RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 MAF1Q9H063 256 aa19.49■□□□□ 0.71
PDCD2-213ENST00000544866 SNAI1O95863 264 aaPredicted RBP19.48■□□□□ 0.71
PDCD2-213ENST00000544866 CALML3P27482 149 aa19.48■□□□□ 0.71
PDCD2-213ENST00000544866 ADD1P35611 737 aaKnown RBP19.48■□□□□ 0.71
PDCD2-213ENST00000544866 GHRHRQ02643 423 aa19.48■□□□□ 0.71
PDCD2-213ENST00000544866 SHISA4Q96DD7 197 aa19.48■□□□□ 0.71
PDCD2-213ENST00000544866 DEFB118Q96PH6 123 aa19.48■□□□□ 0.71
PDCD2-213ENST00000544866 KIF2CQ99661 725 aa19.48■□□□□ 0.71
PDCD2-213ENST00000544866 LARP6Q9BRS8 491 aaKnown RBP19.48■□□□□ 0.71
PDCD2-213ENST00000544866 C22orf23Q9BZE7 217 aa19.48■□□□□ 0.71
PDCD2-213ENST00000544866 NRBP1Q9UHY1 535 aa19.48■□□□□ 0.71
PDCD2-213ENST00000544866 hCG_1642624A0A1W2PR95 340 aa19.47■□□□□ 0.71
PDCD2-213ENST00000544866 GJA8P48165 433 aa19.47■□□□□ 0.71
PDCD2-213ENST00000544866 TRAF1Q13077 416 aa19.47■□□□□ 0.71
PDCD2-213ENST00000544866 PRAMEF19Q5SWL8 479 aa19.47■□□□□ 0.71
PDCD2-213ENST00000544866 ARMCX2Q7L311 632 aa19.47■□□□□ 0.71
PDCD2-213ENST00000544866 MCF2L2Q86YR7 1114 aa19.47■□□□□ 0.71
PDCD2-213ENST00000544866 U2AF1L4Q8WU68 220 aaKnown RBP19.47■□□□□ 0.71
PDCD2-213ENST00000544866 ZNF274Q96GC6 653 aaPredicted RBP19.47■□□□□ 0.71
PDCD2-213ENST00000544866 COL20A1Q9P218 1284 aa19.47■□□□□ 0.71
PDCD2-213ENST00000544866 SEC63Q9UGP8 760 aaKnown RBP19.47■□□□□ 0.71
PDCD2-213ENST00000544866 CCDC196A0A1B0GTZ2 297 aa19.46■□□□□ 0.71
PDCD2-213ENST00000544866 ZNF865P0CJ78 1059 aaPredicted RBP19.46■□□□□ 0.71
PDCD2-213ENST00000544866 EN2P19622 333 aaPredicted RBP19.46■□□□□ 0.71
PDCD2-213ENST00000544866 RBM25P49756 843 aaKnown RBP19.46■□□□□ 0.71
PDCD2-213ENST00000544866 HSD17B4P51659 736 aa19.46■□□□□ 0.71
PDCD2-213ENST00000544866 AK2P54819 239 aa19.46■□□□□ 0.71
PDCD2-213ENST00000544866 NTRK3Q16288 839 aa19.46■□□□□ 0.71
PDCD2-213ENST00000544866 SYTL5Q8TDW5 730 aaPredicted RBP19.46■□□□□ 0.71
PDCD2-213ENST00000544866 CRISPLD2Q9H0B8 497 aa19.46■□□□□ 0.71
PDCD2-213ENST00000544866 NCOA5Q9HCD5 579 aaKnown RBP19.46■□□□□ 0.71
PDCD2-213ENST00000544866 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.46■□□□□ 0.71
PDCD2-213ENST00000544866 DDX49Q9Y6V7 483 aaKnown RBP19.46■□□□□ 0.71
PDCD2-213ENST00000544866 DNAH12Q6ZR08 3092 aa19.45■□□□□ 0.7
PDCD2-213ENST00000544866 ASB14A6NK59 587 aa19.45■□□□□ 0.7
PDCD2-213ENST00000544866 SGPL1O95470 568 aa19.45■□□□□ 0.7
PDCD2-213ENST00000544866 ALDH5A1P51649 535 aaPredicted RBP19.45■□□□□ 0.7
PDCD2-213ENST00000544866 NEK4P51957 841 aa19.45■□□□□ 0.7
PDCD2-213ENST00000544866 MORC4Q8TE76 937 aa19.45■□□□□ 0.7
PDCD2-213ENST00000544866 KATNBL1Q9H079 304 aa19.45■□□□□ 0.7
PDCD2-213ENST00000544866 ADD3Q9UEY8 706 aaKnown RBP19.45■□□□□ 0.7
PDCD2-213ENST00000544866 TPCN1Q9ULQ1 816 aa19.45■□□□□ 0.7
PDCD2-213ENST00000544866 LOC102724159A0A0B4J2E5 919 aa19.44■□□□□ 0.7
PDCD2-213ENST00000544866 CFBP00751 764 aa19.44■□□□□ 0.7
PDCD2-213ENST00000544866 RGS19P49795 217 aa19.44■□□□□ 0.7
PDCD2-213ENST00000544866 CCT2P78371 535 aaKnown RBP19.44■□□□□ 0.7
PDCD2-213ENST00000544866 PWP2Q15269 919 aaKnown RBP19.44■□□□□ 0.7
PDCD2-213ENST00000544866 LHX8Q68G74 356 aa19.44■□□□□ 0.7
PDCD2-213ENST00000544866 V9GY48 417 aaPredicted RBP19.44■□□□□ 0.7
PDCD2-213ENST00000544866 KIAA1217Q5T5P2 1943 aa19.44■□□□□ 0.7
PDCD2-213ENST00000544866 SEPT4O43236 478 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 EDNRBP24530 442 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 CNGA1P29973 690 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 ANKRD1Q15327 319 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 WWC2Q6AWC2 1192 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 SAMD3Q8N6K7 520 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 DNERQ8NFT8 737 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 GPKOWQ92917 476 aaPredicted RBP eCLIP19.43■□□□□ 0.71e-6■□□□□ 11.3
PDCD2-213ENST00000544866 TAAR1Q96RJ0 339 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 BACH2Q9BYV9 841 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 ABHD16BQ9H3Z7 469 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 MAP3K20Q9NYL2 800 aaKnown RBP19.43■□□□□ 0.7
PDCD2-213ENST00000544866 DDX20Q9UHI6 824 aaKnown RBP19.43■□□□□ 0.7
PDCD2-213ENST00000544866 CNPY2Q9Y2B0 182 aa19.43■□□□□ 0.7
PDCD2-213ENST00000544866 PDE4DIPQ5VU43 2346 aa19.42■□□□□ 0.7
PDCD2-213ENST00000544866 IFNAR1P17181 557 aa19.42■□□□□ 0.7
PDCD2-213ENST00000544866 STK3Q13188 491 aa19.42■□□□□ 0.7
PDCD2-213ENST00000544866 ACVR2BQ13705 512 aa19.42■□□□□ 0.7
PDCD2-213ENST00000544866 HEATR3Q7Z4Q2 680 aa19.42■□□□□ 0.7
PDCD2-213ENST00000544866 ZHX1Q9UKY1 873 aaPredicted RBP19.42■□□□□ 0.7
PDCD2-213ENST00000544866 OGDHLQ9ULD0 1010 aa19.42■□□□□ 0.7
PDCD2-213ENST00000544866 GCOM1H8Y6P7 765 aaPredicted RBP19.41■□□□□ 0.7
PDCD2-213ENST00000544866 PRPF3O43395 683 aaKnown RBP19.41■□□□□ 0.7
PDCD2-213ENST00000544866 MSCO60682 206 aa19.41■□□□□ 0.7
PDCD2-213ENST00000544866 PFKFB2O60825 505 aa19.41■□□□□ 0.7
PDCD2-213ENST00000544866 POLR2MP0CAP2 368 aa19.41■□□□□ 0.7
PDCD2-213ENST00000544866 HOXA13P31271 388 aaPredicted RBP19.41■□□□□ 0.7
PDCD2-213ENST00000544866 PKN1Q16512 942 aa19.41■□□□□ 0.7
PDCD2-213ENST00000544866 TYW1BQ6NUM6 668 aa19.41■□□□□ 0.7
PDCD2-213ENST00000544866 PHKBQ93100 1093 aa19.41■□□□□ 0.7
PDCD2-213ENST00000544866 UPF2Q9HAU5 1272 aaKnown RBP19.41■□□□□ 0.7
PDCD2-213ENST00000544866 hCG_1984214I3L0E3 225 aa19.4■□□□□ 0.7
PDCD2-213ENST00000544866 STXBP3O00186 592 aa19.4■□□□□ 0.7
PDCD2-213ENST00000544866 CAPN2P17655 700 aa19.4■□□□□ 0.7
PDCD2-213ENST00000544866 MNX1P50219 401 aaPredicted RBP19.4■□□□□ 0.7
PDCD2-213ENST00000544866 SCRN1Q12765 414 aa19.4■□□□□ 0.7
PDCD2-213ENST00000544866 PFKFB3Q16875 520 aaPredicted RBP19.4■□□□□ 0.7
PDCD2-213ENST00000544866 ANO1Q5XXA6 986 aa19.4■□□□□ 0.7
PDCD2-213ENST00000544866 ZNF713Q8N859 430 aaPredicted RBP19.4■□□□□ 0.7
PDCD2-213ENST00000544866 NSUN6Q8TEA1 469 aaKnown RBP19.4■□□□□ 0.7
PDCD2-213ENST00000544866 TBC1D32Q96NH3 1257 aa19.4■□□□□ 0.7
PDCD2-213ENST00000544866 RMDN3Q96TC7 470 aa19.4■□□□□ 0.7
PDCD2-213ENST00000544866 RNF26Q9BY78 433 aaPredicted RBP19.4■□□□□ 0.7
PDCD2-213ENST00000544866 PIK3CDO00329 1044 aa19.39■□□□□ 0.69
PDCD2-213ENST00000544866 MEIS2O14770 477 aa19.39■□□□□ 0.69
PDCD2-213ENST00000544866 ADCY6O43306 1168 aa19.39■□□□□ 0.69
PDCD2-213ENST00000544866 PPFIA3O75145 1194 aa19.39■□□□□ 0.69
PDCD2-213ENST00000544866 LARGE1O95461 756 aa19.39■□□□□ 0.69
PDCD2-213ENST00000544866 TFRCP02786 760 aaKnown RBP19.39■□□□□ 0.69
PDCD2-213ENST00000544866 AKR1A1P14550 325 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms