RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 ZMYND12Q9H0C1 365 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 FAM207AQ9NSI2 230 aaPredicted RBP17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 EXOC1Q9NV70 894 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 LRWD1Q9UFC0 647 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 EDIL3O43854 480 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 DNA2P51530 1060 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 SYCP1Q15431 976 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 CRY2Q49AN0 593 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 TAF3Q5VWG9 929 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 CDC42EP5Q6NZY7 148 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 SMCR8Q8TEV9 937 aaPredicted RBP17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 FGFBP2Q9BYJ0 223 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 TRIM9Q9C026 710 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 IL1R1P14778 569 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 CALCRLQ16602 461 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 COL23A1Q86Y22 540 aaPredicted RBP17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 NELFCDQ8IXH7 590 aa17.68■□□□□ 0.42
SNRNP70-203ENST00000544278 RREB1Q92766 1687 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 CCDC88AQ3V6T2 1871 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 KIAA1551Q9HCM1 1747 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 FEZ1Q99689 392 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 DUSP9Q99956 384 aaKnown RBP17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 PHLPP2Q6ZVD8 1323 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 MYMKA6NI61 221 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 TRIM21P19474 475 aaKnown RBP17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 ARL6IP4Q66PJ3 421 aaKnown RBP17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 ANKRD13CQ8N6S4 541 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 SNX29Q8TEQ0 813 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 CDK5RAP3Q96JB5 506 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 PLEKHA4Q9H4M7 779 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 SERPINB13Q9UIV8 391 aa17.67■□□□□ 0.42
SNRNP70-203ENST00000544278 DDTLA6NHG4 134 aaPredicted RBP17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 EPHB6O15197 1021 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 TPM1P09493 284 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 FKBP15Q5T1M5 1219 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 KIAA0895Q8NCT3 520 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 RGS22Q8NE09 1264 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 ANKRD20A12PQ8NF67 263 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 TUBGCP2Q9BSJ2 902 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 JMJD4Q9H9V9 463 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 PSMA7O14818 248 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 ZMYND10O75800 440 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 TBC1D8BQ0IIM8 1120 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 TERF2Q15554 542 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 ELOA2Q8IYF1 753 aaPredicted RBP17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 CNOT6LQ96LI5 555 aaKnown RBP17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 CRACR2AQ9BSW2 395 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 MACROD2A1Z1Q3 448 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 KIF5CO60282 957 aa17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 ZYXQ15942 572 aaKnown RBP17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 CCDC84Q86UT8 332 aaPredicted RBP17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 MAGEC2Q9UBF1 373 aaPredicted RBP17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 REXO2Q9Y3B8 237 aaKnown RBP17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 PDS5AQ29RF7 1337 aaKnown RBP17.66■□□□□ 0.42
SNRNP70-203ENST00000544278 MEIS1O00470 390 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 BBOX1O75936 387 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 ADCY7P51828 1080 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 GRB10Q13322 594 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 KCND1Q9NSA2 647 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 KBTBD4Q9NVX7 518 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 LIMA1Q9UHB6 759 aaKnown RBP17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 SASH3O75995 380 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 GNA11P29992 359 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 SHMT1P34896 483 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 UBXN2AP68543 259 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 KRT25Q7Z3Z0 450 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 DNAAF5Q86Y56 855 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 MB21D1Q8N884 522 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 CTAGE1Q96RT6 745 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 PARD6BQ9BYG5 372 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 MRFAP1Q9Y605 127 aa17.65■□□□□ 0.42
SNRNP70-203ENST00000544278 RCCD1A6NED2 376 aa17.64■□□□□ 0.42
SNRNP70-203ENST00000544278 E9PMD0 336 aa17.64■□□□□ 0.42
SNRNP70-203ENST00000544278 TTI2Q6NXR4 508 aa17.64■□□□□ 0.42
SNRNP70-203ENST00000544278 PNMA5Q96PV4 448 aa17.64■□□□□ 0.42
SNRNP70-203ENST00000544278 PANX2Q96RD6 677 aa17.64■□□□□ 0.42
SNRNP70-203ENST00000544278 SPZ1Q9BXG8 430 aa17.64■□□□□ 0.42
SNRNP70-203ENST00000544278 TANGO6Q9C0B7 1094 aa17.64■□□□□ 0.42
SNRNP70-203ENST00000544278 DNAJC18Q9H819 358 aa17.64■□□□□ 0.42
SNRNP70-203ENST00000544278 ZNF287Q9HBT7 754 aa17.64■□□□□ 0.42
SNRNP70-203ENST00000544278 CCP110O43303 1012 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 CAPN2P17655 700 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 MAP3K9P80192 1104 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 SEPT2Q15019 361 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 PTPROQ16827 1216 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 CNGA4Q8IV77 575 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 ANKS1AQ92625 1134 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 NOC4LQ9BVI4 516 aaKnown RBP17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 SEMA6BQ9H3T3 888 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 BLOC1S4Q9NUP1 217 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 RMND1Q9NWS8 449 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 CCDC66A2RUB6 948 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 HOXA13P31271 388 aaPredicted RBP17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 TMED8Q6PL24 325 aaPredicted RBP17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 TMCO3Q6UWJ1 677 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 KRT27Q7Z3Y8 459 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 MMRN2Q9H8L6 949 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 SH3GLB2Q9NR46 395 aa17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 LUC7L2Q9Y383 392 aaKnown RBP17.64■□□□□ 0.41
SNRNP70-203ENST00000544278 APBA3O96018 575 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms