□□ -1.24
CCDC38-204ENST00000546816 MYRFQ9Y2G1 1151 aa7.31□□□□□ -1.24
CCDC38-204ENST00000546816 PMLP29590 882 aa7.3□□□□□ -1.24
CCDC38-204ENST00000546816 ZNF76P36508 570 aa7.3□□□□□ -1.24
CCDC38-204ENST00000546816 RGS22Q8NE09 1264 aa7.3□□□□□ -1.24
CCDC38-204ENST00000546816 ZDHHC15Q96MV8 337 aa7.3□□□□□ -1.24
CCDC38-204ENST00000546816 RXFP1Q9HBX9 757 aa7.3□□□□□ -1.24
CCDC38-204ENST00000546816 DIS3Q9Y2L1 958 aaKnown RBP7.3□□□□□ -1.24
CCDC38-204ENST00000546816 AURKAO14965 403 aa7.29□□□□□ -1.24
CCDC38-204ENST00000546816 ZNF394Q53GI3 561 aa7.29□□□□□ -1.24
CCDC38-204ENST00000546816 LNPKQ9C0E8 428 aa7.29□□□□□ -1.24
CCDC38-204ENST00000546816 BCAS3Q9H6U6 928 aa7.29□□□□□ -1.24
CCDC38-204ENST00000546816 METTL5Q9NRN9 209 aaKnown RBP7.29□□□□□ -1.24
CCDC38-204ENST00000546816 LTBP3Q9NS15 1303 aa7.28□□□□□ -1.24
CCDC38-204ENST00000546816 PPP1R11O60927 126 aaPredicted RBP7.28□□□□□ -1.24
CCDC38-204ENST00000546816 PUM1Q14671 1186 aaKnown RBP eCLIP7.28□□□□□ -1.24
CCDC38-204ENST00000546816 TCEAL1Q15170 157 aa7.28□□□□□ -1.24
CCDC38-204ENST00000546816 EEF1DP3Q658K8 133 aa7.28□□□□□ -1.24
CCDC38-204ENST00000546816 USP48Q86UV5 1035 aa7.28□□□□□ -1.24
CCDC38-204ENST00000546816 CPA5Q8WXQ8 436 aa7.28□□□□□ -1.24
CCDC38-204ENST00000546816 NOX5Q96PH1 765 aa7.28□□□□□ -1.24
CCDC38-204ENST00000546816 SPATA6Q9NWH7 488 aaPredicted RBP7.28□□□□□ -1.24
CCDC38-204ENST00000546816 PPT2Q9UMR5 302 aa7.28□□□□□ -1.24
CCDC38-204ENST00000546816 PCDHGB7Q9Y5F8 929 aa7.28□□□□□ -1.24
CCDC38-204ENST00000546816 ITGB3P05106 788 aa7.27□□□□□ -1.25
CCDC38-204ENST00000546816 CNR2P34972 360 aa7.27□□□□□ -1.25
CCDC38-204ENST00000546816 MAGEA10P43363 369 aaPredicted RBP7.27□□□□□ -1.25
CCDC38-204ENST00000546816 RACK1P63244 317 aaKnown RBP7.27□□□□□ -1.25
CCDC38-204ENST00000546816 TRIM26Q12899 539 aaPredicted RBP7.27□□□□□ -1.25
CCDC38-204ENST00000546816 PPP2R5DQ14738 602 aa7.27□□□□□ -1.25
CCDC38-204ENST00000546816 ZNF827Q17R98 1081 aa7.27□□□□□ -1.25
CCDC38-204ENST00000546816 NETO2Q8NC67 525 aa7.27□□□□□ -1.25
CCDC38-204ENST00000546816 SMARCC2Q8TAQ2 1214 aa7.27□□□□□ -1.25
CCDC38-204ENST00000546816 DDX1Q92499 740 aaKnown RBP7.27□□□□□ -1.25
CCDC38-204ENST00000546816 RBM15Q96T37 977 aaKnown RBP eCLIP7.27□□□□□ -1.25
CCDC38-204ENST00000546816 GPR20Q99678 358 aa7.27□□□□□ -1.25
CCDC38-204ENST00000546816 MTA3Q9BTC8 594 aa7.27□□□□□ -1.25
CCDC38-204ENST00000546816 RECKO95980 971 aa7.26□□□□□ -1.25
CCDC38-204ENST00000546816 CACNB2Q08289 660 aaPredicted RBP7.26□□□□□ -1.25
CCDC38-204ENST00000546816 SLC9A5Q14940 896 aa7.26□□□□□ -1.25
CCDC38-204ENST00000546816 ZNF761Q86XN6 746 aaPredicted RBP7.26□□□□□ -1.25
CCDC38-204ENST00000546816 LZTR1Q8N653 840 aa7.26□□□□□ -1.25
CCDC38-204ENST00000546816 PEX11GQ96HA9 241 aa7.26□□□□□ -1.25
CCDC38-204ENST00000546816 HAUS7Q99871 368 aa7.26□□□□□ -1.25
CCDC38-204ENST00000546816 KLHL25Q9H0H3 589 aa7.26□□□□□ -1.25
CCDC38-204ENST00000546816 WHRNQ9P202 907 aa7.26□□□□□ -1.25
CCDC38-204ENST00000546816 RWDD3Q9Y3V2 267 aa7.26□□□□□ -1.25
CCDC38-204ENST00000546816 VAMP1P23763 118 aa7.25□□□□□ -1.25
CCDC38-204ENST00000546816 SARSP49591 514 aaKnown RBP7.25□□□□□ -1.25
CCDC38-204ENST00000546816 GJA9P57773 515 aa7.25□□□□□ -1.25
CCDC38-204ENST00000546816 ADAM17P78536 824 aa7.25□□□□□ -1.25
CCDC38-204ENST00000546816 FBXW10Q5XX13 1052 aa7.25□□□□□ -1.25
CCDC38-204ENST00000546816 CABP7Q86V35 215 aa7.25□□□□□ -1.25
CCDC38-204ENST00000546816 HOMEZQ8IX15 550 aa7.25□□□□□ -1.25
CCDC38-204ENST00000546816 RNF34Q969K3 372 aa7.25□□□□□ -1.25
CCDC38-204ENST00000546816 DDX41Q9UJV9 622 aaKnown RBP7.25□□□□□ -1.25
CCDC38-204ENST00000546816 NUDT5Q9UKK9 219 aa7.25□□□□□ -1.25
CCDC38-204ENST00000546816 PALD1Q9ULE6 856 aa7.25□□□□□ -1.25
CCDC38-204ENST00000546816 STXBP3O00186 592 aa7.24□□□□□ -1.25
CCDC38-204ENST00000546816 LINC00482Q8N8I6 264 aa7.24□□□□□ -1.25
CCDC38-204ENST00000546816 ADCY4Q8NFM4 1077 aa7.24□□□□□ -1.25
CCDC38-204ENST00000546816 NTMQ9P121 344 aa7.24□□□□□ -1.25
CCDC38-204ENST00000546816 VAMP4O75379 141 aa7.23□□□□□ -1.25
CCDC38-204ENST00000546816 ZBTB7AO95365 584 aa7.23□□□□□ -1.25
CCDC38-204ENST00000546816 KRTAP3-1Q9BYR8 98 aa7.23□□□□□ -1.25
CCDC38-204ENST00000546816 C2orf71A6NGG8 1288 aa7.22□□□□□ -1.25
CCDC38-204ENST00000546816 METTL16Q86W50 562 aaKnown RBP7.22□□□□□ -1.25
CCDC38-204ENST00000546816 CPNE8Q86YQ8 564 aa7.22□□□□□ -1.25
CCDC38-204ENST00000546816 ADAMTS17Q8TE56 1095 aa7.22□□□□□ -1.25
CCDC38-204ENST00000546816 ZBTB8AQ96BR9 441 aa7.22□□□□□ -1.25
CCDC38-204ENST00000546816 SMPD4Q9NXE4 827 aa7.22□□□□□ -1.25
CCDC38-204ENST00000546816 GULP1Q9UBP9 304 aa7.22□□□□□ -1.25
CCDC38-204ENST00000546816 BACE2Q9Y5Z0 518 aa7.22□□□□□ -1.25
CCDC38-204ENST00000546816 SCAMP3O14828 347 aaKnown RBP7.21□□□□□ -1.26
CCDC38-204ENST00000546816 TNFRSF1AP19438 455 aa7.21□□□□□ -1.26
CCDC38-204ENST00000546816 SEPHS1P49903 392 aa7.21□□□□□ -1.26
CCDC38-204ENST00000546816 DPY19L1Q2PZI1 675 aa7.21□□□□□ -1.26
CCDC38-204ENST00000546816 GNPTABQ3T906 1256 aa7.21□□□□□ -1.26
CCDC38-204ENST00000546816 HEATR6Q6AI08 1181 aaKnown RBP7.21□□□□□ -1.26
CCDC38-204ENST00000546816 WWC2Q6AWC2 1192 aa7.21□□□□□ -1.26
CCDC38-204ENST00000546816 TTLL7Q6ZT98 887 aa7.21□□□□□ -1.26
CCDC38-204ENST00000546816 ARHGEF39Q8N4T4 335 aa7.21□□□□□ -1.26
CCDC38-204ENST00000546816 GBP3Q9H0R5 595 aa7.21□□□□□ -1.26
CCDC38-204ENST00000546816 PHAXQ9H814 394 aaKnown RBP7.21□□□□□ -1.26
CCDC38-204ENST00000546816 CGGBP1Q9UFW8 167 aaPredicted RBP7.21□□□□□ -1.26
CCDC38-204ENST00000546816 SLC12A7Q9Y666 1083 aa7.21□□□□□ -1.26
CCDC38-204ENST00000546816 C7orf72A4D263 438 aa7.2□□□□□ -1.26
CCDC38-204ENST00000546816 EPHX1P07099 455 aa7.2□□□□□ -1.26
CCDC38-204ENST00000546816 C8BP07358 591 aa7.2□□□□□ -1.26
CCDC38-204ENST00000546816 GRB10Q13322 594 aa7.2□□□□□ -1.26
CCDC38-204ENST00000546816 COL9A2Q14055 689 aaPredicted RBP7.2□□□□□ -1.26
CCDC38-204ENST00000546816 KRTAP5-3Q6L8H2 238 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms