RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 CYP2C18P33260 490 aa21.93■■□□□ 1.1
CHERP-204ENST00000546538 TMEM240Q5SV17 173 aa21.93■■□□□ 1.1
CHERP-204ENST00000546538 RASIP1Q5U651 963 aa21.93■■□□□ 1.1
CHERP-204ENST00000546538 RBM47A0AV96 593 aaKnown RBP21.92■■□□□ 1.1
CHERP-204ENST00000546538 PTPDC1A2A3K4 754 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 KDM4AO75164 1064 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 ACRP10323 421 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 CALML3P27482 149 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 PDE4AP27815 886 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 RPS6P62753 249 aaKnown RBP21.92■■□□□ 1.1
CHERP-204ENST00000546538 ITGA7Q13683 1181 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 DUSP28Q4G0W2 176 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 KIAA1211Q6ZU35 1233 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 MYLIPQ8WY64 445 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 ESR2Q92731 530 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 VWCEQ96DN2 955 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 UBA5Q9GZZ9 404 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 TRPV6Q9H1D0 765 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 RNF41Q9H4P4 317 aaPredicted RBP21.92■■□□□ 1.1
CHERP-204ENST00000546538 Q9Y3F1 56 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 WDR19Q8NEZ3 1342 aa21.92■■□□□ 1.1
CHERP-204ENST00000546538 B4E1Z4 1266 aa21.91■■□□□ 1.1
CHERP-204ENST00000546538 ZNF213O14771 459 aa21.91■■□□□ 1.1
CHERP-204ENST00000546538 EDNRBP24530 442 aa21.91■■□□□ 1.1
CHERP-204ENST00000546538 DGKHQ86XP1 1220 aa21.91■■□□□ 1.1
CHERP-204ENST00000546538 ANKS1AQ92625 1134 aa21.91■■□□□ 1.1
CHERP-204ENST00000546538 AP5M1Q9H0R1 490 aa21.91■■□□□ 1.1
CHERP-204ENST00000546538 GRXCR1A8MXD5 290 aa21.9■■□□□ 1.1
CHERP-204ENST00000546538 B4GALT4O60513 344 aa21.9■■□□□ 1.1
CHERP-204ENST00000546538 MFAP1P55081 439 aaKnown RBP21.9■■□□□ 1.1
CHERP-204ENST00000546538 RNF207Q6ZRF8 634 aa21.9■■□□□ 1.1
CHERP-204ENST00000546538 ENAHQ8N8S7 591 aaPredicted RBP21.9■■□□□ 1.1
CHERP-204ENST00000546538 TBC1D5Q92609 795 aa21.9■■□□□ 1.1
CHERP-204ENST00000546538 DIAPH3Q9NSV4 1193 aa21.9■■□□□ 1.1
CHERP-204ENST00000546538 ADD3Q9UEY8 706 aaKnown RBP21.9■■□□□ 1.1
CHERP-204ENST00000546538 CABYRO75952 493 aa21.89■■□□□ 1.1
CHERP-204ENST00000546538 PNMA1Q8ND90 353 aa21.89■■□□□ 1.1
CHERP-204ENST00000546538 DSCC1Q9BVC3 393 aa21.89■■□□□ 1.1
CHERP-204ENST00000546538 WDR11Q9BZH6 1224 aa21.89■■□□□ 1.1
CHERP-204ENST00000546538 WNT8AQ9H1J5 351 aa21.89■■□□□ 1.1
CHERP-204ENST00000546538 ZSWIM5Q9P217 1185 aa21.89■■□□□ 1.1
CHERP-204ENST00000546538 MUC3AQ02505 3323 aa21.89■■□□□ 1.09
CHERP-204ENST00000546538 LOC102724159A0A0B4J2E5 919 aa21.89■■□□□ 1.09
CHERP-204ENST00000546538 GSPT1P15170 499 aaKnown RBP21.89■■□□□ 1.09
CHERP-204ENST00000546538 DNAJB2P25686 324 aa21.89■■□□□ 1.09
CHERP-204ENST00000546538 PBX2P40425 430 aa21.89■■□□□ 1.09
CHERP-204ENST00000546538 PPIGQ13427 754 aaKnown RBP eCLIP21.89■■□□□ 1.093e-8■■■■□ 24.3
CHERP-204ENST00000546538 GRIN2CQ14957 1233 aa21.89■■□□□ 1.09
CHERP-204ENST00000546538 PWP2Q15269 919 aaKnown RBP21.89■■□□□ 1.09
CHERP-204ENST00000546538 USH1GQ495M9 461 aa21.89■■□□□ 1.09
CHERP-204ENST00000546538 ZNF365Q70YC5 407 aa21.89■■□□□ 1.09
CHERP-204ENST00000546538 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.89■■□□□ 1.09
CHERP-204ENST00000546538 NOC4LQ9BVI4 516 aaKnown RBP21.89■■□□□ 1.09
CHERP-204ENST00000546538 COL20A1Q9P218 1284 aa21.89■■□□□ 1.09
CHERP-204ENST00000546538 SCN10AQ9Y5Y9 1956 aa21.88■■□□□ 1.09
CHERP-204ENST00000546538 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.88■■□□□ 1.09
CHERP-204ENST00000546538 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.88■■□□□ 1.09
CHERP-204ENST00000546538 GPATCH4Q5T3I0 446 aaKnown RBP21.88■■□□□ 1.09
CHERP-204ENST00000546538 PPP1R13LQ8WUF5 828 aa21.88■■□□□ 1.09
CHERP-204ENST00000546538 COPS5Q92905 334 aa21.88■■□□□ 1.09
CHERP-204ENST00000546538 ZSCAN10Q96SZ4 725 aaPredicted RBP21.88■■□□□ 1.09
CHERP-204ENST00000546538 CXXC1Q9P0U4 656 aaPredicted RBP21.88■■□□□ 1.09
CHERP-204ENST00000546538 TMEM265A0A087WTH1 108 aa21.87■■□□□ 1.09
CHERP-204ENST00000546538 TLR3O15455 904 aaKnown RBP21.87■■□□□ 1.09
CHERP-204ENST00000546538 ARIH2O95376 493 aa21.87■■□□□ 1.09
CHERP-204ENST00000546538 PURAQ00577 322 aaKnown RBP21.87■■□□□ 1.09
CHERP-204ENST00000546538 CDC37Q16543 378 aaPredicted RBP21.87■■□□□ 1.09
CHERP-204ENST00000546538 ADGRF4Q8IZF3 695 aa21.87■■□□□ 1.09
CHERP-204ENST00000546538 TMEM199Q8N511 208 aa21.87■■□□□ 1.09
CHERP-204ENST00000546538 MAFAQ8NHW3 353 aaPredicted RBP21.87■■□□□ 1.09
CHERP-204ENST00000546538 HIPK3Q9H422 1215 aa21.87■■□□□ 1.09
CHERP-204ENST00000546538 TNKSO95271 1327 aa21.86■■□□□ 1.09
CHERP-204ENST00000546538 REV3LO60673 3130 aa21.86■■□□□ 1.09
CHERP-204ENST00000546538 PBX4Q9BYU1 374 aa21.86■■□□□ 1.09
CHERP-204ENST00000546538 ALDH8A1Q9H2A2 487 aaPredicted RBP21.86■■□□□ 1.09
CHERP-204ENST00000546538 IL23AQ9NPF7 189 aa21.86■■□□□ 1.09
CHERP-204ENST00000546538 TRMT13Q9NUP7 481 aaKnown RBP21.86■■□□□ 1.09
CHERP-204ENST00000546538 CCL23P55773 120 aa21.85■■□□□ 1.09
CHERP-204ENST00000546538 IQCA1Q86XH1 822 aa21.85■■□□□ 1.09
CHERP-204ENST00000546538 RGS22Q8NE09 1264 aa21.85■■□□□ 1.09
CHERP-204ENST00000546538 DNERQ8NFT8 737 aa21.85■■□□□ 1.09
CHERP-204ENST00000546538 COL25A1Q9BXS0 654 aaPredicted RBP21.85■■□□□ 1.09
CHERP-204ENST00000546538 GBF1Q92538 1859 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 HIP1O00291 1037 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 ZEB2O60315 1214 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 PDE4DQ08499 809 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 SLC35G1Q2M3R5 365 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 CYB5R4Q7L1T6 521 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 STAG2Q8N3U4 1231 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 OR6J1Q8NGC5 347 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 SYTL5Q8TDW5 730 aaPredicted RBP21.84■■□□□ 1.09
CHERP-204ENST00000546538 HERVK_113Q902F9 699 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 KAT14Q9H8E8 782 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 JMJD4Q9H9V9 463 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 PNMA2Q9UL42 364 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 TAF6LQ9Y6J9 622 aa21.84■■□□□ 1.09
CHERP-204ENST00000546538 OPLAHO14841 1288 aa21.83■■□□□ 1.09
CHERP-204ENST00000546538 SEC23AQ15436 765 aa21.83■■□□□ 1.09
CHERP-204ENST00000546538 IMMTQ16891 758 aaKnown RBP21.83■■□□□ 1.09
CHERP-204ENST00000546538 QRICH1Q2TAL8 776 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms