RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 ARL6IP4Q66PJ3 421 aaKnown RBP6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 PIK3AP1Q6ZUJ8 805 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 RASGRP2Q7LDG7 609 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 HOMER1Q86YM7 354 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 TEX2Q8IWB9 1127 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 CKAP2LQ8IYA6 745 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 REXO1Q8N1G1 1221 aaKnown RBP6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 RNF214Q8ND24 703 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 PIBF1Q8WXW3 757 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 GMCL1Q96IK5 515 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 PIGSQ96S52 555 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 SPSB2Q99619 263 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 SLC6A16Q9GZN6 736 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 GLT8D2Q9H1C3 349 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 SH2D4AQ9H788 454 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 VEZTQ9HBM0 779 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 ARHGEF10LQ9HCE6 1279 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 GINM1Q9NU53 330 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 ANO10Q9NW15 660 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 USP25Q9UHP3 1055 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 HOOK1Q9UJC3 728 aaKnown RBP6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 DOCK1Q14185 1865 aa6.22□□□□□ -1.41
NPIPB3-214ENST00000545358 SMCO2A6NFE2 343 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 FAM196BA6NMK8 535 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 TRIM66O15016 1216 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 ZBTB5O15062 677 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 GDF11O95390 407 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 GH2P01242 217 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 VEGFAP15692 232 aaPredicted RBP6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 SSTR3P32745 418 aaPredicted RBP6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 LONP1P36776 959 aaKnown RBP6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 PRPHP41219 470 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 ADCY7P51828 1080 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 ATP2B2Q01814 1243 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 MAP3K10Q02779 954 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 TRAF1Q13077 416 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 NONOQ15233 471 aaKnown RBP eCLIP6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 ZRSR1Q15695 479 aaKnown RBP6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 ANO6Q4KMQ2 910 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 SLFN13Q68D06 897 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 KANK3Q6NY19 840 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 KRBA2Q6ZNG9 492 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 CEP57L1Q8IYX8 460 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 ADGRF4Q8IZF3 695 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 ANKLE1Q8NAG6 615 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 CLIC6Q96NY7 704 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 SDF4Q9BRK5 362 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 UBA5Q9GZZ9 404 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 NAT10Q9H0A0 1025 aaKnown RBP6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 JMJD4Q9H9V9 463 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 SPON1Q9HCB6 807 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 GOPCQ9HD26 462 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 RIC8AQ9NPQ8 531 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 KCNH3Q9ULD8 1083 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 ZBTB21Q9ULJ3 1066 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 PCDHA6Q9UN73 950 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 SLC27A5Q9Y2P5 690 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 PCDHA8Q9Y5H6 950 aa6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 BAZ2BQ9UIF8 2168 aaKnown RBP6.21□□□□□ -1.42
NPIPB3-214ENST00000545358 F5H6K3 240 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 WNT7AO00755 349 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 TLL1O43897 1013 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 NDUFB10O96000 172 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 ASNSP08243 561 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 ATP2B1P20020 1258 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 MCM7P33993 719 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 TXLNAP40222 546 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 CLK2P49760 499 aaKnown RBP6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 ZNF165P49910 485 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 GMPSP49915 693 aaPredicted RBP6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 KLRC3Q07444 240 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 ZNF174Q15697 407 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 KIF4BQ2VIQ3 1234 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 HS1BP3Q53T59 392 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 NOM1Q5C9Z4 860 aaKnown RBP6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 MCTP2Q6DN12 878 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 BTNL9Q6UXG8 535 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 KCTD1Q719H9 257 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 NEK8Q86SG6 692 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 APOBEC3FQ8IUX4 373 aaKnown RBP6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 CNNM3Q8NE01 707 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 NLGN2Q8NFZ4 835 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 RASGRP4Q8TDF6 673 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 CUL5Q93034 780 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 TRIM44Q96DX7 344 aaPredicted RBP6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 HOOK2Q96ED9 719 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 NAP1L4Q99733 375 aaKnown RBP6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 BPIFA3Q9BQP9 254 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 TMEM39BQ9GZU3 492 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 CSRNP2Q9H175 543 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 CPVLQ9H3G5 476 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 CBX8Q9HC52 389 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 PGAP2Q9UHJ9 254 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 TUBE1Q9UJT0 475 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 TMX2Q9Y320 296 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 PPP2R3BQ9Y5P8 575 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 ZNF541Q9H0D2 1346 aa6.2□□□□□ -1.42
NPIPB3-214ENST00000545358 SBF1O95248 1867 aa6.19□□□□□ -1.42
NPIPB3-214ENST00000545358 USP17L10C9JJH3 530 aa6.19□□□□□ -1.42
NPIPB3-214ENST00000545358 RNF223E7ERA6 249 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms