RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, human

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNN1A-223	ENST00000545605	CRYGN	Q8WXF5	182 aa		13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	MRPS27	Q92552	414 aa	Known RBP	13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	FERMT2	Q96AC1	680 aa		13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	ANP32E	Q9BTT0	268 aa		13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	TEX13B	Q9BXU2	312 aa		13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	EHMT1	Q9H9B1	1298 aa		13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	DDX19A	Q9NUU7	478 aa	Known RBP	13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	MAP3K20	Q9NYL2	800 aa	Known RBP	13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	PCDHA7	Q9UN72	937 aa		13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	SLC45A1	Q9Y2W3	748 aa		13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	KIAA1217	Q5T5P2	1943 aa		13.19	□□□□□ -0.3
SCNN1A-223	ENST00000545605	FAM237A	A0A1B0GTK4	181 aa		13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	NEMF	O60524	1076 aa		13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	PTPRE	P23469	700 aa		13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	PRPH	P41219	470 aa		13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	IRX3	P78415	501 aa	Predicted RBP	13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	USP17L6P	Q6QN14	398 aa		13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	MCF2L2	Q86YR7	1114 aa		13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	ZNF579	Q8NAF0	562 aa	Known RBP	13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	SLC10A4	Q96EP9	437 aa		13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	RAVER2	Q9HCJ3	691 aa	Known RBP	13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	PNMA3	Q9UL41	463 aa		13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	SRPRB	Q9Y5M8	271 aa	Known RBP	13.18	□□□□□ -0.3
SCNN1A-223	ENST00000545605	RPTOR	Q8N122	1335 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	KIF3C	O14782	793 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	POLR2M	P0CAP2	368 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CETP	P11597	493 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	MCM7	P33993	719 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	GTF2A2	P52657	109 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	FAM160A1	Q05DH4	1040 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	LETM2	Q2VYF4	491 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CCDC183	Q5T5S1	534 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	SNRNP48	Q6IEG0	339 aa	Known RBP	13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	PPP4R3A	Q6IN85	833 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CAVIN1	Q6NZI2	390 aa	Known RBP	13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	FSIP1	Q8NA03	581 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CLEC4D	Q8WXI8	215 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	AGBL1	Q96MI9	1066 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	RNF146	Q9NTX7	359 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	HOXC10	Q9NYD6	342 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	RABGAP1	Q9Y3P9	1069 aa		13.17	□□□□□ -0.3
SCNN1A-223	ENST00000545605	NFIB	O00712	420 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CCNT1	O60563	726 aa	Known RBP	13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CFB	P00751	764 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	OR52Z1	P0C646	297 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	ALAS1	P13196	640 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	LIG1	P18858	919 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	ATP2B1	P20020	1258 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	MARCKS	P29966	332 aa	Predicted RBP	13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	COPB2	P35606	906 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	HERVK_113	P62684	666 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	ARHGAP4	P98171	946 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	PTGDR	Q13258	359 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	TMEM132B	Q14DG7	1078 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	SPRYD7	Q5W111	196 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	RESP18	Q5W5W9	173 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	RASAL3	Q86YV0	1011 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CPXCR1	Q8N123	301 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	SMC1B	Q8NDV3	1235 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	MBOAT7	Q96N66	472 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	P2RX7	Q99572	595 aa	Known RBP	13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	GOLPH3L	Q9H4A5	285 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	TMEM63C	Q9P1W3	806 aa		13.16	□□□□□ -0.3
SCNN1A-223	ENST00000545605	WDR81	Q562E7	1941 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	MGAM	O43451	1857 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	TDP2	O95551	362 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	OSBP	P22059	807 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CMA1	P23946	247 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	USP11	P51784	963 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	HUNK	P57058	714 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	ZNF174	Q15697	407 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CST9	Q5W186	159 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	GPAT2	Q6NUI2	795 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	SHC4	Q6S5L8	630 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	ANKRD23	Q86SG2	305 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	POTED	Q86YR6	584 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CCAR1	Q8IX12	1150 aa	Known RBP	13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	MS4A4A	Q96JQ5	239 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	ACAD9	Q9H845	621 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	HPSE	Q9Y251	543 aa		13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.15	□□□□□ -0.3
SCNN1A-223	ENST00000545605	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	CCL15-CCL14	A0A0B4J2E2	113 aa		13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	SLC37A4	O43826	429 aa		13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	KIN	O60870	393 aa	Known RBP	13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	CYP3A4	P08684	503 aa		13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	PFKFB1	P16118	471 aa		13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	CYP3A7	P24462	503 aa		13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	HOXA13	P31271	388 aa	Predicted RBP	13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	CIITA	P33076	1130 aa		13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	LONP1	P36776	959 aa	Known RBP	13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	CCL15	Q16663	113 aa		13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	MUM1L1	Q5H9M0	696 aa		13.14	□□□□□ -0.31
SCNN1A-223	ENST00000545605	SLC30A10	Q6XR72	485 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms