RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	KCNMB1	Q16558	191 aa		7.89	□□□□□ -1.15
LEMD3-205	ENST00000544506	INF2	Q27J81	1249 aa		7.89	□□□□□ -1.15
LEMD3-205	ENST00000544506	NUP43	Q8NFH3	380 aa		7.89	□□□□□ -1.15
LEMD3-205	ENST00000544506	SH3TC2	Q8TF17	1288 aa		7.89	□□□□□ -1.15
LEMD3-205	ENST00000544506	DIO2	Q92813	273 aa		7.89	□□□□□ -1.15
LEMD3-205	ENST00000544506	KRTAP4-6	Q9BYQ5	205 aa		7.89	□□□□□ -1.15
LEMD3-205	ENST00000544506	C7orf72	A4D263	438 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	PRKCA	P17252	672 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	KCNAB2	Q13303	367 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	SNX17	Q15036	470 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	TESK1	Q15569	626 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	NTRK3	Q16288	839 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	USP53	Q70EK8	1073 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	NOP9	Q86U38	636 aa	Known RBP	7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	JAZF1	Q86VZ6	243 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	SCUBE1	Q8IWY4	988 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	SIRT2	Q8IXJ6	389 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	ZSWIM2	Q8NEG5	633 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	FAM168A	Q92567	244 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	SLC26A8	Q96RN1	970 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	ACSL6	Q9UKU0	697 aa		7.88	□□□□□ -1.15
LEMD3-205	ENST00000544506	BLACE	A4D250	179 aa		7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	GLI1	P08151	1106 aa		7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	MSL3P1	P0C860	447 aa		7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	LTBR	P36941	435 aa		7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	SUMO1	P63165	101 aa	Known RBP	7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	MVK	Q03426	396 aa		7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	SQSTM1	Q13501	440 aa		7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	TMEM67	Q5HYA8	995 aa		7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	IQCE	Q6IPM2	695 aa		7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	KISS1R	Q969F8	398 aa	Predicted RBP	7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	ASIC4	Q96FT7	647 aa		7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	RNPC3	Q96LT9	517 aa	Known RBP	7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	IPO9	Q96P70	1041 aa	Known RBP	7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	DHRS4	Q9BTZ2	278 aa		7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	MRPS23	Q9Y3D9	190 aa	Known RBP	7.87	□□□□□ -1.15
LEMD3-205	ENST00000544506	CARMIL2	Q6F5E8	1435 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506		A0A1W2PQ27	194 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506		A0A1W2PQ64	194 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506		A0A1W2PQC6	194 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506		A0A1W2PQD8	194 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506	NPHS1	O60500	1241 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506	LCP1	P13796	627 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506	CORO7	P57737	925 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506	CRTAC1	Q9NQ79	661 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506	GULP1	Q9UBP9	304 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506	YBX2	Q9Y2T7	364 aa	Known RBP	7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506	NPFFR2	Q9Y5X5	522 aa		7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506	MRPL42	Q9Y6G3	142 aa	Known RBP	7.86	□□□□□ -1.15
LEMD3-205	ENST00000544506	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	7.85	□□□□□ -1.15
LEMD3-205	ENST00000544506	CYP4F8	P98187	520 aa		7.85	□□□□□ -1.15
LEMD3-205	ENST00000544506	MCTP1	Q6DN14	999 aa		7.85	□□□□□ -1.15
LEMD3-205	ENST00000544506	GIMAP6	Q6P9H5	292 aa		7.85	□□□□□ -1.15
LEMD3-205	ENST00000544506	RCBTB1	Q8NDN9	531 aa		7.85	□□□□□ -1.15
LEMD3-205	ENST00000544506	NLGN2	Q8NFZ4	835 aa		7.85	□□□□□ -1.15
LEMD3-205	ENST00000544506	INTS4	Q96HW7	963 aa	Known RBP	7.85	□□□□□ -1.15
LEMD3-205	ENST00000544506	RWDD3	Q9Y3V2	267 aa		7.85	□□□□□ -1.15
LEMD3-205	ENST00000544506	ESYT3	A0FGR9	886 aa		7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	PPP1R11	O60927	126 aa	Predicted RBP	7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	C6orf222	P0C671	652 aa	Predicted RBP	7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	PNLIP	P16233	465 aa		7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	TACR1	P25103	407 aa		7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	KCNT2	Q6UVM3	1135 aa		7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	DCAF4	Q8WV16	495 aa		7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	DPF3	Q92784	378 aa		7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	PHF20	Q9BVI0	1012 aa		7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	PDLIM7	Q9NR12	457 aa		7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	TMEM260	Q9NX78	707 aa		7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	FBXL7	Q9UJT9	491 aa		7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.84	□□□□□ -1.15
LEMD3-205	ENST00000544506	ZNF503-AS2	A6NEH8	195 aa		7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	MSC	O60682	206 aa		7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	STYK1	Q6J9G0	422 aa		7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	MTA3	Q9BTC8	594 aa		7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	SLC6A17	Q9H1V8	727 aa		7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	TNFRSF12A	Q9NP84	129 aa		7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	GPR27	Q9NS67	375 aa		7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	BTG4	Q9NY30	223 aa		7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	FBLN5	Q9UBX5	448 aa		7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	TBX22	Q9Y458	520 aa		7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	TIMM13	Q9Y5L4	95 aa	Predicted RBP	7.83	□□□□□ -1.16
LEMD3-205	ENST00000544506	CCDC163	A0A0D9SF12	145 aa		7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	MYO1B	O43795	1136 aa		7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	ARL4A	P40617	200 aa		7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	RPL11	P62913	178 aa	Known RBP	7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	ADGRF1	Q5T601	910 aa		7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	RSPO2	Q6UXX9	243 aa	Predicted RBP	7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	ASXL2	Q76L83	1435 aa		7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	NLRP10	Q86W26	655 aa		7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	LZTR1	Q8N653	840 aa		7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	LIN37	Q96GY3	246 aa	Predicted RBP	7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	MARCH2	Q9P0N8	246 aa		7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	TRAF6	Q9Y4K3	522 aa		7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506	PCDHA2	Q9Y5H9	948 aa		7.82	□□□□□ -1.16
LEMD3-205	ENST00000544506		A0A1W2PQJ5	194 aa		7.81	□□□□□ -1.16
LEMD3-205	ENST00000544506	SDHB	P21912	280 aa		7.81	□□□□□ -1.16
LEMD3-205	ENST00000544506	BCL6	P41182	706 aa		7.81	□□□□□ -1.16
LEMD3-205	ENST00000544506	ERVFRD-1	P60508	538 aa		7.81	□□□□□ -1.16
LEMD3-205	ENST00000544506	MPZL3	Q6UWV2	235 aa		7.81	□□□□□ -1.16

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