RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 CPLX1O14810 134 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 ZBED4O75132 1171 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 HOXC6P09630 235 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 GOLGA8HP0CJ92 632 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 EPHB4P54760 987 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 CCT2P78371 535 aaKnown RBP13.71□□□□□ -0.21
LTBR-214ENST00000545445 TRAF1Q13077 416 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 ME3Q16798 604 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 TTBK2Q6IQ55 1244 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.21
LTBR-214ENST00000545445 CCDC144CPQ8IYA2 1237 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 STAG2Q8N3U4 1231 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 GTF3C6Q969F1 213 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 KIFC2Q96AC6 838 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 RNPC3Q96LT9 517 aaKnown RBP13.71□□□□□ -0.21
LTBR-214ENST00000545445 LARP6Q9BRS8 491 aaKnown RBP13.71□□□□□ -0.21
LTBR-214ENST00000545445 RIOX1Q9H6W3 641 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.21
LTBR-214ENST00000545445 FBXO28Q9NVF7 368 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 BTBD7Q9P203 1132 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 PRR12Q9ULL5 1215 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 CTDP1Q9Y5B0 961 aaPredicted RBP13.71□□□□□ -0.21
LTBR-214ENST00000545445 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
LTBR-214ENST00000545445 VWA5AO00534 786 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 IFNAR1P17181 557 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 CDC27P30260 824 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 ADD1P35611 737 aaKnown RBP13.7□□□□□ -0.22
LTBR-214ENST00000545445 SLC16A2P36021 539 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 ADCYAP1R1P41586 468 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 OAZ1P54368 228 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 STK3Q13188 491 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 GRIN2CQ14957 1233 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 SNX17Q15036 470 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 RASGRP2Q7LDG7 609 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 RAB11FIP4Q86YS3 637 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 HSCBQ8IWL3 235 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 ADGRF4Q8IZF3 695 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 ARRDC4Q8NCT1 418 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 FERMT2Q96AC1 680 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 UBA5Q9GZZ9 404 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 SLC38A10Q9HBR0 1119 aa13.7□□□□□ -0.22
LTBR-214ENST00000545445 TMEM265A0A087WTH1 108 aa13.69□□□□□ -0.22
LTBR-214ENST00000545445 ATP2A1O14983 1001 aa13.69□□□□□ -0.22
LTBR-214ENST00000545445 IGHA2P01877 340 aa13.69□□□□□ -0.22
LTBR-214ENST00000545445 ITGB8P26012 769 aa13.69□□□□□ -0.22
LTBR-214ENST00000545445 AKAP17AQ02040 695 aaKnown RBP13.69□□□□□ -0.22
LTBR-214ENST00000545445 SCRN1Q12765 414 aa13.69□□□□□ -0.22
LTBR-214ENST00000545445 TRIM22Q8IYM9 498 aa13.69□□□□□ -0.22
LTBR-214ENST00000545445 SRBD1Q8N5C6 995 aaKnown RBP13.69□□□□□ -0.22
LTBR-214ENST00000545445 ATG4CQ96DT6 458 aa13.69□□□□□ -0.22
LTBR-214ENST00000545445 MTMR8Q96EF0 704 aa13.69□□□□□ -0.22
LTBR-214ENST00000545445 RRP36Q96EU6 259 aaKnown RBP13.69□□□□□ -0.22
LTBR-214ENST00000545445 TMX3Q96JJ7 454 aa13.69□□□□□ -0.22
LTBR-214ENST00000545445 LLPHQ9BRT6 129 aaKnown RBP13.69□□□□□ -0.22
LTBR-214ENST00000545445 RANBP17Q9H2T7 1088 aaKnown RBP13.69□□□□□ -0.22
LTBR-214ENST00000545445 JMJD4Q9H9V9 463 aa13.69□□□□□ -0.22
LTBR-214ENST00000545445 SEC63Q9UGP8 760 aaKnown RBP13.69□□□□□ -0.22
LTBR-214ENST00000545445 K7ELQ4 463 aaPredicted RBP13.68□□□□□ -0.22
LTBR-214ENST00000545445 CYTH3O43739 400 aa13.68□□□□□ -0.22
LTBR-214ENST00000545445 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
LTBR-214ENST00000545445 CD2BP2O95400 341 aaKnown RBP13.68□□□□□ -0.22
LTBR-214ENST00000545445 COPB2P35606 906 aa13.68□□□□□ -0.22
LTBR-214ENST00000545445 TLE2Q04725 743 aa13.68□□□□□ -0.22
LTBR-214ENST00000545445 FUT2Q10981 343 aa13.68□□□□□ -0.22
LTBR-214ENST00000545445 NTRK3Q16288 839 aa13.68□□□□□ -0.22
LTBR-214ENST00000545445 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
LTBR-214ENST00000545445 RNF26Q9BY78 433 aaPredicted RBP13.68□□□□□ -0.22
LTBR-214ENST00000545445 NCOA5Q9HCD5 579 aaKnown RBP13.68□□□□□ -0.22
LTBR-214ENST00000545445 RLFQ13129 1914 aa13.68□□□□□ -0.22
LTBR-214ENST00000545445 PNMA6FA0A0J9YX94 578 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 ZBTB5O15062 677 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 SEPT4O43236 478 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 PRPF3O43395 683 aaKnown RBP13.67□□□□□ -0.22
LTBR-214ENST00000545445 LARGE1O95461 756 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 DNAJB2P25686 324 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 ADORA2AP29274 412 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
LTBR-214ENST00000545445 BECN1Q14457 450 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 LRRC41Q15345 812 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 DPP9Q86TI2 863 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 NECAB1Q8N987 351 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 REPS2Q8NFH8 660 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 TEX13BQ9BXU2 312 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
LTBR-214ENST00000545445 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
LTBR-214ENST00000545445 CNTNAP5Q8WYK1 1306 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 STK36Q9NRP7 1315 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 hCG_1984214I3L0E3 225 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 SLC25A27O95847 323 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 ICAM1P05362 532 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 PLA2G5P39877 138 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 HMGN5P82970 282 aaKnown RBP13.66□□□□□ -0.22
LTBR-214ENST00000545445 CUL4AQ13619 759 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 TMEM132BQ14DG7 1078 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 CDC37Q16543 378 aaPredicted RBP13.66□□□□□ -0.22
LTBR-214ENST00000545445 TKFCQ3LXA3 575 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 PRAMEF19Q5SWL8 479 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 OLFML2BQ68BL8 750 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
LTBR-214ENST00000545445 FAM177A1Q8N128 213 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms