RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 HLA-DOAP06340 250 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 HPDP32754 393 aaPredicted RBP10.88□□□□□ -0.67
TRAF1-203ENST00000546084 MAGEA1P43355 309 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 CDK8P49336 464 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 VSNL1P62760 191 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 SND1Q7KZF4 910 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRAF1-203ENST00000546084 FAM205AQ6ZU69 1335 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 CLIC2O15247 247 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 NCK2O43639 380 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 IVLP07476 585 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 OR52Z1P0C646 297 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 ABCB4P21439 1286 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 GJC1P36383 396 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 STAT3P40763 770 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 ATP1A2P50993 1020 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 GSTO1P78417 241 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 CASP8Q14790 479 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 NR1I3Q14994 352 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 CCDC84Q86UT8 332 aaPredicted RBP10.88□□□□□ -0.67
TRAF1-203ENST00000546084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRAF1-203ENST00000546084 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 ARPP21Q9UBL0 812 aaPredicted RBP10.88□□□□□ -0.67
TRAF1-203ENST00000546084 NPHP3-ACAD11A0A0J9YXS1 232 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 POLR2FP61218 127 aaKnown RBP10.88□□□□□ -0.67
TRAF1-203ENST00000546084 TROAPQ12815 778 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 IFIH1Q9BYX4 1025 aaKnown RBP10.88□□□□□ -0.67
TRAF1-203ENST00000546084 GOLPH3Q9H4A6 298 aa10.88□□□□□ -0.67
TRAF1-203ENST00000546084 THRAP3Q9Y2W1 955 aaKnown RBP10.88□□□□□ -0.67
TRAF1-203ENST00000546084 ESYT3A0FGR9 886 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 TLDC2A0PJX2 215 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 ACTN4O43707 911 aaKnown RBP10.87□□□□□ -0.67
TRAF1-203ENST00000546084 GTPBP6O43824 516 aaPredicted RBP10.87□□□□□ -0.67
TRAF1-203ENST00000546084 TOM1O60784 492 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 PLEKP08567 350 aaPredicted RBP10.87□□□□□ -0.67
TRAF1-203ENST00000546084 APBA1Q02410 837 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 DPYDQ12882 1025 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 NEK8Q86SG6 692 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 MLXIPQ9HAP2 919 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 UBR1Q8IWV7 1749 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 TCP10L2B9ZVM9 353 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 MFAP3LO75121 409 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 MOCS3O95396 460 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 FTCDO95954 541 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 SERPINB2P05120 415 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 ERCC5P28715 1186 aaPredicted RBP10.87□□□□□ -0.67
TRAF1-203ENST00000546084 ADCY7P51828 1080 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 STK4Q13043 487 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 TMTC1Q8IUR5 882 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 TRIML1Q8N9V2 468 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 GSDMAQ96QA5 445 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 PANX2Q96RD6 677 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 NAA15Q9BXJ9 866 aaKnown RBP10.87□□□□□ -0.67
TRAF1-203ENST00000546084 FAM204AQ9H8W3 233 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 MYO6Q9UM54 1294 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 PCDHA4Q9UN74 947 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 HYOU1Q9Y4L1 999 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 FER1L4A9Z1Z3 1794 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 PMS1P54277 932 aaKnown RBP10.87□□□□□ -0.67
TRAF1-203ENST00000546084 TBX2Q13207 712 aaPredicted RBP10.87□□□□□ -0.67
TRAF1-203ENST00000546084 ARHGAP44Q17R89 818 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 MIGA2Q7L4E1 593 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 TPH2Q8IWU9 490 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 VGLL2Q8N8G2 317 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 PCDHA12Q9UN75 941 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 TOPAZ1Q8N9V7 1692 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 CDHR2Q9BYE9 1310 aa10.87□□□□□ -0.67
TRAF1-203ENST00000546084 ABCC12Q96J65 1359 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 SPDYE3A6NKU9 549 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 ZNF18P17022 549 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 TCP11X2Q5H9J9 407 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 RNF187Q5TA31 235 aaPredicted RBP10.86□□□□□ -0.67
TRAF1-203ENST00000546084 PHLDB2Q86SQ0 1253 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 FBXL16Q8N461 479 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 NOA1Q8NC60 698 aaKnown RBP10.86□□□□□ -0.67
TRAF1-203ENST00000546084 ATP8A2Q9NTI2 1148 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 A0A1B0GTH6 734 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 PKN1Q16512 942 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 BEND6Q5SZJ8 279 aaPredicted RBP10.86□□□□□ -0.67
TRAF1-203ENST00000546084 ANKZF1Q9H8Y5 726 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 DISC1Q9NRI5 854 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 PCDHA1Q9Y5I3 950 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 SAR1BQ9Y6B6 198 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 RGPD2P0DJD1 1756 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 E9PMD0 336 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 TACC1O75410 805 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 WDR78Q5VTH9 848 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 CTNNBL1Q8WYA6 563 aaPredicted RBP10.86□□□□□ -0.67
TRAF1-203ENST00000546084 PSTPIP2Q9H939 334 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 MST1RQ04912 1400 aa10.86□□□□□ -0.67
TRAF1-203ENST00000546084 USP17L10C9JJH3 530 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 TBCAO75347 108 aaKnown RBP10.85□□□□□ -0.67
TRAF1-203ENST00000546084 FGFR2P21802 821 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 GPSM2P81274 684 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 EHHADHQ08426 723 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 MAP9Q49MG5 647 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 GPBP1Q86WP2 473 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 RNF225M0QZC1 329 aaPredicted RBP10.85□□□□□ -0.67
TRAF1-203ENST00000546084 NDUFA10O95299 355 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 GYPCP04921 128 aa10.85□□□□□ -0.67
TRAF1-203ENST00000546084 AKR1B1P15121 316 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms