RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 ACVR2BQ13705 512 aa25.25■■□□□ 1.63
OTUB1-212ENST00000543988 RTN1Q16799 776 aa25.25■■□□□ 1.63
OTUB1-212ENST00000543988 MCF2L2Q86YR7 1114 aa25.25■■□□□ 1.63
OTUB1-212ENST00000543988 RRP36Q96EU6 259 aaKnown RBP25.25■■□□□ 1.63
OTUB1-212ENST00000543988 PAWRQ96IZ0 340 aaKnown RBP25.25■■□□□ 1.63
OTUB1-212ENST00000543988 AGXT2Q9BYV1 514 aa25.25■■□□□ 1.63
OTUB1-212ENST00000543988 UPF3BQ9BZI7 483 aaKnown RBP25.25■■□□□ 1.63
OTUB1-212ENST00000543988 TM6SF1Q9BZW5 370 aa25.25■■□□□ 1.63
OTUB1-212ENST00000543988 ADD3Q9UEY8 706 aaKnown RBP25.25■■□□□ 1.63
OTUB1-212ENST00000543988 NAP1L2Q9ULW6 460 aaPredicted RBP25.25■■□□□ 1.63
OTUB1-212ENST00000543988 LCTP09848 1927 aa25.25■■□□□ 1.63
OTUB1-212ENST00000543988 TNRC18O15417 2968 aaPredicted RBP25.25■■□□□ 1.63
OTUB1-212ENST00000543988 SEC24BO95487 1268 aa25.24■■□□□ 1.63
OTUB1-212ENST00000543988 RUFY3Q7L099 469 aa25.24■■□□□ 1.63
OTUB1-212ENST00000543988 FBXL16Q8N461 479 aa25.24■■□□□ 1.63
OTUB1-212ENST00000543988 SYTL5Q8TDW5 730 aaPredicted RBP25.24■■□□□ 1.63
OTUB1-212ENST00000543988 ABHD16BQ9H3Z7 469 aa25.24■■□□□ 1.63
OTUB1-212ENST00000543988 COL20A1Q9P218 1284 aa25.24■■□□□ 1.63
OTUB1-212ENST00000543988 CYP46A1Q9Y6A2 500 aa25.24■■□□□ 1.63
OTUB1-212ENST00000543988 AKR1A1P14550 325 aa25.23■■□□□ 1.63
OTUB1-212ENST00000543988 RCAN1P53805 252 aa25.23■■□□□ 1.63
OTUB1-212ENST00000543988 CCDC82Q8N4S0 544 aa25.23■■□□□ 1.63
OTUB1-212ENST00000543988 MORC4Q8TE76 937 aa25.23■■□□□ 1.63
OTUB1-212ENST00000543988 MAF1Q9H063 256 aa25.23■■□□□ 1.63
OTUB1-212ENST00000543988 RBM28Q9NW13 759 aaKnown RBP25.23■■□□□ 1.63
OTUB1-212ENST00000543988 SEC63Q9UGP8 760 aaKnown RBP25.23■■□□□ 1.63
OTUB1-212ENST00000543988 hCG_1642624A0A1W2PR95 340 aa25.22■■□□□ 1.63
OTUB1-212ENST00000543988 RARBP10826 455 aa25.22■■□□□ 1.63
OTUB1-212ENST00000543988 TRAF1Q13077 416 aa25.22■■□□□ 1.63
OTUB1-212ENST00000543988 FAM217BQ9NTX9 383 aaPredicted RBP25.22■■□□□ 1.63
OTUB1-212ENST00000543988 FAM184BQ9ULE4 1060 aa25.22■■□□□ 1.63
OTUB1-212ENST00000543988 LRRC37A2A6NM11 1700 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 CNTNAP5Q8WYK1 1306 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 ADCY6O43306 1168 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 EIF5BO60841 1220 aaKnown RBP25.21■■□□□ 1.63
OTUB1-212ENST00000543988 CFBP00751 764 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 HSD17B4P51659 736 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 GHRHRQ02643 423 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 FUT2Q10981 343 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 CCDC144BQ3MJ40 725 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 C8orf34Q49A92 452 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 NECAB2Q7Z6G3 386 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 FBXO16Q8IX29 292 aaPredicted RBP25.21■■□□□ 1.63
OTUB1-212ENST00000543988 DNERQ8NFT8 737 aa25.21■■□□□ 1.63
OTUB1-212ENST00000543988 BAZ2BQ9UIF8 2168 aaKnown RBP25.21■■□□□ 1.63
OTUB1-212ENST00000543988 LOC102724159A0A0B4J2E5 919 aa25.2■■□□□ 1.62
OTUB1-212ENST00000543988 EDNRBP24530 442 aa25.2■■□□□ 1.62
OTUB1-212ENST00000543988 CDC27P30260 824 aa25.2■■□□□ 1.62
OTUB1-212ENST00000543988 METAP2P50579 478 aaKnown RBP eCLIP25.2■■□□□ 1.62
OTUB1-212ENST00000543988 ANAPC15P60006 121 aa25.2■■□□□ 1.62
OTUB1-212ENST00000543988 TOB2Q14106 344 aaPredicted RBP25.2■■□□□ 1.62
OTUB1-212ENST00000543988 PWP2Q15269 919 aaKnown RBP25.2■■□□□ 1.62
OTUB1-212ENST00000543988 EEPD1Q7L9B9 569 aa25.2■■□□□ 1.62
OTUB1-212ENST00000543988 XPNPEP3Q9NQH7 507 aa25.2■■□□□ 1.62
OTUB1-212ENST00000543988 FRMPD3Q5JV73 1810 aa25.2■■□□□ 1.62
OTUB1-212ENST00000543988 NID2Q14112 1375 aa25.19■■□□□ 1.62
OTUB1-212ENST00000543988 PDE4DIPQ5VU43 2346 aa25.19■■□□□ 1.62
OTUB1-212ENST00000543988 COL6A1P12109 1028 aa25.19■■□□□ 1.62
OTUB1-212ENST00000543988 HOXA13P31271 388 aaPredicted RBP25.19■■□□□ 1.62
OTUB1-212ENST00000543988 GJC2Q5T442 439 aaPredicted RBP25.19■■□□□ 1.62
OTUB1-212ENST00000543988 TAAR1Q96RJ0 339 aa25.19■■□□□ 1.62
OTUB1-212ENST00000543988 C11orf49Q9H6J7 331 aa25.19■■□□□ 1.62
OTUB1-212ENST00000543988 VTA1Q9NP79 307 aa25.19■■□□□ 1.62
OTUB1-212ENST00000543988 DNM1LO00429 736 aa25.18■■□□□ 1.62
OTUB1-212ENST00000543988 PGK1P00558 417 aa25.18■■□□□ 1.62
OTUB1-212ENST00000543988 MYCNP04198 464 aaPredicted RBP25.18■■□□□ 1.62
OTUB1-212ENST00000543988 PDE4DQ08499 809 aa25.18■■□□□ 1.62
OTUB1-212ENST00000543988 PDGFCQ9NRA1 345 aa25.18■■□□□ 1.62
OTUB1-212ENST00000543988 MCM3APO60318 1980 aa25.18■■□□□ 1.62
OTUB1-212ENST00000543988 SYNRGQ9UMZ2 1314 aa25.17■■□□□ 1.62
OTUB1-212ENST00000543988 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.17■■□□□ 1.62
OTUB1-212ENST00000543988 ADD1P35611 737 aaKnown RBP25.17■■□□□ 1.62
OTUB1-212ENST00000543988 ADCYAP1R1P41586 468 aa25.17■■□□□ 1.62
OTUB1-212ENST00000543988 EVCP57679 992 aa25.17■■□□□ 1.62
OTUB1-212ENST00000543988 LRRC41Q15345 812 aa25.17■■□□□ 1.62
OTUB1-212ENST00000543988 TAPT1Q6NXT6 567 aa25.17■■□□□ 1.62
OTUB1-212ENST00000543988 ARRDC4Q8NCT1 418 aa25.17■■□□□ 1.62
OTUB1-212ENST00000543988 RMDN3Q96TC7 470 aa25.17■■□□□ 1.62
OTUB1-212ENST00000543988 PDRG1Q9NUG6 133 aa25.17■■□□□ 1.62
OTUB1-212ENST00000543988 GCOM1H8Y6P7 765 aaPredicted RBP25.16■■□□□ 1.62
OTUB1-212ENST00000543988 ADAMTS4O75173 837 aa25.16■■□□□ 1.62
OTUB1-212ENST00000543988 POLR2MP0CAP2 368 aa25.16■■□□□ 1.62
OTUB1-212ENST00000543988 NSUN6Q8TEA1 469 aaKnown RBP25.16■■□□□ 1.62
OTUB1-212ENST00000543988 IL17RAQ96F46 866 aa25.16■■□□□ 1.62
OTUB1-212ENST00000543988 MPHOSPH6Q99547 160 aaKnown RBP25.16■■□□□ 1.62
OTUB1-212ENST00000543988 HTATIP2Q9BUP3 242 aa25.16■■□□□ 1.62
OTUB1-212ENST00000543988 MYH6P13533 1939 aa25.16■■□□□ 1.62
OTUB1-212ENST00000543988 KBTBD13C9JR72 458 aa25.15■■□□□ 1.62
OTUB1-212ENST00000543988 DUSP11O75319 330 aaKnown RBP25.15■■□□□ 1.62
OTUB1-212ENST00000543988 EIF2AK2P19525 551 aaKnown RBP25.15■■□□□ 1.62
OTUB1-212ENST00000543988 PDIA3P30101 505 aaKnown RBP25.15■■□□□ 1.62
OTUB1-212ENST00000543988 TNFAIP2Q03169 654 aa25.15■■□□□ 1.62
OTUB1-212ENST00000543988 HEATR3Q7Z4Q2 680 aa25.15■■□□□ 1.62
OTUB1-212ENST00000543988 GPKOWQ92917 476 aaPredicted RBP eCLIP25.15■■□□□ 1.62
OTUB1-212ENST00000543988 LARP6Q9BRS8 491 aaKnown RBP25.15■■□□□ 1.62
OTUB1-212ENST00000543988 PXMP2Q9NR77 195 aa25.15■■□□□ 1.62
OTUB1-212ENST00000543988 CCDC196A0A1B0GTZ2 297 aa25.14■■□□□ 1.62
OTUB1-212ENST00000543988 PTGS1P23219 599 aa25.14■■□□□ 1.62
OTUB1-212ENST00000543988 PPP2R5BQ15173 497 aa25.14■■□□□ 1.62
OTUB1-212ENST00000543988 TMEM63BQ5T3F8 832 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms