RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 ADD2P35612 726 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 PLA2G4AP47712 749 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 RGS3P49796 1198 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 CACNB3P54284 484 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 UBE3CQ15386 1083 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 TTC22Q5TAA0 569 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 ADGRA1Q86SQ6 560 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 MIGA1Q8NAN2 632 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 NIFKQ9BYG3 293 aaKnown RBP6.08□□□□□ -1.44
CLIP1-217ENST00000543205 GLIS2Q9BZE0 524 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-217ENST00000543205 SPC25Q9HBM1 224 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 VTI1BQ9UEU0 232 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 DNMT3LQ9UJW3 386 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 ZNF232Q9UNY5 417 aa6.08□□□□□ -1.44
CLIP1-217ENST00000543205 SCAF8Q9UPN6 1271 aaKnown RBP6.08□□□□□ -1.44
CLIP1-217ENST00000543205 ADM5C9JUS6 153 aa6.07□□□□□ -1.44
CLIP1-217ENST00000543205 K7ELQ4 463 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-217ENST00000543205 ENPP3O14638 875 aa6.07□□□□□ -1.44
CLIP1-217ENST00000543205 TREHO43280 583 aa6.07□□□□□ -1.44
CLIP1-217ENST00000543205 RHOQP17081 205 aa6.07□□□□□ -1.44
CLIP1-217ENST00000543205 PHKA2P46019 1235 aa6.07□□□□□ -1.44
CLIP1-217ENST00000543205 POU4F2Q12837 409 aa6.07□□□□□ -1.44
CLIP1-217ENST00000543205 C4orf17Q53FE4 359 aa6.07□□□□□ -1.44
CLIP1-217ENST00000543205 FAM43BQ6ZT52 329 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-217ENST00000543205 RAVER1Q8IY67 606 aaKnown RBP6.07□□□□□ -1.44
CLIP1-217ENST00000543205 TEX11Q8IYF3 940 aa6.07□□□□□ -1.44
CLIP1-217ENST00000543205 SH3RF3Q8TEJ3 882 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-217ENST00000543205 RNPC3Q96LT9 517 aaKnown RBP6.07□□□□□ -1.44
CLIP1-217ENST00000543205 DEFB129Q9H1M3 183 aa6.07□□□□□ -1.44
CLIP1-217ENST00000543205 NXF1Q9UBU9 619 aaKnown RBP6.07□□□□□ -1.44
CLIP1-217ENST00000543205 PPP2R3BQ9Y5P8 575 aa6.07□□□□□ -1.44
CLIP1-217ENST00000543205 TCRBV5S4A2TA0A5A2 114 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 SERTM1A2A2V5 107 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 SOBPA7XYQ1 873 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 SPATA31C2B4DYI2 1134 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 TRAF5O00463 557 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 STK10O94804 968 aaKnown RBP6.06□□□□□ -1.44
CLIP1-217ENST00000543205 PDGFRBP09619 1106 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 NF2P35240 595 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 USP5P45974 858 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 DYNLL1P63167 89 aaKnown RBP6.06□□□□□ -1.44
CLIP1-217ENST00000543205 TCP10Q12799 353 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 PICALMQ13492 652 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 RASA3Q14644 834 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 FKBP1CQ5VVH2 108 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 SKAP1Q86WV1 359 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 AIDAQ96BJ3 306 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 ZNF408Q9H9D4 720 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 HIP1O00291 1037 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 ENTPD3O75355 529 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 MBD4O95243 580 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 CELF2O95319 508 aaKnown RBP6.06□□□□□ -1.44
CLIP1-217ENST00000543205 CHGBP05060 677 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 GSPT1P15170 499 aaKnown RBP6.06□□□□□ -1.44
CLIP1-217ENST00000543205 MAPK8P45983 427 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 DAB2P98082 770 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 NFIAQ12857 509 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 TEAD4Q15561 434 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.06□□□□□ -1.44
CLIP1-217ENST00000543205 SUPT20HL1Q3ZLR7 823 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 PRAMEF18Q5VWM3 479 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 DLK2Q6UY11 383 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 FAM83AQ86UY5 434 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 ZDHHC1Q8WTX9 485 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 TGFBRAP1Q8WUH2 860 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 APPBP2Q92624 585 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 CDCA5Q96FF9 252 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 IDI2Q9BXS1 227 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 CRNKL1Q9BZJ0 848 aaKnown RBP6.06□□□□□ -1.44
CLIP1-217ENST00000543205 TMEM39BQ9GZU3 492 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 PUS7LQ9H0K6 701 aaKnown RBP6.06□□□□□ -1.44
CLIP1-217ENST00000543205 ARMT1Q9H993 441 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 DIAPH3Q9NSV4 1193 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 ADAMTSL1Q8N6G6 1762 aa6.06□□□□□ -1.44
CLIP1-217ENST00000543205 PASKQ96RG2 1323 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 MAST2Q6P0Q8 1798 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 MYH2Q9UKX2 1941 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 CCDC189A1A4V9 331 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 WDHD1O75717 1129 aaPredicted RBP6.05□□□□□ -1.44
CLIP1-217ENST00000543205 SDSP20132 328 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 NOS2P35228 1153 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 MAP9Q49MG5 647 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 ZMYM1Q5SVZ6 1142 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 MAPKAPK5Q8IW41 473 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 CCAR1Q8IX12 1150 aaKnown RBP6.05□□□□□ -1.44
CLIP1-217ENST00000543205 LCORLQ8N3X6 602 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 FAM151AQ8WW52 585 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 OSBP2Q969R2 916 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 HOOK2Q96ED9 719 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 MRFAP1L1Q96HT8 127 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 RIOK1Q9BRS2 568 aaKnown RBP6.05□□□□□ -1.44
CLIP1-217ENST00000543205 C2orf49Q9BVC5 232 aaPredicted RBP6.05□□□□□ -1.44
CLIP1-217ENST00000543205 HELLSQ9NRZ9 838 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 DDX41Q9UJV9 622 aaKnown RBP6.05□□□□□ -1.44
CLIP1-217ENST00000543205 CNTNAP1P78357 1384 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 RFX7Q2KHR2 1363 aa6.05□□□□□ -1.44
CLIP1-217ENST00000543205 M0R2C6 588 aa6.04□□□□□ -1.44
CLIP1-217ENST00000543205 EML1O00423 815 aa6.04□□□□□ -1.44
CLIP1-217ENST00000543205 PRC1O43663 620 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms