RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 MTFR1Q15390 333 aa17.44■□□□□ 0.38
CD9-210ENST00000543916 ME3Q16798 604 aa17.44■□□□□ 0.38
CD9-210ENST00000543916 SLKQ9H2G2 1235 aaPredicted RBP17.44■□□□□ 0.38
CD9-210ENST00000543916 FRMPD3Q5JV73 1810 aa17.44■□□□□ 0.38
CD9-210ENST00000543916 CFBP00751 764 aa17.43■□□□□ 0.38
CD9-210ENST00000543916 UBXN2AP68543 259 aa17.43■□□□□ 0.38
CD9-210ENST00000543916 GHRHRQ02643 423 aa17.43■□□□□ 0.38
CD9-210ENST00000543916 MAP3K21Q5TCX8 1036 aa17.43■□□□□ 0.38
CD9-210ENST00000543916 WWC2Q6AWC2 1192 aa17.43■□□□□ 0.38
CD9-210ENST00000543916 HEATR3Q7Z4Q2 680 aa17.43■□□□□ 0.38
CD9-210ENST00000543916 ZNF467Q7Z7K2 595 aaPredicted RBP17.43■□□□□ 0.38
CD9-210ENST00000543916 MCF2L2Q86YR7 1114 aa17.43■□□□□ 0.38
CD9-210ENST00000543916 NECAB1Q8N987 351 aa17.43■□□□□ 0.38
CD9-210ENST00000543916 COL20A1Q9P218 1284 aa17.43■□□□□ 0.38
CD9-210ENST00000543916 DDX49Q9Y6V7 483 aaKnown RBP17.43■□□□□ 0.38
CD9-210ENST00000543916 PRPF3O43395 683 aaKnown RBP17.42■□□□□ 0.38
CD9-210ENST00000543916 DTNBO60941 627 aa17.42■□□□□ 0.38
CD9-210ENST00000543916 CCL5P13501 91 aa17.42■□□□□ 0.38
CD9-210ENST00000543916 PRKAR2AP13861 404 aaKnown RBP17.42■□□□□ 0.38
CD9-210ENST00000543916 HSD17B4P51659 736 aa17.42■□□□□ 0.38
CD9-210ENST00000543916 PKN1Q16512 942 aa17.42■□□□□ 0.38
CD9-210ENST00000543916 MFSD14CQ5VZR4 134 aa17.42■□□□□ 0.38
CD9-210ENST00000543916 TYW1BQ6NUM6 668 aa17.42■□□□□ 0.38
CD9-210ENST00000543916 TINF2Q9BSI4 451 aa17.42■□□□□ 0.38
CD9-210ENST00000543916 SLC26A6Q9BXS9 759 aa17.42■□□□□ 0.38
CD9-210ENST00000543916 RNF26Q9BY78 433 aaPredicted RBP17.42■□□□□ 0.38
CD9-210ENST00000543916 UNC93B1Q9H1C4 597 aa17.42■□□□□ 0.38
CD9-210ENST00000543916 LIMCH1Q9UPQ0 1083 aa17.42■□□□□ 0.38
CD9-210ENST00000543916 STXBP3O00186 592 aa17.41■□□□□ 0.38
CD9-210ENST00000543916 CPLX1O14810 134 aa17.41■□□□□ 0.38
CD9-210ENST00000543916 SCG2P13521 617 aa17.41■□□□□ 0.38
CD9-210ENST00000543916 ST3GAL1Q11201 340 aa17.41■□□□□ 0.38
CD9-210ENST00000543916 PFKFB3Q16875 520 aaPredicted RBP17.41■□□□□ 0.38
CD9-210ENST00000543916 MAMDC4Q6UXC1 1216 aa17.41■□□□□ 0.38
CD9-210ENST00000543916 TRPV1Q8NER1 839 aa17.41■□□□□ 0.38
CD9-210ENST00000543916 SYTL5Q8TDW5 730 aaPredicted RBP17.41■□□□□ 0.38
CD9-210ENST00000543916 GTF3C6Q969F1 213 aa17.41■□□□□ 0.38
CD9-210ENST00000543916 MAF1Q9H063 256 aa17.41■□□□□ 0.38
CD9-210ENST00000543916 SYNGAP1Q96PV0 1343 aa17.41■□□□□ 0.38
CD9-210ENST00000543916 CD2BP2O95400 341 aaKnown RBP17.4■□□□□ 0.38
CD9-210ENST00000543916 CTDNEP1O95476 244 aa17.4■□□□□ 0.38
CD9-210ENST00000543916 CYBAP13498 195 aa17.4■□□□□ 0.38
CD9-210ENST00000543916 CCND3P30281 292 aaPredicted RBP17.4■□□□□ 0.38
CD9-210ENST00000543916 HOXA13P31271 388 aaPredicted RBP17.4■□□□□ 0.38
CD9-210ENST00000543916 ALDH5A1P51649 535 aaPredicted RBP17.4■□□□□ 0.38
CD9-210ENST00000543916 PRAMEF19Q5SWL8 479 aa17.4■□□□□ 0.38
CD9-210ENST00000543916 ARMCX2Q7L311 632 aa17.4■□□□□ 0.38
CD9-210ENST00000543916 MSL3Q8N5Y2 521 aaKnown RBP17.4■□□□□ 0.38
CD9-210ENST00000543916 TAAR1Q96RJ0 339 aa17.4■□□□□ 0.38
CD9-210ENST00000543916 BARHL2Q9NY43 387 aa17.4■□□□□ 0.38
CD9-210ENST00000543916 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
CD9-210ENST00000543916 CCDC85CA6NKD9 419 aa17.39■□□□□ 0.37
CD9-210ENST00000543916 GCOM1H8Y6P7 765 aaPredicted RBP17.39■□□□□ 0.37
CD9-210ENST00000543916 hCG_1984214I3L0E3 225 aa17.39■□□□□ 0.37
CD9-210ENST00000543916 ST18O60284 1047 aa17.39■□□□□ 0.37
CD9-210ENST00000543916 SNAI1O95863 264 aaPredicted RBP17.39■□□□□ 0.37
CD9-210ENST00000543916 POLR2MP0CAP2 368 aa17.39■□□□□ 0.37
CD9-210ENST00000543916 NAPAP54920 295 aa17.39■□□□□ 0.37
CD9-210ENST00000543916 AKAP17AQ02040 695 aaKnown RBP17.39■□□□□ 0.37
CD9-210ENST00000543916 SSRP1Q08945 709 aaKnown RBP17.39■□□□□ 0.37
CD9-210ENST00000543916 PPP1R18Q6NYC8 613 aa17.39■□□□□ 0.37
CD9-210ENST00000543916 CPLX2Q6PUV4 134 aaKnown RBP17.39■□□□□ 0.37
CD9-210ENST00000543916 SAMD3Q8N6K7 520 aa17.39■□□□□ 0.37
CD9-210ENST00000543916 ZNF713Q8N859 430 aaPredicted RBP17.39■□□□□ 0.37
CD9-210ENST00000543916 SHISA4Q96DD7 197 aa17.39■□□□□ 0.37
CD9-210ENST00000543916 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.39■□□□□ 0.37
CD9-210ENST00000543916 HMX1Q9NP08 348 aaPredicted RBP17.39■□□□□ 0.37
CD9-210ENST00000543916 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.39■□□□□ 0.37
CD9-210ENST00000543916 ADD3Q9UEY8 706 aaKnown RBP17.39■□□□□ 0.37
CD9-210ENST00000543916 RPTORQ8N122 1335 aa17.39■□□□□ 0.37
CD9-210ENST00000543916 ASB14A6NK59 587 aa17.38■□□□□ 0.37
CD9-210ENST00000543916 MEIS2O14770 477 aa17.38■□□□□ 0.37
CD9-210ENST00000543916 USP17L6PQ6QN14 398 aa17.38■□□□□ 0.37
CD9-210ENST00000543916 TRIM22Q8IYM9 498 aa17.38■□□□□ 0.37
CD9-210ENST00000543916 DNERQ8NFT8 737 aa17.38■□□□□ 0.37
CD9-210ENST00000543916 MORC4Q8TE76 937 aa17.38■□□□□ 0.37
CD9-210ENST00000543916 RNF208Q9H0X6 261 aa17.38■□□□□ 0.37
CD9-210ENST00000543916 PAK6Q9NQU5 681 aaPredicted RBP17.38■□□□□ 0.37
CD9-210ENST00000543916 MAP3K20Q9NYL2 800 aaKnown RBP17.38■□□□□ 0.37
CD9-210ENST00000543916 CDKL5O76039 1030 aa17.37■□□□□ 0.37
CD9-210ENST00000543916 ZNF865P0CJ78 1059 aaPredicted RBP17.37■□□□□ 0.37
CD9-210ENST00000543916 UBE2SQ16763 222 aa17.37■□□□□ 0.37
CD9-210ENST00000543916 FCHSD1Q86WN1 690 aa17.37■□□□□ 0.37
CD9-210ENST00000543916 CCDC83Q8IWF9 413 aa17.37■□□□□ 0.37
CD9-210ENST00000543916 NSUN7Q8NE18 718 aaKnown RBP17.37■□□□□ 0.37
CD9-210ENST00000543916 ZSCAN31Q96LW9 406 aaPredicted RBP17.37■□□□□ 0.37
CD9-210ENST00000543916 RMDN3Q96TC7 470 aa17.37■□□□□ 0.37
CD9-210ENST00000543916 KATNBL1Q9H079 304 aa17.37■□□□□ 0.37
CD9-210ENST00000543916 PSTPIP2Q9H939 334 aa17.37■□□□□ 0.37
CD9-210ENST00000543916 STK36Q9NRP7 1315 aa17.37■□□□□ 0.37
CD9-210ENST00000543916 LOC102724159A0A0B4J2E5 919 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 POTEFA5A3E0 1075 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 PIK3CDO00329 1044 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 DEXIO95424 95 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 EIF2AK2P19525 551 aaKnown RBP17.36■□□□□ 0.37
CD9-210ENST00000543916 EDNRBP24530 442 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 CNGA1P29973 690 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 SOX10P56693 466 aa17.36■□□□□ 0.37
CD9-210ENST00000543916 PWP2Q15269 919 aaKnown RBP17.36■□□□□ 0.37
CD9-210ENST00000543916 IL27Q8NEV9 243 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms