RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 RAB3IPQ96QF0 476 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-209ENST00000545689 LIG4P49917 911 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 CCT6BQ92526 530 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 RNF34Q969K3 372 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-209ENST00000545689 EIF3CLB5ME19 914 aaKnown RBP13.72□□□□□ -0.21
COL4A6-209ENST00000545689 ATP2A3Q93084 1043 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 HAUS1Q96CS2 278 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 PSMD1Q99460 953 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 EIF3CQ99613 913 aaKnown RBP13.72□□□□□ -0.21
COL4A6-209ENST00000545689 SERPINA10Q9UK55 444 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 PASKQ96RG2 1323 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 DMP1Q13316 513 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-209ENST00000545689 VPS37BQ9H9H4 285 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 BCAP29Q9UHQ4 241 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 PNPLA6Q8IY17 1366 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 STX2P32856 288 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 EPHB4P54760 987 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 LMNB2Q03252 620 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 SMC1BQ8NDV3 1235 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 PUS7LQ9H0K6 701 aaKnown RBP13.72□□□□□ -0.21
COL4A6-209ENST00000545689 PCDHA1Q9Y5I3 950 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 TBC1D8O95759 1140 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 TNNC2P02585 160 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 GOLGA8HP0CJ92 632 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 MFAP3P55082 362 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 MYL7Q01449 175 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 HACE1Q8IYU2 909 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 BRIP1Q9BX63 1249 aa13.72□□□□□ -0.21
COL4A6-209ENST00000545689 CCDC160A6NGH7 325 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 BUB1O43683 1085 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 ABCB5Q2M3G0 1257 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 FNBP4Q8N3X1 1017 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-209ENST00000545689 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
COL4A6-209ENST00000545689 CACTINQ8WUQ7 758 aaKnown RBP13.71□□□□□ -0.21
COL4A6-209ENST00000545689 RSAD2Q8WXG1 361 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 CNKSR1Q969H4 720 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 TULP4Q9NRJ4 1543 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 AFPP02771 609 aaKnown RBP13.71□□□□□ -0.21
COL4A6-209ENST00000545689 GUCY2FP51841 1108 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 SLC35F6Q8N357 371 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 VCX3BQ9H321 246 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 ZBTB1Q9Y2K1 713 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 STAM2O75886 525 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 LARGE1O95461 756 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 PSMC2P35998 433 aaKnown RBP13.71□□□□□ -0.21
COL4A6-209ENST00000545689 USPL1Q5W0Q7 1092 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 RESP18Q5W5W9 173 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 ARMCX5Q6P1M9 558 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 LCORLQ8N3X6 602 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 WDR11Q9BZH6 1224 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 ABCA6Q8N139 1617 aa13.71□□□□□ -0.21
COL4A6-209ENST00000545689 ZNF131P52739 623 aa13.71□□□□□ -0.22
COL4A6-209ENST00000545689 RASA3Q14644 834 aa13.71□□□□□ -0.22
COL4A6-209ENST00000545689 TAF12Q16514 161 aa13.71□□□□□ -0.22
COL4A6-209ENST00000545689 XKR9Q5GH70 373 aa13.71□□□□□ -0.22
COL4A6-209ENST00000545689 ASAP1Q9ULH1 1129 aa13.71□□□□□ -0.22
COL4A6-209ENST00000545689 BBOX1O75936 387 aa13.71□□□□□ -0.22
COL4A6-209ENST00000545689 POLR2BP30876 1174 aaKnown RBP13.71□□□□□ -0.22
COL4A6-209ENST00000545689 ZBED6P86452 979 aa13.71□□□□□ -0.22
COL4A6-209ENST00000545689 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.71□□□□□ -0.22
COL4A6-209ENST00000545689 SPTLC3Q9NUV7 552 aa13.71□□□□□ -0.22
COL4A6-209ENST00000545689 CRCPO75575 148 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 HSPA6P17066 643 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 ABCB4P21439 1286 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 CCNE1P24864 410 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 STAG1Q8WVM7 1258 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 GPHNQ9NQX3 736 aaPredicted RBP13.7□□□□□ -0.22
COL4A6-209ENST00000545689 LMTK2Q8IWU2 1503 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 KRT19P08727 400 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 HSPA1LP34931 641 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 FKBP3Q00688 224 aaKnown RBP13.7□□□□□ -0.22
COL4A6-209ENST00000545689 NLGN1Q8N2Q7 840 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 KLHL14Q9P2G3 628 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 THAP12O43422 761 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 ERCC3P19447 782 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 CDC37Q16543 378 aaPredicted RBP13.7□□□□□ -0.22
COL4A6-209ENST00000545689 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 PHLDB2Q86SQ0 1253 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 TBC1D31Q96DN5 1066 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
COL4A6-209ENST00000545689 PCK1P35558 622 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 IRX3P78415 501 aaPredicted RBP13.7□□□□□ -0.22
COL4A6-209ENST00000545689 NAA25Q14CX7 972 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 CCDC24Q8N4L8 307 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 PBKQ96KB5 322 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 VCXQ9H320 206 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 ATF7P17544 494 aaPredicted RBP13.7□□□□□ -0.22
COL4A6-209ENST00000545689 TPD52P55327 224 aaPredicted RBP13.7□□□□□ -0.22
COL4A6-209ENST00000545689 MAP7Q14244 749 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 NSMCE1Q8WV22 266 aa13.7□□□□□ -0.22
COL4A6-209ENST00000545689 DHX36Q9H2U1 1008 aaKnown RBP13.7□□□□□ -0.22
COL4A6-209ENST00000545689 TMEM232C9JQI7 657 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 ADCY8P40145 1251 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 PPP2R5AQ15172 486 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 KRT12Q99456 494 aa13.69□□□□□ -0.22
COL4A6-209ENST00000545689 DDX23Q9BUQ8 820 aaKnown RBP13.69□□□□□ -0.22
COL4A6-209ENST00000545689 SPZ1Q9BXG8 430 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms