RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 HOMER1Q86YM7 354 aa18.86■□□□□ 0.61
CIT-212ENST00000543239 JAKMIP1Q96N16 626 aaKnown RBP18.86■□□□□ 0.61
CIT-212ENST00000543239 PURBQ96QR8 312 aaKnown RBP18.86■□□□□ 0.61
CIT-212ENST00000543239 PCDHA1Q9Y5I3 950 aa18.86■□□□□ 0.61
CIT-212ENST00000543239 B4DLN1 442 aa18.85■□□□□ 0.61
CIT-212ENST00000543239 DUSP11O75319 330 aaKnown RBP18.85■□□□□ 0.61
CIT-212ENST00000543239 PSMA5P28066 241 aa18.85■□□□□ 0.61
CIT-212ENST00000543239 MRPL12P52815 198 aaKnown RBP18.85■□□□□ 0.61
CIT-212ENST00000543239 LRRC41Q15345 812 aa18.85■□□□□ 0.61
CIT-212ENST00000543239 BLOC1S2Q6QNY1 142 aa18.85■□□□□ 0.61
CIT-212ENST00000543239 RNF180Q86T96 592 aa18.85■□□□□ 0.61
CIT-212ENST00000543239 SAMD3Q8N6K7 520 aa18.85■□□□□ 0.61
CIT-212ENST00000543239 FANCBQ8NB91 859 aa18.85■□□□□ 0.61
CIT-212ENST00000543239 TCEANC2Q96MN5 208 aa18.85■□□□□ 0.61
CIT-212ENST00000543239 USP26Q9BXU7 913 aa18.85■□□□□ 0.61
CIT-212ENST00000543239 VTA1Q9NP79 307 aa18.85■□□□□ 0.61
CIT-212ENST00000543239 MAP3K20Q9NYL2 800 aaKnown RBP18.85■□□□□ 0.61
CIT-212ENST00000543239 ADAMTS4O75173 837 aa18.84■□□□□ 0.61
CIT-212ENST00000543239 EDNRBP24530 442 aa18.84■□□□□ 0.61
CIT-212ENST00000543239 RCAN1P53805 252 aa18.84■□□□□ 0.61
CIT-212ENST00000543239 GJC2Q5T442 439 aaPredicted RBP18.84■□□□□ 0.61
CIT-212ENST00000543239 MICU3Q86XE3 530 aa18.84■□□□□ 0.61
CIT-212ENST00000543239 RRP36Q96EU6 259 aaKnown RBP18.84■□□□□ 0.61
CIT-212ENST00000543239 NR2E3Q9Y5X4 410 aa18.84■□□□□ 0.61
CIT-212ENST00000543239 SYNRGQ9UMZ2 1314 aa18.83■□□□□ 0.61
CIT-212ENST00000543239 OPLAHO14841 1288 aa18.83■□□□□ 0.6
CIT-212ENST00000543239 EVI5O60447 810 aa18.83■□□□□ 0.6
CIT-212ENST00000543239 PLEKHA8P1O95397 391 aa18.83■□□□□ 0.6
CIT-212ENST00000543239 PGK1P00558 417 aa18.83■□□□□ 0.6
CIT-212ENST00000543239 RXRAP19793 462 aa18.83■□□□□ 0.6
CIT-212ENST00000543239 HSD17B4P51659 736 aa18.83■□□□□ 0.6
CIT-212ENST00000543239 FBXL16Q8N461 479 aa18.83■□□□□ 0.6
CIT-212ENST00000543239 SYTL5Q8TDW5 730 aaPredicted RBP18.83■□□□□ 0.6
CIT-212ENST00000543239 TBC1D5Q92609 795 aa18.83■□□□□ 0.6
CIT-212ENST00000543239 LENG1Q96BZ8 264 aaPredicted RBP18.83■□□□□ 0.6
CIT-212ENST00000543239 RBM28Q9NW13 759 aaKnown RBP18.83■□□□□ 0.6
CIT-212ENST00000543239 SEC63Q9UGP8 760 aaKnown RBP18.83■□□□□ 0.6
CIT-212ENST00000543239 ZBTB43O43298 467 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 ADCY6O43306 1168 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 EIF5BO60841 1220 aaKnown RBP18.82■□□□□ 0.6
CIT-212ENST00000543239 CFBP00751 764 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 RPS6KB1P23443 525 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 FGD1P98174 961 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 PDE4DQ08499 809 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 IQSEC1Q6DN90 963 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 TAPT1Q6NXT6 567 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 TMTC3Q6ZXV5 915 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 FBXO16Q8IX29 292 aaPredicted RBP18.82■□□□□ 0.6
CIT-212ENST00000543239 SRBD1Q8N5C6 995 aaKnown RBP18.82■□□□□ 0.6
CIT-212ENST00000543239 NSUN6Q8TEA1 469 aaKnown RBP18.82■□□□□ 0.6
CIT-212ENST00000543239 SENP6Q9GZR1 1112 aaPredicted RBP18.82■□□□□ 0.6
CIT-212ENST00000543239 UPF3AQ9H1J1 476 aaKnown RBP18.82■□□□□ 0.6
CIT-212ENST00000543239 SPC25Q9HBM1 224 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 BRPF3Q9ULD4 1205 aa18.82■□□□□ 0.6
CIT-212ENST00000543239 DDX49Q9Y6V7 483 aaKnown RBP18.82■□□□□ 0.6
CIT-212ENST00000543239 ALPK3Q96L96 1907 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 KLF18A0A0U1RQI7 1052 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 MYCNP04198 464 aaPredicted RBP18.81■□□□□ 0.6
CIT-212ENST00000543239 CPA1P15085 419 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 CASTP20810 708 aaKnown RBP18.81■□□□□ 0.6
CIT-212ENST00000543239 CST5P28325 142 aaPredicted RBP18.81■□□□□ 0.6
CIT-212ENST00000543239 ADCYAP1R1P41586 468 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 GJA9P57773 515 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 NKX3-2P78367 333 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 TNFAIP2Q03169 654 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 EEPD1Q7L9B9 569 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 RAB11FIP4Q86YS3 637 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 IWS1Q96ST2 819 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 TSEN34Q9BSV6 310 aaKnown RBP18.81■□□□□ 0.6
CIT-212ENST00000543239 AGXT2Q9BYV1 514 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 PHF24Q9UPV7 400 aa18.81■□□□□ 0.6
CIT-212ENST00000543239 PPP2R5BQ15173 497 aa18.8■□□□□ 0.6
CIT-212ENST00000543239 RTN1Q16799 776 aa18.8■□□□□ 0.6
CIT-212ENST00000543239 Q6ZUG5 572 aa18.8■□□□□ 0.6
CIT-212ENST00000543239 KLHDC9Q8NEP7 349 aa18.8■□□□□ 0.6
CIT-212ENST00000543239 PIBF1Q8WXW3 757 aa18.8■□□□□ 0.6
CIT-212ENST00000543239 TAAR1Q96RJ0 339 aa18.8■□□□□ 0.6
CIT-212ENST00000543239 RMDN3Q96TC7 470 aa18.8■□□□□ 0.6
CIT-212ENST00000543239 TM6SF1Q9BZW5 370 aa18.8■□□□□ 0.6
CIT-212ENST00000543239 GNEQ9Y223 722 aaKnown RBP18.8■□□□□ 0.6
CIT-212ENST00000543239 Q9Y3F1 56 aa18.8■□□□□ 0.6
CIT-212ENST00000543239 BAZ2BQ9UIF8 2168 aaKnown RBP18.79■□□□□ 0.6
CIT-212ENST00000543239 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.79■□□□□ 0.6
CIT-212ENST00000543239 RBM47A0AV96 593 aaKnown RBP18.79■□□□□ 0.6
CIT-212ENST00000543239 MOXD2PA6NHM9 499 aa18.79■□□□□ 0.6
CIT-212ENST00000543239 GOLGA8AA7E2F4 631 aa18.79■□□□□ 0.6
CIT-212ENST00000543239 GOLGA8BA8MQT2 603 aa18.79■□□□□ 0.6
CIT-212ENST00000543239 H0YGN5 161 aa18.79■□□□□ 0.6
CIT-212ENST00000543239 GCOM1H8Y6P7 765 aaPredicted RBP18.79■□□□□ 0.6
CIT-212ENST00000543239 C6orf222P0C671 652 aaPredicted RBP18.79■□□□□ 0.6
CIT-212ENST00000543239 POLR2MP0CAP2 368 aa18.79■□□□□ 0.6
CIT-212ENST00000543239 LRRC26Q2I0M4 334 aa18.79■□□□□ 0.6
CIT-212ENST00000543239 CCSAPQ6IQ19 270 aaPredicted RBP18.79■□□□□ 0.6
CIT-212ENST00000543239 RUFY3Q7L099 469 aa18.79■□□□□ 0.6
CIT-212ENST00000543239 BRF1Q92994 677 aa18.79■□□□□ 0.6
CIT-212ENST00000543239 ZSWIM6Q9HCJ5 1215 aa18.79■□□□□ 0.6
CIT-212ENST00000543239 PDGFCQ9NRA1 345 aa18.79■□□□□ 0.6
CIT-212ENST00000543239 SMPD1P17405 629 aa18.78■□□□□ 0.6
CIT-212ENST00000543239 DUSP28Q4G0W2 176 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms