RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TNFAIP2Q03169 654 aa18.24■□□□□ 0.51
CCDC78-216ENST00000544996 PDE4DQ08499 809 aa18.24■□□□□ 0.51
CCDC78-216ENST00000544996 COL9A3Q14050 684 aaPredicted RBP18.24■□□□□ 0.51
CCDC78-216ENST00000544996 ADCK5Q3MIX3 580 aa18.24■□□□□ 0.51
CCDC78-216ENST00000544996 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
CCDC78-216ENST00000544996 SGMS1Q86VZ5 419 aa18.24■□□□□ 0.51
CCDC78-216ENST00000544996 C7orf61Q8IZ16 206 aa18.24■□□□□ 0.51
CCDC78-216ENST00000544996 MORC4Q8TE76 937 aa18.24■□□□□ 0.51
CCDC78-216ENST00000544996 LENG1Q96BZ8 264 aaPredicted RBP18.24■□□□□ 0.51
CCDC78-216ENST00000544996 KATNBL1Q9H079 304 aa18.24■□□□□ 0.51
CCDC78-216ENST00000544996 CYTH3O43739 400 aa18.23■□□□□ 0.51
CCDC78-216ENST00000544996 ADCYAP1R1P41586 468 aa18.23■□□□□ 0.51
CCDC78-216ENST00000544996 KCNB2Q92953 911 aa18.23■□□□□ 0.51
CCDC78-216ENST00000544996 RRP36Q96EU6 259 aaKnown RBP18.23■□□□□ 0.51
CCDC78-216ENST00000544996 SPZ1Q9BXG8 430 aa18.23■□□□□ 0.51
CCDC78-216ENST00000544996 SEC63Q9UGP8 760 aaKnown RBP18.23■□□□□ 0.51
CCDC78-216ENST00000544996 SYNRGQ9UMZ2 1314 aa18.23■□□□□ 0.51
CCDC78-216ENST00000544996 PPP1R11O60927 126 aaPredicted RBP18.22■□□□□ 0.51
CCDC78-216ENST00000544996 ADAMTS4O75173 837 aa18.22■□□□□ 0.51
CCDC78-216ENST00000544996 CFBP00751 764 aa18.22■□□□□ 0.51
CCDC78-216ENST00000544996 PSMA5P28066 241 aa18.22■□□□□ 0.51
CCDC78-216ENST00000544996 ATN1P54259 1190 aaPredicted RBP18.22■□□□□ 0.51
CCDC78-216ENST00000544996 LRRC26Q2I0M4 334 aa18.22■□□□□ 0.51
CCDC78-216ENST00000544996 IQSEC1Q6DN90 963 aa18.22■□□□□ 0.51
CCDC78-216ENST00000544996 FBXO16Q8IX29 292 aaPredicted RBP18.22■□□□□ 0.51
CCDC78-216ENST00000544996 FANCBQ8NB91 859 aa18.22■□□□□ 0.51
CCDC78-216ENST00000544996 SYTL5Q8TDW5 730 aaPredicted RBP18.22■□□□□ 0.51
CCDC78-216ENST00000544996 NSUN6Q8TEA1 469 aaKnown RBP18.22■□□□□ 0.51
CCDC78-216ENST00000544996 TBC1D5Q92609 795 aa18.22■□□□□ 0.51
CCDC78-216ENST00000544996 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
CCDC78-216ENST00000544996 TSEN34Q9BSV6 310 aaKnown RBP18.22■□□□□ 0.51
CCDC78-216ENST00000544996 MAP3K20Q9NYL2 800 aaKnown RBP18.22■□□□□ 0.51
CCDC78-216ENST00000544996 PHF24Q9UPV7 400 aa18.22■□□□□ 0.51
CCDC78-216ENST00000544996 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
CCDC78-216ENST00000544996 C6orf222P0C671 652 aaPredicted RBP18.21■□□□□ 0.51
CCDC78-216ENST00000544996 RXRAP19793 462 aa18.21■□□□□ 0.51
CCDC78-216ENST00000544996 SLC35G1Q2M3R5 365 aa18.21■□□□□ 0.51
CCDC78-216ENST00000544996 TAPT1Q6NXT6 567 aa18.21■□□□□ 0.51
CCDC78-216ENST00000544996 MICU3Q86XE3 530 aa18.21■□□□□ 0.51
CCDC78-216ENST00000544996 SAMD3Q8N6K7 520 aa18.21■□□□□ 0.51
CCDC78-216ENST00000544996 PCSK9Q8NBP7 692 aaKnown RBP18.21■□□□□ 0.51
CCDC78-216ENST00000544996 PIBF1Q8WXW3 757 aa18.21■□□□□ 0.51
CCDC78-216ENST00000544996 FERMT2Q96AC1 680 aa18.21■□□□□ 0.51
CCDC78-216ENST00000544996 TCEANC2Q96MN5 208 aa18.21■□□□□ 0.51
CCDC78-216ENST00000544996 AP5M1Q9H0R1 490 aa18.21■□□□□ 0.51
CCDC78-216ENST00000544996 SNX14Q9Y5W7 946 aa18.21■□□□□ 0.51
CCDC78-216ENST00000544996 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.2■□□□□ 0.5
CCDC78-216ENST00000544996 ADCY6O43306 1168 aa18.2■□□□□ 0.5
CCDC78-216ENST00000544996 EDNRBP24530 442 aa18.2■□□□□ 0.5
CCDC78-216ENST00000544996 HSD17B4P51659 736 aa18.2■□□□□ 0.5
CCDC78-216ENST00000544996 GJA9P57773 515 aa18.2■□□□□ 0.5
CCDC78-216ENST00000544996 APOA5Q6Q788 366 aa18.2■□□□□ 0.5
CCDC78-216ENST00000544996 BLOC1S2Q6QNY1 142 aa18.2■□□□□ 0.5
CCDC78-216ENST00000544996 SLC39A5Q6ZMH5 540 aa18.2■□□□□ 0.5
CCDC78-216ENST00000544996 KLHDC9Q8NEP7 349 aa18.2■□□□□ 0.5
CCDC78-216ENST00000544996 RMDN3Q96TC7 470 aa18.2■□□□□ 0.5
CCDC78-216ENST00000544996 UPF3AQ9H1J1 476 aaKnown RBP18.2■□□□□ 0.5
CCDC78-216ENST00000544996 PDGFCQ9NRA1 345 aa18.2■□□□□ 0.5
CCDC78-216ENST00000544996 FRMPD3Q5JV73 1810 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 MOXD2PA6NHM9 499 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 ZBTB43O43298 467 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 PLEKHA8P1O95397 391 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 SMPD1P17405 629 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 CST5P28325 142 aaPredicted RBP18.19■□□□□ 0.5
CCDC78-216ENST00000544996 ACLYP53396 1101 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 KCNA10Q16322 511 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 GNASQ5JWF2 1037 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 ARHGEF16Q5VV41 709 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 TLK2Q86UE8 772 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 RAB11FIP4Q86YS3 637 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 SRBD1Q8N5C6 995 aaKnown RBP18.19■□□□□ 0.5
CCDC78-216ENST00000544996 TAAR1Q96RJ0 339 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 IWS1Q96ST2 819 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 WDR11Q9BZH6 1224 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 RBM28Q9NW13 759 aaKnown RBP18.19■□□□□ 0.5
CCDC78-216ENST00000544996 COL20A1Q9P218 1284 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 GNEQ9Y223 722 aaKnown RBP18.19■□□□□ 0.5
CCDC78-216ENST00000544996 Q9Y3F1 56 aa18.19■□□□□ 0.5
CCDC78-216ENST00000544996 A0A1W2PQ45 241 aaPredicted RBP18.18■□□□□ 0.5
CCDC78-216ENST00000544996 A0A1W2PQY0 241 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 GCOM1H8Y6P7 765 aaPredicted RBP18.18■□□□□ 0.5
CCDC78-216ENST00000544996 OPLAHO14841 1288 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 POLR2MP0CAP2 368 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 RTP1P59025 263 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 GHRHRQ02643 423 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 STXBP2Q15833 593 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 DUSP28Q4G0W2 176 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 CMTR1Q8N1G2 835 aaKnown RBP18.18■□□□□ 0.5
CCDC78-216ENST00000544996 SCFD2Q8WU76 684 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 GLT1D1Q96MS3 346 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 USP26Q9BXU7 913 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 BRPF3Q9ULD4 1205 aa18.18■□□□□ 0.5
CCDC78-216ENST00000544996 NAP1L2Q9ULW6 460 aaPredicted RBP18.18■□□□□ 0.5
CCDC78-216ENST00000544996 SMCHD1A6NHR9 2005 aa18.17■□□□□ 0.5
CCDC78-216ENST00000544996 KLF18A0A0U1RQI7 1052 aa18.17■□□□□ 0.5
CCDC78-216ENST00000544996 RBM47A0AV96 593 aaKnown RBP18.17■□□□□ 0.5
CCDC78-216ENST00000544996 MYADML2A6NDP7 307 aa18.17■□□□□ 0.5
CCDC78-216ENST00000544996 DYNC1LI2O43237 492 aaPredicted RBP18.17■□□□□ 0.5
CCDC78-216ENST00000544996 ZEB2O60315 1214 aa18.17■□□□□ 0.5
CCDC78-216ENST00000544996 EIF5BO60841 1220 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms